Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6142.t1
Gene name
Locationscaffold_16:71879..73394
Strand-
Gene length (bp)1515
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12799 LRR_4 Leucine Rich repeats (2 copies) 2.4E-08 211 251
PF13855 LRR_8 Leucine rich repeat 1.3E-06 190 243
PF13516 LRR_6 Leucine Rich repeat 3.2E-01 122 134
PF13516 LRR_6 Leucine Rich repeat 2.1E+00 232 246

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6142.t1
MKNKEGWDGKMRMERKAVITNPEALEDSDYSDPDAPPVDEIEADEDLLAEEDVNAEDIDLVHCRISSISALKLER
FPKLQRLCMRQNQISRINFPPNVAASLTELDLYDNLISHINGLEEFHNLTSLDLSFNKIKHIKNVSHLKKLTEIF
FVQNKISRIEGLEELTEIKNLELGANKIREIENLETLTALEELWLGKNKIVEMKNLDSLSNLRIISIQSNRLTKI
TGLSALPKLEELYLSHNAVTDLSGLESNETLRVLDFSNNQVSHLEHLSSLKNLEELWGSNNQLASFQEVERELKD
KEKLQTVYFEGNPLQLNGPAVYRNKVRLALPNIQQIDATFVRV*
Coding >Pro_DTO377G3_2|g6142.t1
ATGAAGAACAAGGAGGGCTGGGACGGAAAAATGCGAATGGAGAGAAAGGCGGTTATTACAAACCCGGAGGCGCTG
GAGGACTCAGATTACTCGGATCCGGATGCACCCCCGGTCGATGAGATTGAGGCTGATGAAGATCTATTGGCAGAG
GAAGATGTCAATGCAGAGGATATCGACCTCGTGCATTGCCGGATATCGTCAATCTCTGCTCTTAAATTAGAACGC
TTCCCTAAACTTCAGAGACTATGCATGCGCCAGAATCAAATATCACGCATCAACTTTCCTCCTAATGTCGCCGCC
AGTCTGACCGAACTTGACCTCTACGATAACCTCATCTCCCACATCAACGGCCTGGAGGAGTTCCATAACTTGACA
AGCTTGGATCTGAGCTTCAACAAGATCAAGCATATCAAGAATGTCTCGCATCTGAAGAAGTTGACCGAGATTTTC
TTTGTGCAGAATAAAATCTCCCGTATCGAGGGCTTGGAGGAATTGACCGAAATCAAGAACTTGGAATTGGGCGCG
AATAAGATTCGGGAAATCGAAAACCTGGAAACACTGACCGCGTTGGAAGAACTCTGGCTTGGGAAAAACAAGATC
GTCGAAATGAAGAACCTGGACAGCCTCTCAAACCTTCGCATCATCTCCATCCAATCGAACCGCCTCACCAAAATC
ACGGGTCTTTCCGCGCTCCCAAAGCTTGAAGAGCTCTACCTCTCTCACAATGCAGTAACCGACCTTTCAGGGCTG
GAATCCAACGAGACACTCCGCGTACTCGACTTTTCCAACAACCAGGTCTCCCATCTTGAACATCTTTCATCACTA
AAGAACCTCGAGGAGCTGTGGGGGTCGAATAATCAGCTTGCTAGCTTCCAGGAAGTTGAGCGCGAGCTGAAGGAT
AAGGAGAAGCTGCAAACTGTTTACTTCGAGGGTAACCCGTTGCAATTGAATGGGCCGGCTGTTTATCGGAATAAG
GTGCGCTTGGCGTTGCCGAACATCCAGCAGATTGATGCTACGTTTGTCCGAGTTTAG
Transcript >Pro_DTO377G3_2|g6142.t1
ATGAAGAACAAGGAGGGCTGGGACGGAAAAATGCGAATGGAGAGAAAGGCGGTTATTACAAACCCGGAGGCGCTG
GAGGACTCAGATTACTCGGATCCGGATGCACCCCCGGTCGATGAGATTGAGGCTGATGAAGATCTATTGGCAGAG
GAAGATGTCAATGCAGAGGATATCGACCTCGTGCATTGCCGGATATCGTCAATCTCTGCTCTTAAATTAGAACGC
TTCCCTAAACTTCAGAGACTATGCATGCGCCAGAATCAAATATCACGCATCAACTTTCCTCCTAATGTCGCCGCC
AGTCTGACCGAACTTGACCTCTACGATAACCTCATCTCCCACATCAACGGCCTGGAGGAGTTCCATAACTTGACA
AGCTTGGATCTGAGCTTCAACAAGATCAAGCATATCAAGAATGTCTCGCATCTGAAGAAGTTGACCGAGATTTTC
TTTGTGCAGAATAAAATCTCCCGTATCGAGGGCTTGGAGGAATTGACCGAAATCAAGAACTTGGAATTGGGCGCG
AATAAGATTCGGGAAATCGAAAACCTGGAAACACTGACCGCGTTGGAAGAACTCTGGCTTGGGAAAAACAAGATC
GTCGAAATGAAGAACCTGGACAGCCTCTCAAACCTTCGCATCATCTCCATCCAATCGAACCGCCTCACCAAAATC
ACGGGTCTTTCCGCGCTCCCAAAGCTTGAAGAGCTCTACCTCTCTCACAATGCAGTAACCGACCTTTCAGGGCTG
GAATCCAACGAGACACTCCGCGTACTCGACTTTTCCAACAACCAGGTCTCCCATCTTGAACATCTTTCATCACTA
AAGAACCTCGAGGAGCTGTGGGGGTCGAATAATCAGCTTGCTAGCTTCCAGGAAGTTGAGCGCGAGCTGAAGGAT
AAGGAGAAGCTGCAAACTGTTTACTTCGAGGGTAACCCGTTGCAATTGAATGGGCCGGCTGTTTATCGGAATAAG
GTGCGCTTGGCGTTGCCGAACATCCAGCAGATTGATGCTACGTTTGTCCGAGTTTAG
Gene >Pro_DTO377G3_2|g6142.t1
ATGAAGAACAAGGAGGGCTGGGACGGAAAAATGCGAATGGAGAGAAAGGCGGTTATTACAAACCCGGAGGCGCTG
GAGGACTCAGATTACTCGGATCCGGATGCACCCCCGGTCGATGAGATTGAGGCTGATGAAGGTATGGTCGCTGGA
TGATTGATTGCTTAAGGCGCGGTCATTGGCGATTCAATAGACTAATGGACATTCAGATCTATTGGCAGAGGAAGA
TGTCAATGCAGAGGTAGGCTGATAGCCCTGGACTCTGCTGATCGACGCGCGCGCGACATTATTGCTAATCGTTCT
TCTGCTGCAGGATATCGACCTCGTGCATTGCCGGATATCGTCAATCTCTGCTCTTAAATTAGAACGCTTCCCTAA
ACTTCAGGTACATACTCCCAACGGCCCTGGAATCCGCATGTGCCTGGTAGCGGAGAGGGGCATGGTACCACTTTT
TCCTCGAAGGACAAAAGTGCAACGGCGAGGCATTTCTTTGGTTTATCCAGATGGCTAATGCGCTAGGATATACAG
AGACTATGCATGCGCCAGAATCAAATATCACGCATCAACTTTCCTCCTAATGTCGCCGCCAGTCTGACCGAACTT
GACCTCTACGATAACCTCATCTCCCACATCAACGGCCTGGAGGAGTTCCATAACTTGACAAGCTTGGATCTGAGC
TTCAACAAGATCAAGCATATCAAGAATGTCTCGCATCTGAAGAAGTTGACCGAGATTTTCTTTGTGCAGAATAAA
ATCTCCCGTATCGAGGGCTTGGAGGAATTGACCGAAATCAAGAACTTGGAATTGGGCGCGAATAAGATTCGGGTT
CGTATTATATGATACTGGGTACGAGGTGAACAATTGAAATGCTGACACGAGTCCTTTCAGGAAATCGAAAACCTG
GAAACACTGACCGCGTTGGAAGAACTCTGGCTTGGGAAAAACAAGATCGTCGAAATGAAGGTCCGCAGTTGTCAC
CTAACATACCTTAACAAACTAAGAAGCTGACAGCCTTGCAGAACCTGGACAGCCTCTCAAACCTTCGCATCATCT
CCATCCAATCGAACCGCCTCACCAAAATCACGGGTCTTTCCGCGCTCCCAAAGCTTGAAGAGCTCTACCTCTCTC
ACAATGCAGTAACCGACCTTTCAGGGCTGGAATCCAACGAGACACTCCGCGTACTCGACTTTTCCAACAACCAGG
TCTCCCATCTTGAACATCTTTCATCACTAAAGAACCTCGAGGAGCTGTGGGGGTCGAATAATCAGCTTGCTAGCT
TCCAGGAAGTTGAGCGCGAGCTGAAGGATAAGGAGAAGCTGCAAACTGTTTACTTCGAGGGTAACCCGTTGCAAT
TGAATGGGCCGGCTGTTTATCGGAATAAGGTGCGCTTGGCGTTGCCGAACATCCAGCAGATTGATGCTAGTAAGC
GTTTCCTCTCCGACTCTCTTGCAGTATACACATGATTTTGAACATGGCGCTAATATGATACTTCACCTTATAGCG
TTTGTCCGAGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail