© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g6174.t1 |
| Gene name | |
| Location | scaffold_16:144705..146300 |
| Strand | + |
| Gene length (bp) | 1595 |
| Transcript length (bp) | 1533 |
| Coding sequence length (bp) | 1533 |
| Protein length (aa) | 511 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.4E-99 | 18 | 466 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.7E-27 | 22 | 387 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 50 | 72 | 22 |
| 3 | 84 | 103 | 19 |
| 4 | 108 | 130 | 22 |
| 5 | 142 | 164 | 22 |
| 6 | 174 | 196 | 22 |
| 7 | 267 | 289 | 22 |
| 8 | 304 | 326 | 22 |
| 9 | 335 | 357 | 22 |
| 10 | 367 | 389 | 22 |
| 11 | 401 | 423 | 22 |
| 12 | 433 | 452 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6174.t1 MFFQNAQGKWLQYRITAACGAGFLLFGYDQGVFGGLLDNEPFLETFGNPGVTIQGQIVATYDIGCIIGTLVTMFA GDKLGRRRTILIGCCILIVGAILQTASYSLAQMIVGRVVAGVGNGMNTIAIPIWQSETARAEHRGKLIVAQLVTN IFGIVITNWMNYGFTFIPHSAVSWRFPLGFQCFFALVTLAFVIVAPESPRWLVMKHRGSEAREILARLLAKPIDD QEVVDEIQNLEIAVNHETEVQQSKPLQAIFKRNNKQQTLRRILLGAGTAFFQQVGGTNVIAYYLPVVLTRSVGLD NRMALILSAVDSMSLMFWGCIAALLIDRIGRKRLMLFGAAGSSVCFALVAVGLRYGGPDNKGMSVLAVVFIFVYY VFYGMSLLSIPYIYPAEINSQQMRNIGTSFATTTNWLFVYVIVVATPTAIANIQWKYYMLFAIFNFCFLPIIWHF YVETANLSLEQIDRLFEIKHEAGKAISWSEATMIARTEVISDLAHTEKENLDAEHYEIAA* |
| Coding | >Pro_DTO377G3_2|g6174.t1 ATGTTTTTCCAGAATGCACAAGGGAAATGGCTTCAATACAGAATCACTGCAGCCTGCGGTGCCGGTTTCCTCCTC TTTGGCTATGACCAGGGAGTCTTCGGCGGGCTTCTGGACAATGAGCCGTTCCTCGAGACCTTTGGAAATCCGGGC GTGACCATCCAAGGTCAAATTGTTGCGACTTATGACATTGGCTGCATAATAGGCACTCTGGTGACGATGTTCGCT GGAGACAAACTCGGACGAAGACGGACAATTCTGATCGGGTGCTGCATCCTGATCGTCGGCGCTATTCTCCAAACT GCATCCTATTCCCTTGCGCAGATGATTGTCGGTCGTGTCGTTGCGGGAGTTGGAAATGGAATGAACACAATTGCT ATTCCTATTTGGCAATCAGAAACTGCACGGGCAGAGCACCGTGGAAAACTCATCGTTGCACAGTTGGTAACGAAT ATTTTCGGCATCGTCATCACAAATTGGATGAACTACGGATTCACTTTCATTCCTCACTCTGCCGTGAGCTGGCGA TTCCCTCTGGGCTTCCAATGTTTCTTCGCGCTTGTCACTCTCGCTTTTGTTATTGTCGCCCCGGAGTCACCGCGT TGGCTGGTCATGAAACACCGTGGCAGCGAAGCCCGTGAAATCCTAGCACGGCTCCTTGCAAAGCCAATTGACGAC CAGGAAGTGGTGGATGAGATACAAAATTTGGAAATAGCCGTGAACCATGAAACCGAAGTCCAACAATCGAAGCCT TTGCAGGCAATCTTCAAGCGCAATAACAAGCAACAGACATTGCGCAGGATTCTTCTTGGAGCTGGTACTGCCTTT TTTCAACAAGTTGGTGGAACGAACGTCATTGCATACTATCTACCAGTGGTTCTGACCCGATCAGTTGGGTTGGAC AACAGAATGGCCCTGATCTTGTCGGCCGTTGACTCTATGTCGCTAATGTTTTGGGGATGTATTGCAGCCCTGCTC ATTGACCGCATTGGCCGAAAGAGATTGATGCTCTTCGGTGCCGCTGGTAGCAGCGTCTGCTTTGCGCTTGTTGCC GTTGGACTGCGGTATGGTGGACCCGACAACAAGGGTATGTCTGTTCTAGCCGTGGTGTTCATCTTCGTCTACTAC GTCTTCTACGGCATGTCGCTCTTATCGATCCCGTATATCTATCCGGCAGAGATCAACTCCCAGCAAATGCGCAAT ATTGGCACTTCATTTGCGACCACTACCAACTGGTTATTCGTTTATGTTATCGTTGTTGCCACCCCAACAGCCATC GCAAACATCCAGTGGAAGTATTATATGCTTTTTGCCATATTCAACTTCTGTTTCCTGCCAATCATCTGGCACTTC TATGTTGAGACCGCCAACCTGTCTCTTGAGCAGATTGACAGACTCTTTGAGATTAAACATGAGGCTGGGAAAGCA ATTAGCTGGTCGGAGGCAACCATGATAGCCCGTACAGAGGTCATTTCCGATTTGGCACACACCGAAAAGGAAAAT CTTGATGCTGAGCACTATGAGATTGCGGCTTGA |
| Transcript | >Pro_DTO377G3_2|g6174.t1 ATGTTTTTCCAGAATGCACAAGGGAAATGGCTTCAATACAGAATCACTGCAGCCTGCGGTGCCGGTTTCCTCCTC TTTGGCTATGACCAGGGAGTCTTCGGCGGGCTTCTGGACAATGAGCCGTTCCTCGAGACCTTTGGAAATCCGGGC GTGACCATCCAAGGTCAAATTGTTGCGACTTATGACATTGGCTGCATAATAGGCACTCTGGTGACGATGTTCGCT GGAGACAAACTCGGACGAAGACGGACAATTCTGATCGGGTGCTGCATCCTGATCGTCGGCGCTATTCTCCAAACT GCATCCTATTCCCTTGCGCAGATGATTGTCGGTCGTGTCGTTGCGGGAGTTGGAAATGGAATGAACACAATTGCT ATTCCTATTTGGCAATCAGAAACTGCACGGGCAGAGCACCGTGGAAAACTCATCGTTGCACAGTTGGTAACGAAT ATTTTCGGCATCGTCATCACAAATTGGATGAACTACGGATTCACTTTCATTCCTCACTCTGCCGTGAGCTGGCGA TTCCCTCTGGGCTTCCAATGTTTCTTCGCGCTTGTCACTCTCGCTTTTGTTATTGTCGCCCCGGAGTCACCGCGT TGGCTGGTCATGAAACACCGTGGCAGCGAAGCCCGTGAAATCCTAGCACGGCTCCTTGCAAAGCCAATTGACGAC CAGGAAGTGGTGGATGAGATACAAAATTTGGAAATAGCCGTGAACCATGAAACCGAAGTCCAACAATCGAAGCCT TTGCAGGCAATCTTCAAGCGCAATAACAAGCAACAGACATTGCGCAGGATTCTTCTTGGAGCTGGTACTGCCTTT TTTCAACAAGTTGGTGGAACGAACGTCATTGCATACTATCTACCAGTGGTTCTGACCCGATCAGTTGGGTTGGAC AACAGAATGGCCCTGATCTTGTCGGCCGTTGACTCTATGTCGCTAATGTTTTGGGGATGTATTGCAGCCCTGCTC ATTGACCGCATTGGCCGAAAGAGATTGATGCTCTTCGGTGCCGCTGGTAGCAGCGTCTGCTTTGCGCTTGTTGCC GTTGGACTGCGGTATGGTGGACCCGACAACAAGGGTATGTCTGTTCTAGCCGTGGTGTTCATCTTCGTCTACTAC GTCTTCTACGGCATGTCGCTCTTATCGATCCCGTATATCTATCCGGCAGAGATCAACTCCCAGCAAATGCGCAAT ATTGGCACTTCATTTGCGACCACTACCAACTGGTTATTCGTTTATGTTATCGTTGTTGCCACCCCAACAGCCATC GCAAACATCCAGTGGAAGTATTATATGCTTTTTGCCATATTCAACTTCTGTTTCCTGCCAATCATCTGGCACTTC TATGTTGAGACCGCCAACCTGTCTCTTGAGCAGATTGACAGACTCTTTGAGATTAAACATGAGGCTGGGAAAGCA ATTAGCTGGTCGGAGGCAACCATGATAGCCCGTACAGAGGTCATTTCCGATTTGGCACACACCGAAAAGGAAAAT CTTGATGCTGAGCACTATGAGATTGCGGCTTGA |
| Gene | >Pro_DTO377G3_2|g6174.t1 ATGTTTTTCCAGAATGCACAAGGGAAATGGCTTCAATACAGAATCACTGCAGCCTGCGGTGCCGGTTTCCTCCTC TTTGGCTATGACCAGGGAGTCTTCGGCGGGCTTCTGGACAATGAGCCGTTCCTCGAGACCTTTGGAAATCCGGGC GTGACCATCCAAGGTCAAATTGTTGCGACTTATGACATTGGCTGCATAATAGGCACTCTGGTGACGATGTTCGCT GGAGACAAACTCGGACGAAGACGGACAATTCTGATCGGGTGCTGCATCCTGATCGTCGGCGCTATTCTCCAAACT GCATCCTATTCCCTTGCGCAGATGATTGTCGGTCGTGTCGTTGCGGGAGTTGGAAATGGAATGAACACAATTGCT ATTCCTATTTGGCAATCAGAAACTGCACGGGCAGAGCACCGTGGAAAACTCATCGTTGCACAGTTGGTAACGAAT ATTTTCGGCATCGTCATCACAAATGTAAGCTACTTCGTTCACAGTACAAGACCTTGGAGCAATGCTGATTTTTTT CCCTATCGCAGTGGATGAACTACGGATTCACTTTCATTCCTCACTCTGCCGTGAGCTGGCGATTCCCTCTGGGCT TCCAATGTTTCTTCGCGCTTGTCACTCTCGCTTTTGTTATTGTCGCCCCGGAGTCACCGCGTTGGCTGGTCATGA AACACCGTGGCAGCGAAGCCCGTGAAATCCTAGCACGGCTCCTTGCAAAGCCAATTGACGACCAGGAAGTGGTGG ATGAGATACAAAATTTGGAAATAGCCGTGAACCATGAAACCGAAGTCCAACAATCGAAGCCTTTGCAGGCAATCT TCAAGCGCAATAACAAGCAACAGACATTGCGCAGGATTCTTCTTGGAGCTGGTACTGCCTTTTTTCAACAAGTTG GTGGAACGAACGTCATTGCATACTATCTACCAGTGGTTCTGACCCGATCAGTTGGGTTGGACAACAGAATGGCCC TGATCTTGTCGGCCGTTGACTCTATGTCGCTAATGTTTTGGGGATGTATTGCAGCCCTGCTCATTGACCGCATTG GCCGAAAGAGATTGATGCTCTTCGGTGCCGCTGGTAGCAGCGTCTGCTTTGCGCTTGTTGCCGTTGGACTGCGGT ATGGTGGACCCGACAACAAGGGTATGTCTGTTCTAGCCGTGGTGTTCATCTTCGTCTACTACGTCTTCTACGGCA TGTCGCTCTTATCGATCCCGTATATCTATCCGGCAGAGATCAACTCCCAGCAAATGCGCAATATTGGCACTTCAT TTGCGACCACTACCAACTGGTTATTCGTTTATGTTATCGTTGTTGCCACCCCAACAGCCATCGCAAACATCCAGT GGAAGTATTATATGCTTTTTGCCATATTCAACTTCTGTTTCCTGCCAATCATCTGGCACTTCTATGTTGAGACCG CCAACCTGTCTCTTGAGCAGATTGACAGACTCTTTGAGATTAAACATGAGGCTGGGAAAGCAATTAGCTGGTCGG AGGCAACCATGATAGCCCGTACAGAGGTCATTTCCGATTTGGCACACACCGAAAAGGAAAATCTTGATGCTGAGC ACTATGAGATTGCGGCTTGA |