Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6207.t1
Gene name
Locationscaffold_16:230494..231268
Strand+
Gene length (bp)774
Transcript length (bp)705
Coding sequence length (bp)705
Protein length (aa) 235

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04622 ERG2_Sigma1R ERG2 and Sigma1 receptor like protein 1.5E-97 28 232

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 23 40 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6207.t1
MPSKSSKSSSSGCRCRCFSLKSLSYLAIFLALFSAVYRYLDARLEQFYIFDPVHLHDVSQRAISAHGEDTRSVVN
FIVAELEQKVGPNYLSTQEEWVFNNAGGAMGAMYVIHASITEYLIIFGTAIGTEGHTGRHTADDYFHILQGTQLA
YSPGEFKPEVYPAGSVHHLVRGEVKQYKMDESCFALEYARGWIPPMLFFGYADTFSSTLDFPTLWATTRITAREM
VGNLLQLKL*
Coding >Pro_DTO377G3_2|g6207.t1
ATGCCTTCTAAATCCTCAAAGTCTTCCAGCTCCGGCTGCCGCTGTCGCTGCTTCTCCCTGAAGAGCCTCAGCTAC
CTGGCTATCTTCCTGGCTCTATTCTCCGCCGTCTACCGATACCTTGATGCGCGCCTGGAGCAATTCTACATCTTC
GACCCGGTGCACCTACACGATGTATCTCAGCGCGCTATCAGCGCCCACGGCGAAGACACCCGCTCTGTCGTCAAC
TTTATCGTCGCCGAGCTGGAGCAAAAAGTCGGTCCCAACTACCTAAGCACCCAGGAGGAGTGGGTTTTCAACAAC
GCCGGCGGCGCCATGGGCGCTATGTACGTGATTCATGCTAGTATCACAGAGTACCTAATCATCTTCGGCACCGCT
ATCGGAACCGAAGGCCACACCGGCCGCCACACCGCCGACGACTACTTCCACATCCTTCAGGGCACCCAGCTCGCC
TACTCCCCCGGAGAGTTCAAGCCGGAGGTCTACCCGGCCGGCAGTGTGCACCACCTAGTCCGCGGCGAGGTCAAG
CAGTACAAGATGGATGAATCTTGCTTCGCGCTCGAGTACGCCCGTGGCTGGATCCCCCCCATGCTCTTCTTCGGT
TACGCCGATACCTTCTCCAGCACCCTGGACTTCCCGACGTTATGGGCTACCACGCGCATCACAGCCCGAGAGATG
GTCGGCAACTTGTTACAGTTGAAGCTATAA
Transcript >Pro_DTO377G3_2|g6207.t1
ATGCCTTCTAAATCCTCAAAGTCTTCCAGCTCCGGCTGCCGCTGTCGCTGCTTCTCCCTGAAGAGCCTCAGCTAC
CTGGCTATCTTCCTGGCTCTATTCTCCGCCGTCTACCGATACCTTGATGCGCGCCTGGAGCAATTCTACATCTTC
GACCCGGTGCACCTACACGATGTATCTCAGCGCGCTATCAGCGCCCACGGCGAAGACACCCGCTCTGTCGTCAAC
TTTATCGTCGCCGAGCTGGAGCAAAAAGTCGGTCCCAACTACCTAAGCACCCAGGAGGAGTGGGTTTTCAACAAC
GCCGGCGGCGCCATGGGCGCTATGTACGTGATTCATGCTAGTATCACAGAGTACCTAATCATCTTCGGCACCGCT
ATCGGAACCGAAGGCCACACCGGCCGCCACACCGCCGACGACTACTTCCACATCCTTCAGGGCACCCAGCTCGCC
TACTCCCCCGGAGAGTTCAAGCCGGAGGTCTACCCGGCCGGCAGTGTGCACCACCTAGTCCGCGGCGAGGTCAAG
CAGTACAAGATGGATGAATCTTGCTTCGCGCTCGAGTACGCCCGTGGCTGGATCCCCCCCATGCTCTTCTTCGGT
TACGCCGATACCTTCTCCAGCACCCTGGACTTCCCGACGTTATGGGCTACCACGCGCATCACAGCCCGAGAGATG
GTCGGCAACTTGTTACAGTTGAAGCTATAA
Gene >Pro_DTO377G3_2|g6207.t1
ATGCCTTCTAAATCCTCAAAGTCTTCCAGCTCCGGCTGCCGCTGTCGCTGCTTCTCCCTGAAGAGCCTCAGCTAC
CTGGCTATCTTCCTGGCTCTATTCTCCGCCGTCTACCGATACCTTGATGCGCGCCTGGAGCAATTCTACATCTTC
GACCCGGTGCACCTACACGATGTATCTCAGCGCGCTATCAGCGCCCACGGCGAAGACACCCGCTCTGTCGTCAAC
TTTATCGTCGCCGAGCTGGAGCAAAAAGTCGGTCCCAACTACCTAAGCACCCAGGAGGAGTGGGTTTTCAACAAC
GCCGGCGGCGCCATGGGCGCTATGTACGTGATTCATGCTAGTATCACAGAGTACCTAATCATCTTCGGTGAGTTT
CGCGCCCGCGATCAAGTCTACTGCATTCCTTTTCCCTTCTAATCGCATTCAATCTTCGCAGGCACCGCTATCGGA
ACCGAAGGCCACACCGGCCGCCACACCGCCGACGACTACTTCCACATCCTTCAGGGCACCCAGCTCGCCTACTCC
CCCGGAGAGTTCAAGCCGGAGGTCTACCCGGCCGGCAGTGTGCACCACCTAGTCCGCGGCGAGGTCAAGCAGTAC
AAGATGGATGAATCTTGCTTCGCGCTCGAGTACGCCCGTGGCTGGATCCCCCCCATGCTCTTCTTCGGTTACGCC
GATACCTTCTCCAGCACCCTGGACTTCCCGACGTTATGGGCTACCACGCGCATCACAGCCCGAGAGATGGTCGGC
AACTTGTTACAGTTGAAGCTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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