Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6176.t1
Gene name
Locationscaffold_16:151877..153013
Strand+
Gene length (bp)1136
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00180 Iso_dh Isocitrate/isopropylmalate dehydrogenase 3.4E-89 9 350

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6176.t1
MAPKNSYRIASIPGDGIGLEVVSATIQVVEKLAKILGTFKIDFEHIPWGTEYYKQTGRYVSEDYLDTIRQYDAVL
FGAVGSPDVPDHISLWGLLLALRGPLQLYANVRPVRTFPGTKCPLNTATEGIDWMLVRENSEGEYAGQGGRSHVG
QQWEVATEVAIFTRVGIERIMRFAFETAQSRPRKLLTVVTKSNSMRNGMVLWDEIAELVAKDFPDVTWDKMLVDA
MTVRMVAKPQSIDTIVGTNLHMDILSDLAAALAGSIGVAPSSNLDPTRKNPSIFEPVHGSAFDITGKGVANPVAT
FWSAAEMLVWIGEKDAAAQLMGCVERVCAAGILTPDLGGTSNTQGIVDAVCLEIEKL*
Coding >Pro_DTO377G3_2|g6176.t1
ATGGCACCAAAGAATTCATACCGCATTGCCTCTATCCCAGGCGATGGCATTGGTCTCGAGGTAGTCAGTGCTACA
ATCCAGGTCGTCGAGAAACTCGCAAAGATCCTTGGCACATTCAAGATCGACTTTGAGCATATCCCGTGGGGAACC
GAGTACTACAAGCAAACCGGACGATATGTGTCTGAAGATTACCTTGACACCATACGCCAGTACGATGCGGTATTA
TTCGGTGCCGTTGGATCACCCGACGTGCCCGATCACATCTCGCTCTGGGGCCTACTCCTGGCCCTCCGCGGCCCA
CTCCAGCTATACGCCAACGTACGACCAGTTCGAACTTTCCCTGGAACCAAATGCCCTCTCAACACCGCAACCGAA
GGCATCGACTGGATGCTCGTACGGGAAAACTCCGAAGGCGAGTATGCCGGGCAAGGCGGACGGTCTCACGTTGGA
CAGCAATGGGAAGTCGCGACGGAAGTGGCAATATTCACGCGCGTGGGAATCGAGCGAATTATGCGATTCGCATTT
GAGACAGCGCAGTCGCGGCCGCGTAAGCTTCTGACCGTTGTCACAAAAAGCAACTCGATGCGCAACGGGATGGTT
CTGTGGGATGAAATTGCGGAATTGGTTGCGAAGGACTTCCCCGATGTGACCTGGGATAAGATGCTTGTTGATGCG
ATGACTGTTCGTATGGTGGCGAAGCCGCAGTCAATCGATACGATTGTCGGGACGAACTTGCATATGGATATTTTG
TCTGATCTTGCTGCTGCATTGGCGGGATCTATCGGTGTTGCGCCTTCCAGTAACTTGGATCCTACACGCAAGAAT
CCGTCGATTTTTGAGCCTGTCCATGGTAGTGCTTTTGATATTACTGGGAAAGGGGTTGCGAATCCCGTTGCTACC
TTTTGGTCGGCGGCGGAGATGCTTGTCTGGATTGGTGAGAAGGATGCTGCTGCCCAGCTGATGGGTTGTGTGGAG
CGTGTCTGTGCTGCAGGGATTCTGACTCCTGATCTGGGGGGAACATCTAACACTCAAGGGATTGTGGATGCTGTT
TGCCTGGAGATTGAGAAGTTGTGA
Transcript >Pro_DTO377G3_2|g6176.t1
ATGGCACCAAAGAATTCATACCGCATTGCCTCTATCCCAGGCGATGGCATTGGTCTCGAGGTAGTCAGTGCTACA
ATCCAGGTCGTCGAGAAACTCGCAAAGATCCTTGGCACATTCAAGATCGACTTTGAGCATATCCCGTGGGGAACC
GAGTACTACAAGCAAACCGGACGATATGTGTCTGAAGATTACCTTGACACCATACGCCAGTACGATGCGGTATTA
TTCGGTGCCGTTGGATCACCCGACGTGCCCGATCACATCTCGCTCTGGGGCCTACTCCTGGCCCTCCGCGGCCCA
CTCCAGCTATACGCCAACGTACGACCAGTTCGAACTTTCCCTGGAACCAAATGCCCTCTCAACACCGCAACCGAA
GGCATCGACTGGATGCTCGTACGGGAAAACTCCGAAGGCGAGTATGCCGGGCAAGGCGGACGGTCTCACGTTGGA
CAGCAATGGGAAGTCGCGACGGAAGTGGCAATATTCACGCGCGTGGGAATCGAGCGAATTATGCGATTCGCATTT
GAGACAGCGCAGTCGCGGCCGCGTAAGCTTCTGACCGTTGTCACAAAAAGCAACTCGATGCGCAACGGGATGGTT
CTGTGGGATGAAATTGCGGAATTGGTTGCGAAGGACTTCCCCGATGTGACCTGGGATAAGATGCTTGTTGATGCG
ATGACTGTTCGTATGGTGGCGAAGCCGCAGTCAATCGATACGATTGTCGGGACGAACTTGCATATGGATATTTTG
TCTGATCTTGCTGCTGCATTGGCGGGATCTATCGGTGTTGCGCCTTCCAGTAACTTGGATCCTACACGCAAGAAT
CCGTCGATTTTTGAGCCTGTCCATGGTAGTGCTTTTGATATTACTGGGAAAGGGGTTGCGAATCCCGTTGCTACC
TTTTGGTCGGCGGCGGAGATGCTTGTCTGGATTGGTGAGAAGGATGCTGCTGCCCAGCTGATGGGTTGTGTGGAG
CGTGTCTGTGCTGCAGGGATTCTGACTCCTGATCTGGGGGGAACATCTAACACTCAAGGGATTGTGGATGCTGTT
TGCCTGGAGATTGAGAAGTTGTGA
Gene >Pro_DTO377G3_2|g6176.t1
ATGGCACCAAAGAATTCATACCGCATTGCCTCTATCCCAGGCGATGGCATTGGTCTCGAGGTAGTCAGTGCTACA
ATCCAGGTCGTCGAGAAACTCGCAAAGATCCTTGGCACATTCAAGATCGACTTTGAGCATATCCCGTGGGGAACC
GAGTACTACAAGCAAACCGGACGATATGTGTCTGAAGATTACCTTGACACCATACGCCAGTACGATGCGGTATTA
TTCGGTGCCGTTGGATCACCCGGTATGTTTTCTATATTGCATAGCATCATGCCGACTACCAAGCAAAAATATTAA
CACAAACAGACGTGCCCGATCACATCTCGCTCTGGGGCCTACTCCTGGCCCTCCGCGGCCCACTCCAGCTATACG
CCAACGTACGACCAGTTCGAACTTTCCCTGGAACCAAATGCCCTCTCAACACCGCAACCGAAGGCATCGACTGGA
TGCTCGTACGGGAAAACTCCGAAGGCGAGTATGCCGGGCAAGGCGGACGGTCTCACGTTGGACAGCAATGGGAAG
TCGCGACGGAAGTGGCAATATTCACGCGCGTGGGAATCGAGCGAATTATGCGATTCGCATTTGAGACAGCGCAGT
CGCGGCCGCGTAAGCTTCTGACCGTTGTCACAAAAAGCAACTCGATGCGCAACGGGATGGTTCTGTGGGATGAAA
TTGCGGAATTGGTTGCGAAGGACTTCCCCGATGTGACCTGGGATAAGATGCTTGTTGATGCGATGACTGTTCGTA
TGGTGGCGAAGCCGCAGTCAATCGATACGATTGTCGGGACGAACTTGCATATGGATATTTTGTCTGATCTTGCTG
CTGCATTGGCGGGATCTATCGGTGTTGCGCCTTCCAGTAACTTGGATCCTACACGCAAGAATCCGTCGATTTTTG
AGCCTGTCCATGGTAGTGCTTTTGATATTACTGGGAAAGGGGTTGCGAATCCCGTTGCTACCTTTTGGTCGGCGG
CGGAGATGCTTGTCTGGATTGGTGAGAAGGATGCTGCTGCCCAGCTGATGGGTTGTGTGGAGCGTGTCTGTGCTG
CAGGGATTCTGACTCCTGATCTGGGGGGAACATCTAACACTCAAGGGATTGTGGATGCTGTTTGCCTGGAGATTG
AGAAGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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