Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6201.t1
Gene name
Locationscaffold_16:215694..216622
Strand-
Gene length (bp)928
Transcript length (bp)879
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14748 P5CR_dimer Pyrroline-5-carboxylate reductase dimerisation 3.2E-20 189 287
PF03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent 3.4E-14 7 118

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6201.t1
MASGQTLGFIGCGNMGGAVLKGLLNSVFSATSTDPTPNPITRFIACTKTASSASRLEKTIAPEHQQLIKIVSDQT
VQTMQEADVIILGCKPFMAEAVLREEGVRDALAGKLVISMLAGQSCETLTRLINPDPGAADQPHLMKAIPNMGAQ
FGQSMTIIETPAPSIPPAMVLVTEWIFKHVGAVKYLGAEQIGLATVLVGATMATLTLPIEGLLDGCVAEGFKRAD
AMELVLQGIRGLSAVLESGQHPAVVRESISSPRGCTIQTLLSLEKAGTRSDFAEAIVRGNTHLKEKM*
Coding >Pro_DTO377G3_2|g6201.t1
ATGGCCTCAGGACAGACTCTTGGATTCATCGGATGCGGTAACATGGGAGGCGCCGTGCTTAAAGGCCTCCTAAAC
AGCGTATTCTCAGCCACAAGCACTGACCCAACACCAAATCCTATAACTCGCTTTATCGCCTGCACAAAAACAGCC
AGTTCCGCATCCCGTCTCGAAAAAACAATTGCCCCCGAGCACCAACAACTAATCAAAATCGTCTCTGACCAAACC
GTCCAAACAATGCAAGAAGCCGACGTAATCATCCTCGGCTGCAAGCCCTTCATGGCCGAAGCCGTTCTAAGAGAA
GAAGGCGTCCGTGACGCCCTCGCTGGGAAACTCGTCATCAGCATGCTCGCAGGCCAATCATGCGAAACCCTAACC
CGCCTCATCAACCCAGATCCCGGCGCTGCAGATCAACCGCACCTCATGAAAGCTATCCCAAACATGGGCGCGCAG
TTCGGCCAGTCGATGACGATCATCGAAACGCCGGCGCCGTCAATCCCACCAGCCATGGTTCTGGTTACGGAGTGG
ATTTTCAAGCATGTCGGTGCGGTTAAGTACCTAGGAGCTGAGCAGATCGGGTTGGCGACTGTGCTTGTTGGCGCG
ACGATGGCGACGTTGACGCTGCCGATTGAGGGGTTGCTGGATGGATGTGTTGCGGAGGGGTTTAAGCGGGCGGAT
GCGATGGAGTTGGTTTTGCAGGGGATCAGGGGATTGTCTGCTGTGTTGGAGTCTGGACAGCATCCAGCGGTTGTT
AGGGAGAGTATTTCCTCGCCGAGGGGGTGTACTATTCAGACACTTTTGAGTCTTGAGAAGGCCGGGACGAGGTCA
GATTTTGCTGAGGCGATTGTTAGAGGGAATACACATTTGAAGGAGAAGATGTAG
Transcript >Pro_DTO377G3_2|g6201.t1
ATGGCCTCAGGACAGACTCTTGGATTCATCGGATGCGGTAACATGGGAGGCGCCGTGCTTAAAGGCCTCCTAAAC
AGCGTATTCTCAGCCACAAGCACTGACCCAACACCAAATCCTATAACTCGCTTTATCGCCTGCACAAAAACAGCC
AGTTCCGCATCCCGTCTCGAAAAAACAATTGCCCCCGAGCACCAACAACTAATCAAAATCGTCTCTGACCAAACC
GTCCAAACAATGCAAGAAGCCGACGTAATCATCCTCGGCTGCAAGCCCTTCATGGCCGAAGCCGTTCTAAGAGAA
GAAGGCGTCCGTGACGCCCTCGCTGGGAAACTCGTCATCAGCATGCTCGCAGGCCAATCATGCGAAACCCTAACC
CGCCTCATCAACCCAGATCCCGGCGCTGCAGATCAACCGCACCTCATGAAAGCTATCCCAAACATGGGCGCGCAG
TTCGGCCAGTCGATGACGATCATCGAAACGCCGGCGCCGTCAATCCCACCAGCCATGGTTCTGGTTACGGAGTGG
ATTTTCAAGCATGTCGGTGCGGTTAAGTACCTAGGAGCTGAGCAGATCGGGTTGGCGACTGTGCTTGTTGGCGCG
ACGATGGCGACGTTGACGCTGCCGATTGAGGGGTTGCTGGATGGATGTGTTGCGGAGGGGTTTAAGCGGGCGGAT
GCGATGGAGTTGGTTTTGCAGGGGATCAGGGGATTGTCTGCTGTGTTGGAGTCTGGACAGCATCCAGCGGTTGTT
AGGGAGAGTATTTCCTCGCCGAGGGGGTGTACTATTCAGACACTTTTGAGTCTTGAGAAGGCCGGGACGAGGTCA
GATTTTGCTGAGGCGATTGTTAGAGGGAATACACATTTGAAGGAGAAGATGTAG
Gene >Pro_DTO377G3_2|g6201.t1
ATGGCCTCAGGACAGACTCTTGGATTCATCGGATGCGGTAAGTAAACATAACATTCATAGTAAAACTACCACTAA
CAAACCCCAAGGTAACATGGGAGGCGCCGTGCTTAAAGGCCTCCTAAACAGCGTATTCTCAGCCACAAGCACTGA
CCCAACACCAAATCCTATAACTCGCTTTATCGCCTGCACAAAAACAGCCAGTTCCGCATCCCGTCTCGAAAAAAC
AATTGCCCCCGAGCACCAACAACTAATCAAAATCGTCTCTGACCAAACCGTCCAAACAATGCAAGAAGCCGACGT
AATCATCCTCGGCTGCAAGCCCTTCATGGCCGAAGCCGTTCTAAGAGAAGAAGGCGTCCGTGACGCCCTCGCTGG
GAAACTCGTCATCAGCATGCTCGCAGGCCAATCATGCGAAACCCTAACCCGCCTCATCAACCCAGATCCCGGCGC
TGCAGATCAACCGCACCTCATGAAAGCTATCCCAAACATGGGCGCGCAGTTCGGCCAGTCGATGACGATCATCGA
AACGCCGGCGCCGTCAATCCCACCAGCCATGGTTCTGGTTACGGAGTGGATTTTCAAGCATGTCGGTGCGGTTAA
GTACCTAGGAGCTGAGCAGATCGGGTTGGCGACTGTGCTTGTTGGCGCGACGATGGCGACGTTGACGCTGCCGAT
TGAGGGGTTGCTGGATGGATGTGTTGCGGAGGGGTTTAAGCGGGCGGATGCGATGGAGTTGGTTTTGCAGGGGAT
CAGGGGATTGTCTGCTGTGTTGGAGTCTGGACAGCATCCAGCGGTTGTTAGGGAGAGTATTTCCTCGCCGAGGGG
GTGTACTATTCAGACACTTTTGAGTCTTGAGAAGGCCGGGACGAGGTCAGATTTTGCTGAGGCGATTGTTAGAGG
GAATACACATTTGAAGGAGAAGATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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