© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6152.t1 |
| Gene name | |
| Location | scaffold_16:95157..96122 |
| Strand | - |
| Gene length (bp) | 965 |
| Transcript length (bp) | 708 |
| Coding sequence length (bp) | 708 |
| Protein length (aa) | 236 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 9.4E-33 | 5 | 212 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 58 | 75 | 17 |
| 3 | 87 | 109 | 22 |
| 4 | 124 | 146 | 22 |
| 5 | 153 | 175 | 22 |
| 6 | 190 | 209 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6152.t1 MFLPSWVFPAVAASTWLAMLLTMLGHWTMIGEPRYGLMKPGQNIPFISDIGAQELKPLFMIGSITTVLLLNLSFY QHVQNKSYISKACTHGSFLFTVVGSIGLIMLSVLDNIAHHFMHDVCVTIFIVGFLVSAALMCLDYIYLGIAHALR QPMLMTSFLIKSSFIVVELALIIVFRVTEHTHYNQNNMAATLEWVIAFVFTGYILSLIVDLMPSAHKNLHNPKGY QPVQMSMALP* |
| Coding | >Pro_DTO377G3_2|g6152.t1 ATGTTCCTCCCTTCCTGGGTCTTTCCGGCCGTAGCCGCGTCCACTTGGCTAGCAATGCTACTCACTATGTTAGGC CACTGGACTATGATCGGTGAACCGAGATATGGCTTGATGAAGCCTGGTCAGAATATACCATTCATTTCAGATATT GGAGCCCAGGAATTAAAACCCTTATTCATGATCGGATCGATCACAACAGTCCTACTTCTAAACCTCTCTTTCTAC CAACATGTTCAAAACAAGTCATACATCAGCAAAGCGTGCACGCACGGTTCATTCCTTTTCACAGTTGTCGGGAGT ATCGGATTGATTATGCTATCCGTCCTCGACAACATCGCCCACCATTTCATGCACGATGTCTGCGTGACAATCTTT ATCGTCGGGTTTCTCGTCAGCGCGGCCTTGATGTGCTTGGATTATATCTATCTGGGCATCGCACATGCCCTGCGG CAGCCCATGCTCATGACAAGTTTTCTTATCAAATCCTCGTTCATTGTCGTTGAACTTGCCCTCATTATTGTCTTC CGGGTCACGGAGCATACCCATTACAACCAGAATAACATGGCTGCTACTCTTGAATGGGTCATCGCCTTTGTCTTC ACCGGTTATATTCTCTCTTTGATTGTCGATCTGATGCCATCCGCTCACAAGAATCTCCACAATCCAAAGGGATAT CAACCAGTCCAGATGAGCATGGCCTTGCCTTAG |
| Transcript | >Pro_DTO377G3_2|g6152.t1 ATGTTCCTCCCTTCCTGGGTCTTTCCGGCCGTAGCCGCGTCCACTTGGCTAGCAATGCTACTCACTATGTTAGGC CACTGGACTATGATCGGTGAACCGAGATATGGCTTGATGAAGCCTGGTCAGAATATACCATTCATTTCAGATATT GGAGCCCAGGAATTAAAACCCTTATTCATGATCGGATCGATCACAACAGTCCTACTTCTAAACCTCTCTTTCTAC CAACATGTTCAAAACAAGTCATACATCAGCAAAGCGTGCACGCACGGTTCATTCCTTTTCACAGTTGTCGGGAGT ATCGGATTGATTATGCTATCCGTCCTCGACAACATCGCCCACCATTTCATGCACGATGTCTGCGTGACAATCTTT ATCGTCGGGTTTCTCGTCAGCGCGGCCTTGATGTGCTTGGATTATATCTATCTGGGCATCGCACATGCCCTGCGG CAGCCCATGCTCATGACAAGTTTTCTTATCAAATCCTCGTTCATTGTCGTTGAACTTGCCCTCATTATTGTCTTC CGGGTCACGGAGCATACCCATTACAACCAGAATAACATGGCTGCTACTCTTGAATGGGTCATCGCCTTTGTCTTC ACCGGTTATATTCTCTCTTTGATTGTCGATCTGATGCCATCCGCTCACAAGAATCTCCACAATCCAAAGGGATAT CAACCAGTCCAGATGAGCATGGCCTTGCCTTAG |
| Gene | >Pro_DTO377G3_2|g6152.t1 ATGTTCCTCCCTTCCTGGGTCTTTCCGGCCGTAGCCGCGTCCACTTGGCTAGGTGAGGTCTTGAATTTTCCACGA TCGCATTGAGCAATATGCTAACATTGGATTTAGCAATGCTACTCACTATGTTAGGCCACTGGACTATGATCGGTG AACCGAGATATGGCTTGATGAAGCCTGGTCAGAATATACCGTGAGCACTTGCCTTCTTTGGTCATCCTCAATCAT GCCAAGATTTAACCAACATCTTTGAACAGATTCATTTCAGATATTGGAGCCCAGGAATTAAAACCCTTATTCATG ATCGGATCGATCACAACAGTCCTACTTCTAAACCTCTCTTTCTACCAACATGTTCAAAACAAGTCATACATCAGC AAAGCGTGCACGCACGGTTCATTCCTTTTCACAGTTGTCGGGAGTATCGGATTGATTATGCTATCCGTCCTCGAC AACATCGCCCACCATTTCATGCACGATGTCTGCGTGACAATCTTTATGTATGTCCCTCGCCAAGACCGCTATACC CGATATATCCGGTATACCTCTTAAGTCACAATGTACTGACAGCTCCAGCGTCGGGTTTCTCGTCAGCGCGGCCTT GATGTGCTTGGATTATATCTATCTGGGCATCGCACATGCCCTGCGGCAGCCCATGCTCATGACAAGTTTTCTTAT CAAATCCTCGTTCATTGTCGTTGAACTTGCCCTCATTATTGTCTTCCGGGTCACGGAGCATACCCATTACAACCA GAATAACATGGCTGCTACTCTTGAATGGGGTGAGTATACATATGATTTTCGCCTGTCCACTGCCTGATATTATAC TAATCCGCTCCATAGTCATCGCCTTTGTCTTCACCGGTTATATTCTCTCTTTGATTGTCGATCTGATGCCATCCG CTCACAAGAATCTCCACAATCCAAAGGGATATCAACCAGTCCAGATGAGCATGGCCTTGCCTTAG |