Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6133.t1
Gene name
Locationscaffold_16:54683..57595
Strand+
Gene length (bp)2912
Transcript length (bp)2508
Coding sequence length (bp)2508
Protein length (aa) 836

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6.2E-10 6 66
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5.7E-18 314 384
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6.7E-10 497 558
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6.4E-11 610 684
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3.5E-15 715 783
PF13893 RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6.9E-02 726 803

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6133.t1
MESTRVFVGGLPPTCSNDQLKKHFATRFQVTDAHVLPKRRMGFVGFKSHEAALQAVKHFNKTYMKMSKIAVDIAR
PIDSNDAEDAHPTRRRDATNDNDASLDNNLKRKRDGENKSQDPKLQEYLSLMGSSSKTRTWANDDDMIKPSVDTV
PVINQPAQEEEQIQDLPSHPKKAKTEKPSTVATPEQPEPMVIDKIEEQEAQETPEQDNSAEPEEETRPVSDADWL
RSKTSRLLGLLDEEEQDEFDQHKAAAPTTAPIKAHSPPSSSGDESPQRDEESRTAAIEKIAPNTTDVDSITEATP
EDPNIDLIRKSARLFLRNLAYDTTESDLQPIFERFGKIEEIHVAFDTRSTTSKGFAYVQYSHADAAIEAYQTLDG
KHFQGRLLHILPASAKKTYKIDEYELSKLPLKKQREIKRKQNASGSSFSWNSLYMNADAVMSSVASRLGVSKSEL
LDPTSSEAAVKQAHAETHVIQETKAYFASNGVNIDAFKQRERGNTAILVKNFSYGVTSAELRSLFDPYGKIIRLL
MPPSGTIAIVQFAQPDEAQKAFKGMAYRKIGDSILFLEKAPKNLFDGSAAPPTLAPETRGKDQGFSTADTFAADE
PDDSVATTTLFVKNLNFSTTNEKFLEVFRSLDGFITGRIKTKPDPKRPGQTLSMGFGFADFKTKGQAQAALSAMN
GYKLDQHELLIRASHKGKDAAEERRREDTAKKVAARRTKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDH
TARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFVNEEAVDPEEELARLEKKVGEQMDRVKLQQLTTGAGRK
KFTVGGQEEE*
Coding >Pro_DTO377G3_2|g6133.t1
ATGGAGAGCACTAGAGTGTTCGTGGGTGGTCTCCCACCGACATGCTCTAATGATCAGCTAAAGAAACATTTTGCA
ACTCGCTTTCAAGTCACCGATGCTCATGTCCTACCTAAACGTAGGATGGGGTTCGTCGGCTTCAAAAGCCATGAA
GCAGCCCTGCAAGCTGTGAAGCACTTCAACAAGACATACATGAAGATGTCGAAGATCGCTGTAGACATCGCTCGT
CCGATTGACTCAAATGACGCTGAGGATGCCCACCCCACACGACGACGTGATGCCACGAATGATAATGATGCATCG
TTGGATAACAACCTCAAGCGCAAGAGGGACGGCGAGAACAAATCACAGGACCCTAAGCTACAAGAGTACCTCTCT
CTGATGGGATCATCATCGAAGACTCGGACATGGGCCAACGATGATGATATGATCAAGCCGTCAGTGGACACGGTT
CCCGTTATTAACCAACCCGCGCAGGAAGAAGAGCAGATTCAGGACCTGCCTTCACACCCAAAAAAGGCAAAGACA
GAAAAACCTTCCACGGTAGCAACGCCTGAGCAGCCTGAGCCCATGGTAATTGACAAGATTGAAGAACAGGAGGCT
CAAGAAACACCAGAACAGGACAACTCTGCGGAGCCTGAAGAGGAGACTAGACCTGTATCTGATGCAGATTGGCTA
CGGTCAAAGACGAGTCGTTTGTTGGGCCTTCTCGATGAGGAAGAACAAGATGAGTTTGATCAACACAAGGCCGCC
GCACCGACTACTGCGCCGATCAAAGCTCATTCACCACCTTCCTCGTCTGGCGATGAGTCGCCTCAGCGTGACGAA
GAATCGCGCACTGCGGCCATTGAGAAAATTGCGCCCAACACGACTGACGTTGACAGCATCACCGAGGCAACGCCG
GAAGATCCGAATATCGATCTTATTCGGAAATCGGCCCGTTTATTCCTCCGGAATCTTGCCTATGACACCACGGAA
TCTGATCTACAACCGATTTTTGAACGCTTTGGAAAGATTGAGGAGATTCACGTTGCTTTTGACACACGCTCCACA
ACTAGTAAAGGCTTTGCTTATGTGCAATACTCGCATGCTGATGCGGCCATTGAGGCCTACCAGACCCTTGATGGC
AAGCATTTCCAGGGTCGTCTGCTCCACATCTTGCCTGCTTCTGCGAAAAAGACCTACAAGATTGACGAATACGAA
TTGTCAAAGCTTCCTCTGAAGAAGCAGAGGGAGATCAAGCGAAAACAAAACGCCTCTGGATCGTCATTTAGTTGG
AACTCCCTATACATGAATGCCGATGCTGTGATGTCATCAGTGGCCTCAAGGCTCGGAGTCTCCAAATCTGAACTG
CTTGATCCCACTTCTTCAGAAGCCGCCGTCAAGCAAGCACATGCTGAAACGCATGTGATTCAAGAAACTAAAGCC
TACTTTGCTTCGAATGGAGTAAATATTGATGCTTTCAAGCAGCGCGAACGTGGGAACACGGCTATTTTGGTCAAG
AACTTCTCATATGGTGTCACGTCGGCAGAGCTCAGGAGTCTGTTCGATCCATATGGCAAGATTATCCGACTCTTG
ATGCCGCCAAGTGGCACTATTGCTATCGTGCAATTTGCGCAGCCTGACGAGGCCCAGAAGGCTTTCAAGGGCATG
GCATACCGCAAGATAGGTGATTCTATCTTGTTCCTGGAGAAAGCACCGAAGAATTTGTTTGATGGTTCAGCAGCT
CCACCCACACTTGCTCCAGAGACTCGGGGCAAGGATCAAGGTTTCTCAACTGCAGACACATTTGCCGCAGATGAA
CCTGATGACAGCGTAGCAACTACGACACTCTTCGTAAAAAACCTGAATTTCTCGACCACAAATGAGAAGTTCCTG
GAAGTGTTTCGATCTCTGGATGGCTTTATCACTGGTCGCATCAAGACCAAACCTGATCCCAAGCGACCAGGGCAG
ACCCTCAGCATGGGATTCGGCTTTGCGGATTTCAAAACCAAGGGTCAAGCCCAGGCTGCTCTTTCAGCTATGAAC
GGCTACAAGTTGGATCAGCACGAGCTTCTCATCCGCGCATCCCATAAAGGCAAGGATGCCGCCGAGGAGCGGAGG
CGCGAAGATACCGCGAAGAAGGTTGCAGCGCGGAGAACCAAAATCATCATCAAGAACTTGCCGTTCCAGGCCACG
AAGAAGGACATCAGATCTCTCTTCGGGGCATATGGACAACTTCGGTCTGTGCGTGTTCCCCAGAAGTTCGATCAT
ACTGCTCGTGGTTTCGGTTTTGCAGACTTTGTAAGCGCTCGCGAAGCAGAAAATGCCATGGACGCGTTGAAAAAC
ACGCATCTCCTGGGGAGACGATTGGTTTTGGAGTTCGTGAACGAGGAGGCCGTCGATCCCGAGGAGGAGCTCGCG
CGCCTAGAGAAGAAGGTAGGAGAGCAGATGGACAGGGTCAAACTTCAACAGCTTACTACTGGCGCCGGGCGCAAG
AAATTTACTGTAGGAGGGCAGGAGGAAGAGTGA
Transcript >Pro_DTO377G3_2|g6133.t1
ATGGAGAGCACTAGAGTGTTCGTGGGTGGTCTCCCACCGACATGCTCTAATGATCAGCTAAAGAAACATTTTGCA
ACTCGCTTTCAAGTCACCGATGCTCATGTCCTACCTAAACGTAGGATGGGGTTCGTCGGCTTCAAAAGCCATGAA
GCAGCCCTGCAAGCTGTGAAGCACTTCAACAAGACATACATGAAGATGTCGAAGATCGCTGTAGACATCGCTCGT
CCGATTGACTCAAATGACGCTGAGGATGCCCACCCCACACGACGACGTGATGCCACGAATGATAATGATGCATCG
TTGGATAACAACCTCAAGCGCAAGAGGGACGGCGAGAACAAATCACAGGACCCTAAGCTACAAGAGTACCTCTCT
CTGATGGGATCATCATCGAAGACTCGGACATGGGCCAACGATGATGATATGATCAAGCCGTCAGTGGACACGGTT
CCCGTTATTAACCAACCCGCGCAGGAAGAAGAGCAGATTCAGGACCTGCCTTCACACCCAAAAAAGGCAAAGACA
GAAAAACCTTCCACGGTAGCAACGCCTGAGCAGCCTGAGCCCATGGTAATTGACAAGATTGAAGAACAGGAGGCT
CAAGAAACACCAGAACAGGACAACTCTGCGGAGCCTGAAGAGGAGACTAGACCTGTATCTGATGCAGATTGGCTA
CGGTCAAAGACGAGTCGTTTGTTGGGCCTTCTCGATGAGGAAGAACAAGATGAGTTTGATCAACACAAGGCCGCC
GCACCGACTACTGCGCCGATCAAAGCTCATTCACCACCTTCCTCGTCTGGCGATGAGTCGCCTCAGCGTGACGAA
GAATCGCGCACTGCGGCCATTGAGAAAATTGCGCCCAACACGACTGACGTTGACAGCATCACCGAGGCAACGCCG
GAAGATCCGAATATCGATCTTATTCGGAAATCGGCCCGTTTATTCCTCCGGAATCTTGCCTATGACACCACGGAA
TCTGATCTACAACCGATTTTTGAACGCTTTGGAAAGATTGAGGAGATTCACGTTGCTTTTGACACACGCTCCACA
ACTAGTAAAGGCTTTGCTTATGTGCAATACTCGCATGCTGATGCGGCCATTGAGGCCTACCAGACCCTTGATGGC
AAGCATTTCCAGGGTCGTCTGCTCCACATCTTGCCTGCTTCTGCGAAAAAGACCTACAAGATTGACGAATACGAA
TTGTCAAAGCTTCCTCTGAAGAAGCAGAGGGAGATCAAGCGAAAACAAAACGCCTCTGGATCGTCATTTAGTTGG
AACTCCCTATACATGAATGCCGATGCTGTGATGTCATCAGTGGCCTCAAGGCTCGGAGTCTCCAAATCTGAACTG
CTTGATCCCACTTCTTCAGAAGCCGCCGTCAAGCAAGCACATGCTGAAACGCATGTGATTCAAGAAACTAAAGCC
TACTTTGCTTCGAATGGAGTAAATATTGATGCTTTCAAGCAGCGCGAACGTGGGAACACGGCTATTTTGGTCAAG
AACTTCTCATATGGTGTCACGTCGGCAGAGCTCAGGAGTCTGTTCGATCCATATGGCAAGATTATCCGACTCTTG
ATGCCGCCAAGTGGCACTATTGCTATCGTGCAATTTGCGCAGCCTGACGAGGCCCAGAAGGCTTTCAAGGGCATG
GCATACCGCAAGATAGGTGATTCTATCTTGTTCCTGGAGAAAGCACCGAAGAATTTGTTTGATGGTTCAGCAGCT
CCACCCACACTTGCTCCAGAGACTCGGGGCAAGGATCAAGGTTTCTCAACTGCAGACACATTTGCCGCAGATGAA
CCTGATGACAGCGTAGCAACTACGACACTCTTCGTAAAAAACCTGAATTTCTCGACCACAAATGAGAAGTTCCTG
GAAGTGTTTCGATCTCTGGATGGCTTTATCACTGGTCGCATCAAGACCAAACCTGATCCCAAGCGACCAGGGCAG
ACCCTCAGCATGGGATTCGGCTTTGCGGATTTCAAAACCAAGGGTCAAGCCCAGGCTGCTCTTTCAGCTATGAAC
GGCTACAAGTTGGATCAGCACGAGCTTCTCATCCGCGCATCCCATAAAGGCAAGGATGCCGCCGAGGAGCGGAGG
CGCGAAGATACCGCGAAGAAGGTTGCAGCGCGGAGAACCAAAATCATCATCAAGAACTTGCCGTTCCAGGCCACG
AAGAAGGACATCAGATCTCTCTTCGGGGCATATGGACAACTTCGGTCTGTGCGTGTTCCCCAGAAGTTCGATCAT
ACTGCTCGTGGTTTCGGTTTTGCAGACTTTGTAAGCGCTCGCGAAGCAGAAAATGCCATGGACGCGTTGAAAAAC
ACGCATCTCCTGGGGAGACGATTGGTTTTGGAGTTCGTGAACGAGGAGGCCGTCGATCCCGAGGAGGAGCTCGCG
CGCCTAGAGAAGAAGGTAGGAGAGCAGATGGACAGGGTCAAACTTCAACAGCTTACTACTGGCGCCGGGCGCAAG
AAATTTACTGTAGGAGGGCAGGAGGAAGAGTGA
Gene >Pro_DTO377G3_2|g6133.t1
ATGGAGAGCACTAGAGTGTTCGTGGGTGGTCTCCCACCGACATGCTCTAATGATCAGCTAAAGAAACATTTTGCA
ACTCGCTTTCAAGTCACCGATGCTCATGTCCTACCTAAACGTAGGATGGGGTTCGTCGGCTTCAAAAGCCATGAA
GCAGCCCTGCAAGCTGTGAAGCACTTCAACAAGACATACATGAAGATGTCGAAGATCGCTGTAGACATCGCTCGT
CCGGTATGTCGATTCTCAGCTCTTTTTGCTTCAGCCACCCTCCTTTCGCCTGTGCACGCTGACCAATTAAGGTGG
TCTTGAGACTGACCCGTATTATTGCAGATTGACTCAAATGACGCTGAGGATGCCCACCCCACACGACGACGTGAT
GCCACGAATGATAATGATGCATCGTTGGATAACAACCTCAAGCGCAAGAGGGACGGCGAGAACAAATCACAGGAC
CCTAAGCTACAAGAGTACCTCTCTCTGATGGGATCATCATCGAAGACTCGGACATGGGCCAACGATGATGATATG
ATCAAGCCGTCAGTGGACACGGTTCCCGTTATTAACCAACCCGCGCAGGAAGAAGAGCAGATTCAGGACCTGCCT
TCACACCCAAAAAAGGCAAAGACAGAAAAACCTTCCACGGTAGCAACGCCTGAGCAGCCTGAGCCCATGGTAATT
GACAAGATTGAAGAACAGGAGGCTCAAGAAACACCAGAACAGGACAACTCTGCGGAGCCTGAAGAGGAGACTAGA
CCTGTATCTGATGCAGATTGGCTACGGTCAAAGACGAGTCGTTTGTTGGGCCTTCTCGATGAGGAAGAACAAGAT
GAGTTTGATCAACACAAGGCCGCCGCACCGACTACTGCGCCGATCAAAGCTCATTCACCACCTTCCTCGTCTGGC
GATGAGTCGCCTCAGCGTGACGAAGAATCGCGCACTGCGGCCATTGAGAAAATTGCGCCCAACACGACTGACGTT
GACAGCATCACCGAGGCAACGCCGGAAGATCCGAATATCGATCTTATTCGGAAATCGGCCCGTTTATTCCTCCGG
AATCTTGCCTATGACACCACGGAATCTGATCTACAACCGATTTTTGAACGCTTTGGAAAGATTGAGGAGGTTAGT
ACTTACCTTTTTTTGCTTTCTCAACCCTGCCCCGCCTTTCCCCCAGTGCGGCAGACTAGCCTGTTTGTTACGAGT
GCTCGTATGATGATTTTCCCGATAGGGACATCCGATGCAAATTGCAAATGATGTTACCAGGACAAGATATTTTAG
TAGATGCTTCTTGACTATCTGAAAGAGCCAACTCAACCCACTTTTCCACATTTACACATTATATTCAATGACCTT
GAGTACTAATTGAATATAGATTCACGTTGCTTTTGACACACGCTCCACAACTAGTAAAGGCTTTGCTTATGTGCA
ATACTCGCATGCTGATGCGGCCATTGAGGCCTACCAGACCCTTGATGGCAAGCATTTCCAGGGTCGTCTGCTCCA
CATCTTGCCTGCTTCTGCGAAAAAGACCTACAAGATTGACGAATACGAATTGTCAAAGCTTCCTCTGAAGAAGCA
GAGGGAGATCAAGCGAAAACAAAACGCCTCTGGATCGTCATTTAGTTGGAACTCCCTATACATGAATGTGAGTTT
ACCTCTTACCACCACCAATCAAAAGGTTGAGACTAATTTCGCTACAGGCCGATGCTGTGATGTCATCAGTGGCCT
CAAGGCTCGGAGTCTCCAAATCTGAACTGCTTGATCCCACTTCTTCAGAAGCCGCCGTCAAGCAAGCACATGCTG
AAACGCATGTGATTCAAGAAACTAAAGCCTACTTTGCTTCGAATGGAGTAAATATTGATGCTTTCAAGCAGCGCG
AACGTGGGAACACGGCTATTTTGGTCAAGAACTTCTCATATGGTGTCACGTCGGCAGAGCTCAGGAGTCTGTTCG
ATCCATATGGCAAGATTATCCGACTCTTGATGCCGCCAAGTGGCACTATTGCTATCGTGCAATTTGCGCAGCCTG
ACGAGGCCCAGAAGGCTTTCAAGGGCATGGCATACCGCAAGATAGGTGATTCTATCTTGTTCCTGGAGAAAGCAC
CGAAGAATTTGTTTGATGGTTCAGCAGCTCCACCCACACTTGCTCCAGAGACTCGGGGCAAGGATCAAGGTTTCT
CAACTGCAGACACATTTGCCGCAGATGAACCTGATGACAGCGTAGCAACTACGACACTCTTCGTAAAAAACCTGA
ATTTCTCGACCACAAATGAGAAGTTCCTGGAAGTGTTTCGATCTCTGGATGGCTTTATCACTGGTCGCATCAAGA
CCAAACCTGATCCCAAGCGACCAGGGCAGACCCTCAGCATGGGATTCGGCTTTGCGGATTTCAAAACCAAGGGTC
AAGCCCAGGCTGCTCTTTCAGCTATGAACGGCTACAAGTTGGATCAGCACGAGCTTCTCATCCGCGCATCCCATA
AAGGCAAGGATGCCGCCGAGGAGCGGAGGCGCGAAGATACCGCGAAGAAGGTTGCAGCGCGGAGAACCAAAATCA
TCATCAAGAACTTGCCGTTCCAGGCCACGAAGAAGGACATCAGATCTCTCTTCGGGGCATATGGACAACTTCGGT
CTGTGCGTGTTCCCCAGAAGTTCGATCATACTGCTCGTGGTTTCGGTTTTGCAGACTTTGTAAGCGCTCGCGAAG
CAGAAAATGCCATGGACGCGTTGAAAAACACGCATCTCCTGGGGAGACGATTGGTTTTGGAGTTCGTGAACGAGG
AGGCCGTCGATCCCGAGGAGGAGCTCGCGCGCCTAGAGAAGAAGGTAGGAGAGCAGATGGACAGGGTCAAACTTC
AACAGCTTACTACTGGCGCCGGGCGCAAGAAATTTACTGTAGGAGGGCAGGAGGAAGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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