Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6153.t1
Gene name
Locationscaffold_16:98841..100246
Strand+
Gene length (bp)1405
Transcript length (bp)1236
Coding sequence length (bp)1236
Protein length (aa) 412

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10607 CTLH CTLH/CRA C-terminal to LisH motif domain 6.9E-32 166 318
PF13445 zf-RING_UBOX RING-type zinc-finger 1.1E-07 356 395

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6153.t1
MEVVQKEHSRLLKRTEGSQGIKNVQSAIDSLQSARDAIAADPSTASATLATLHNSVKSSFDSINASLKETHSGLN
KYTKSLDKLFKDRPLPSTDDDDLSSHETLINRAIAMHLLREGQFGVAATFLSEIAEEKRMYPVSQNERVPTNTTA
SLLDIDEVPSTEIRKQFASMYYILQQLQENRNLLPAIEWSRENREALEARGSNLEFELCRLQFVWLYHGGANSQG
TASGWLAALEYARQEFHLFVPRYLREVQQLVGAMAYSSNLSESPYAALFNNTSSAWDDVAHFFNREFCSLLGLSA
DSPLYIAATAGAIALPTLLKLQTIMKSKRTEWTSDNELPVEIPLPPQYLFHSIFVCPVSKEQATDENPPMMMPCG
HVIAQESLKRLGKGNRFKCPYCPSESHPKDAKKVFL*
Coding >Pro_DTO377G3_2|g6153.t1
ATGGAAGTAGTGCAGAAAGAACACAGCCGACTCCTCAAGAGGACCGAGGGCTCTCAGGGCATCAAGAATGTTCAG
TCTGCAATCGATTCACTTCAGTCTGCTCGCGATGCCATAGCTGCTGATCCATCCACTGCCTCTGCCACTCTAGCC
ACCCTTCACAACTCGGTTAAATCGTCCTTTGACTCTATCAATGCCAGCTTGAAAGAGACTCACAGTGGCCTCAAC
AAGTACACCAAATCGCTAGATAAGCTGTTTAAAGATCGACCACTGCCTAGCACCGACGACGATGACCTCTCTTCA
CACGAAACCCTGATCAACCGCGCTATCGCCATGCATCTCCTTCGCGAAGGTCAGTTCGGCGTGGCCGCCACCTTC
CTCTCCGAGATTGCCGAGGAGAAGAGAATGTATCCAGTCTCCCAGAACGAGCGTGTACCGACCAATACAACTGCG
AGCCTGCTCGATATTGACGAAGTCCCTTCGACCGAGATCCGGAAACAATTCGCCTCAATGTACTATATCCTACAA
CAACTACAAGAGAACAGGAACTTACTGCCTGCGATCGAATGGTCGAGAGAAAACCGCGAGGCGCTGGAAGCCCGA
GGCAGCAACCTGGAATTTGAACTCTGTCGACTGCAATTCGTATGGCTGTACCATGGCGGAGCGAACAGCCAGGGA
ACCGCAAGCGGATGGCTAGCAGCGCTCGAGTATGCACGGCAGGAGTTCCATCTCTTCGTGCCTCGGTATTTGAGA
GAAGTTCAGCAGCTAGTGGGCGCAATGGCGTACTCGTCCAACCTCAGCGAGTCGCCATATGCAGCTCTCTTCAAC
AATACTAGCTCGGCCTGGGATGACGTAGCTCACTTCTTCAATCGTGAGTTCTGTTCATTGCTGGGTCTTTCGGCG
GATTCACCGCTGTATATTGCTGCTACGGCGGGCGCGATCGCTCTGCCGACGCTATTGAAACTACAGACGATCATG
AAGTCGAAGCGGACGGAGTGGACTTCCGACAACGAGCTTCCGGTCGAAATACCTCTCCCTCCCCAATATCTCTTC
CATTCTATCTTTGTCTGTCCGGTTTCAAAGGAGCAAGCGACCGATGAGAATCCTCCTATGATGATGCCATGTGGA
CATGTCATTGCGCAGGAATCGTTGAAACGCCTGGGCAAGGGTAACCGGTTTAAATGCCCGTATTGTCCTAGCGAA
AGCCACCCCAAGGATGCCAAGAAAGTATTCCTGTAG
Transcript >Pro_DTO377G3_2|g6153.t1
ATGGAAGTAGTGCAGAAAGAACACAGCCGACTCCTCAAGAGGACCGAGGGCTCTCAGGGCATCAAGAATGTTCAG
TCTGCAATCGATTCACTTCAGTCTGCTCGCGATGCCATAGCTGCTGATCCATCCACTGCCTCTGCCACTCTAGCC
ACCCTTCACAACTCGGTTAAATCGTCCTTTGACTCTATCAATGCCAGCTTGAAAGAGACTCACAGTGGCCTCAAC
AAGTACACCAAATCGCTAGATAAGCTGTTTAAAGATCGACCACTGCCTAGCACCGACGACGATGACCTCTCTTCA
CACGAAACCCTGATCAACCGCGCTATCGCCATGCATCTCCTTCGCGAAGGTCAGTTCGGCGTGGCCGCCACCTTC
CTCTCCGAGATTGCCGAGGAGAAGAGAATGTATCCAGTCTCCCAGAACGAGCGTGTACCGACCAATACAACTGCG
AGCCTGCTCGATATTGACGAAGTCCCTTCGACCGAGATCCGGAAACAATTCGCCTCAATGTACTATATCCTACAA
CAACTACAAGAGAACAGGAACTTACTGCCTGCGATCGAATGGTCGAGAGAAAACCGCGAGGCGCTGGAAGCCCGA
GGCAGCAACCTGGAATTTGAACTCTGTCGACTGCAATTCGTATGGCTGTACCATGGCGGAGCGAACAGCCAGGGA
ACCGCAAGCGGATGGCTAGCAGCGCTCGAGTATGCACGGCAGGAGTTCCATCTCTTCGTGCCTCGGTATTTGAGA
GAAGTTCAGCAGCTAGTGGGCGCAATGGCGTACTCGTCCAACCTCAGCGAGTCGCCATATGCAGCTCTCTTCAAC
AATACTAGCTCGGCCTGGGATGACGTAGCTCACTTCTTCAATCGTGAGTTCTGTTCATTGCTGGGTCTTTCGGCG
GATTCACCGCTGTATATTGCTGCTACGGCGGGCGCGATCGCTCTGCCGACGCTATTGAAACTACAGACGATCATG
AAGTCGAAGCGGACGGAGTGGACTTCCGACAACGAGCTTCCGGTCGAAATACCTCTCCCTCCCCAATATCTCTTC
CATTCTATCTTTGTCTGTCCGGTTTCAAAGGAGCAAGCGACCGATGAGAATCCTCCTATGATGATGCCATGTGGA
CATGTCATTGCGCAGGAATCGTTGAAACGCCTGGGCAAGGGTAACCGGTTTAAATGCCCGTATTGTCCTAGCGAA
AGCCACCCCAAGGATGCCAAGAAAGTATTCCTGTAG
Gene >Pro_DTO377G3_2|g6153.t1
ATGGAAGTAGTGCAGAAAGAACACAGCCGACTCCTCAAGAGGACCGAGGGCTCTCAGGGCATCAAGAATGTTCAG
TCTGCAATCGATTCACTTCAGTCTGCTCGCGATGCCATAGCTGCTGGTCAGTAGTAAACGTGCCCCGCCAGGTTT
CTCAACTGACGACGTCGATTTCTCCCCAAATAGATCCATCCACTGCCTCTGCCACTCTAGCCACCCTTCACAACT
CGGTTAAATCGTCCTTTGACTCTATCAATGCCAGCTTGAAAGAGACTCACAGTGGCCTCAACAAGTACACCAAAT
CGCTAGATAAGGTATCCAGAATACTGATCGTCCATGCGTTGCTACCAATCTAACATCTGGAACAGCTGTTTAAAG
ATCGACCACTGCCTAGCACCGACGACGATGACCTCTCTTCACACGAAACCCTGATCAACCGCGCTATCGCCATGC
ATCTCCTTCGCGAAGGTCAGTTCGGCGTGGCCGCCACCTTCCTCTCCGAGATTGCCGAGGAGAAGAGAATGTATC
CAGTCTCCCAGAACGAGCGTGTACCGACCAATACAACTGCGAGCCTGCTCGATATTGACGAAGTCCCTTCGACCG
AGATCCGGAAACAATTCGCCTCAATGTACTATATCCTACAACAACTACAAGAGAACAGGAACTTACTGCCTGCGA
TCGAATGGTCGAGAGAAAACCGCGAGGCGCTGGAAGCCCGAGGCAGCAACCTGGAATTTGAACTCTGTCGACTGC
AATTCGTATGGCTGTACCATGGCGGAGCGAACAGCCAGGGAACCGCAAGCGGATGGCTAGCAGCGCTCGAGTATG
CACGGCAGGAGTTCCATCTCTTCGTGCCTCGGTATTTGAGAGAAGTTCAGCAGCTAGTGGGCGCAATGGCGTACT
CGTCCAACCTCAGCGAGTCGCCATATGCAGCTCTCTTCAACAATACTAGCTCGGCCTGGGATGACGTAGCTCACT
TCTTCAATCGTGAGTTCTGTTCATTGCTGGGTCTTTCGGCGGATTCACCGCTGTATATTGCTGCTACGGCGGGCG
CGATCGCTCTGCCGACGCTATTGAAACTACAGACGATCATGAAGTCGAAGCGGACGGAGTGGACTTCCGACAACG
AGCTTCCGGTAAGGAAACCGCTACTCTGTGTACGAATCAACACTAATATCTGTATTTTCAGGTCGAAATACCTCT
CCCTCCCCAATATCTCTTCCATTCTATCTTTGTCTGTCCGGTTTCAAAGGAGCAAGCGACCGATGAGAATCCTCC
TATGATGATGCCATGTGGACATGTCATTGCGCAGGAATCGTTGAAACGCCTGGGCAAGGGTAACCGGTTTAAATG
CCCGTATTGTCCTAGCGAAAGCCACCCCAAGGATGCCAAGAAAGTATTCCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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