Protein ID | Pro_DTO377G3_2|g6068.t1 |
Gene name | |
Location | scaffold_15:526941..530013 |
Strand | - |
Gene length (bp) | 3072 |
Transcript length (bp) | 2778 |
Coding sequence length (bp) | 2778 |
Protein length (aa) | 926 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03169 | OPT | OPT oligopeptide transporter protein | 5.1E-200 | 169 | 886 |
GO Term | Description | Terminal node |
---|---|---|
GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
GO:1904680 | peptide transmembrane transporter activity | No |
GO:0042887 | amide transmembrane transporter activity | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0005215 | transporter activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 15 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 174 | 191 | 17 |
2 | 198 | 220 | 22 |
3 | 303 | 320 | 17 |
4 | 327 | 349 | 22 |
5 | 369 | 391 | 22 |
6 | 403 | 425 | 22 |
7 | 438 | 460 | 22 |
8 | 607 | 626 | 19 |
9 | 636 | 658 | 22 |
10 | 671 | 693 | 22 |
11 | 717 | 739 | 22 |
12 | 785 | 807 | 22 |
13 | 830 | 852 | 22 |
14 | 873 | 892 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g6068.t1 MSGAPLLRSSPVLGAPSYGALRDPDGSEEDTPVSRGPKVRGGLHRASFGDGIGSSSNVPGSTPRRSHSFVRQRNS LYAERNRRPSSAASDVGMGPDSKYSFATGLAVPGNPVMQETPASSPYMTSDDENVLDIDDDDSKSSDEDPPDNSP YAQVRASVPATDDFSLSINTPRMWILSLLFSLTGSAANLFFSLRYPSVAITPIIALVLVHPLGKFWDLIFRQTGD PLEFFENGTLHHRESLSGDIEAPPVPLASRVRLWFAQGRWNEKEHACVYISSNVSFGFAFATDVIVEQHKFYNQD VPIIYQLLLIISTQVLGYAFAGLTRRFLVRPSAMIWPGTLMSTAMFSTMHKSVNKKANGWSISRYKFFVVVWAGA FLWYFVPGLLMPALSYFNVITWLAPKNVVISNLFGVASGLGMFPLTFDWAQIAYIGSPLLTPWWAAANIVTGLVV VIWIAAPILYYKNVLFSAYMPIVSTAVFDNSGRPYNVSRILTTDFLFDEKAYQDYSPVYLPITYVLSYGVQFAAL TSLVSHTICWYGKDIWQQTRKAFEEKRQVPDMETYQPLRGSNDAPRQSYEIPRTSSREASQDIPLGGEDVHCRLM RRYKDAPLMWYLVVFVSMLVIAIFTVEYYPTHLPWYGLLLALGITSVFFIPVGIIMAVTNQHSSLYLICQLLCGI VFPGRPVANMIFVTYSYISSAQGIKFSSDLKLGHYMKIPPRILFGVQMMATLVSSLTQIGVLNWMFTFVPGLCTP EAINGFNCPIARVHFNGSILWGVVGPQRFFGPGGLYRPLVWAFLIGAIAPLGAWLLGRHSKKSFWRMVNFPILFG SLSWIPPATGLNFSIWALVCFVFNYVIRRRRTAWWEKYAMTLSAALDSGLAFSVVVVFFAFIYPGWVDGFKWWGT EIYKQGCDWIACPYKPLEPGQRFGQ* |
Coding | >Pro_DTO377G3_2|g6068.t1 ATGTCGGGCGCCCCTCTTCTTCGTTCATCGCCCGTCCTGGGCGCTCCCTCTTACGGAGCATTGCGAGACCCGGAC GGCTCAGAAGAGGACACACCCGTTTCGCGTGGGCCGAAAGTTCGTGGGGGGTTACACCGCGCGAGCTTCGGAGAT GGCATCGGAAGTTCTTCCAACGTACCAGGGTCTACTCCGAGACGATCACATTCCTTTGTCAGACAACGAAACAGC TTATATGCAGAGAGAAATCGTCGGCCTTCCTCCGCCGCGTCCGATGTGGGAATGGGTCCTGATTCGAAATACTCG TTCGCTACTGGATTGGCTGTACCGGGTAACCCGGTGATGCAGGAGACTCCGGCGTCTTCACCATATATGACAAGT GATGATGAAAATGTCCTCGACATTGATGATGATGATTCAAAATCCTCGGATGAGGATCCTCCAGACAATTCGCCG TATGCCCAAGTTCGGGCTTCCGTTCCGGCGACAGATGATTTCTCTCTTTCTATTAACACACCTCGAATGTGGATT CTTTCGTTGTTATTCTCTTTGACGGGGTCTGCCGCCAATCTTTTCTTTTCCTTGCGCTATCCCAGTGTTGCCATT ACACCAATCATTGCTCTTGTTCTAGTCCATCCACTGGGCAAATTTTGGGATTTAATTTTCAGACAAACAGGTGAT CCGCTCGAGTTTTTTGAAAACGGAACCCTTCACCACCGGGAATCACTCTCCGGTGATATCGAGGCCCCTCCTGTT CCATTGGCGTCTCGAGTCAGACTTTGGTTTGCCCAGGGCCGTTGGAACGAAAAGGAGCATGCTTGCGTTTACATC AGCAGCAATGTTTCCTTTGGGTTTGCTTTCGCGACTGATGTTATTGTTGAGCAACATAAATTTTACAACCAGGAT GTTCCAATTATATATCAGCTGCTGCTCATAATTTCCACTCAAGTTTTGGGATATGCATTCGCGGGTCTAACTCGA CGATTCCTCGTGCGGCCATCGGCTATGATCTGGCCGGGGACCCTGATGTCCACTGCAATGTTCTCTACAATGCAC AAGTCTGTCAACAAAAAGGCAAATGGGTGGAGTATCTCCCGATATAAGTTCTTCGTCGTTGTGTGGGCAGGGGCC TTTCTCTGGTATTTTGTCCCGGGACTGTTGATGCCTGCTCTGAGTTATTTTAATGTGATCACTTGGTTGGCACCC AAAAATGTGGTGATTTCGAATTTGTTTGGTGTTGCCTCTGGTCTCGGAATGTTTCCCTTGACCTTCGATTGGGCT CAGATTGCCTATATTGGCTCACCGTTACTCACGCCCTGGTGGGCTGCAGCTAATATTGTCACGGGACTGGTGGTT GTCATCTGGATAGCCGCCCCAATACTTTATTATAAAAATGTGCTTTTCTCTGCATATATGCCCATAGTTTCAACA GCTGTGTTCGACAATTCCGGGCGACCATACAACGTGAGCCGAATATTGACCACGGATTTTTTGTTTGATGAAAAG GCCTATCAAGATTACTCCCCAGTTTATCTCCCAATCACCTACGTGCTGTCTTACGGTGTTCAGTTTGCTGCTTTG ACATCCCTTGTCTCTCACACCATTTGCTGGTATGGCAAGGACATTTGGCAACAGACTAGGAAGGCCTTTGAGGAA AAACGGCAAGTGCCAGACATGGAGACGTACCAGCCCCTTCGTGGAAGCAATGATGCTCCCCGACAGAGTTATGAA ATCCCAAGGACTAGCTCACGTGAAGCGAGCCAGGACATTCCATTGGGAGGGGAAGATGTTCATTGTCGCTTGATG AGGCGCTATAAGGACGCTCCCCTCATGTGGTATCTTGTTGTGTTCGTTTCTATGCTTGTCATTGCCATCTTCACG GTGGAATATTACCCAACACATTTACCTTGGTATGGCCTACTCCTGGCTCTTGGTATTACTTCTGTGTTTTTCATC CCAGTGGGTATCATCATGGCTGTCACCAATCAACATAGCAGCCTCTATCTGATCTGCCAACTCCTTTGCGGTATT GTATTCCCGGGAAGGCCTGTAGCGAACATGATTTTCGTGACCTACTCATATATCAGCTCTGCACAAGGGATCAAA TTTTCCTCGGACCTCAAGCTCGGCCATTACATGAAGATCCCACCACGAATTCTGTTTGGCGTGCAGATGATGGCG ACTTTAGTCTCGAGTCTGACCCAAATTGGTGTGCTGAACTGGATGTTCACTTTTGTCCCGGGGCTTTGCACCCCA GAGGCTATCAATGGTTTCAACTGCCCCATTGCTCGAGTCCATTTCAACGGCAGCATTCTCTGGGGAGTCGTTGGC CCGCAGCGCTTCTTTGGCCCAGGAGGGCTATACCGTCCGCTTGTCTGGGCCTTTTTGATAGGAGCCATCGCCCCT CTCGGAGCGTGGCTTCTGGGAAGACACAGCAAGAAGAGTTTCTGGCGTATGGTCAACTTCCCTATCTTGTTTGGC AGTCTGAGCTGGATCCCACCTGCAACCGGGCTCAACTTTTCCATCTGGGCCCTTGTATGTTTTGTGTTCAATTAT GTGATCCGGCGAAGGAGGACCGCATGGTGGGAAAAATATGCAATGACATTGTCGGCCGCATTGGATTCCGGGTTG GCATTCTCAGTGGTCGTTGTCTTCTTCGCCTTCATTTACCCGGGATGGGTCGATGGTTTCAAATGGTGGGGGACG GAGATTTATAAACAGGGCTGTGATTGGATTGCTTGTCCATACAAACCACTGGAACCGGGTCAACGATTCGGTCAG TAG |
Transcript | >Pro_DTO377G3_2|g6068.t1 ATGTCGGGCGCCCCTCTTCTTCGTTCATCGCCCGTCCTGGGCGCTCCCTCTTACGGAGCATTGCGAGACCCGGAC GGCTCAGAAGAGGACACACCCGTTTCGCGTGGGCCGAAAGTTCGTGGGGGGTTACACCGCGCGAGCTTCGGAGAT GGCATCGGAAGTTCTTCCAACGTACCAGGGTCTACTCCGAGACGATCACATTCCTTTGTCAGACAACGAAACAGC TTATATGCAGAGAGAAATCGTCGGCCTTCCTCCGCCGCGTCCGATGTGGGAATGGGTCCTGATTCGAAATACTCG TTCGCTACTGGATTGGCTGTACCGGGTAACCCGGTGATGCAGGAGACTCCGGCGTCTTCACCATATATGACAAGT GATGATGAAAATGTCCTCGACATTGATGATGATGATTCAAAATCCTCGGATGAGGATCCTCCAGACAATTCGCCG TATGCCCAAGTTCGGGCTTCCGTTCCGGCGACAGATGATTTCTCTCTTTCTATTAACACACCTCGAATGTGGATT CTTTCGTTGTTATTCTCTTTGACGGGGTCTGCCGCCAATCTTTTCTTTTCCTTGCGCTATCCCAGTGTTGCCATT ACACCAATCATTGCTCTTGTTCTAGTCCATCCACTGGGCAAATTTTGGGATTTAATTTTCAGACAAACAGGTGAT CCGCTCGAGTTTTTTGAAAACGGAACCCTTCACCACCGGGAATCACTCTCCGGTGATATCGAGGCCCCTCCTGTT CCATTGGCGTCTCGAGTCAGACTTTGGTTTGCCCAGGGCCGTTGGAACGAAAAGGAGCATGCTTGCGTTTACATC AGCAGCAATGTTTCCTTTGGGTTTGCTTTCGCGACTGATGTTATTGTTGAGCAACATAAATTTTACAACCAGGAT GTTCCAATTATATATCAGCTGCTGCTCATAATTTCCACTCAAGTTTTGGGATATGCATTCGCGGGTCTAACTCGA CGATTCCTCGTGCGGCCATCGGCTATGATCTGGCCGGGGACCCTGATGTCCACTGCAATGTTCTCTACAATGCAC AAGTCTGTCAACAAAAAGGCAAATGGGTGGAGTATCTCCCGATATAAGTTCTTCGTCGTTGTGTGGGCAGGGGCC TTTCTCTGGTATTTTGTCCCGGGACTGTTGATGCCTGCTCTGAGTTATTTTAATGTGATCACTTGGTTGGCACCC AAAAATGTGGTGATTTCGAATTTGTTTGGTGTTGCCTCTGGTCTCGGAATGTTTCCCTTGACCTTCGATTGGGCT CAGATTGCCTATATTGGCTCACCGTTACTCACGCCCTGGTGGGCTGCAGCTAATATTGTCACGGGACTGGTGGTT GTCATCTGGATAGCCGCCCCAATACTTTATTATAAAAATGTGCTTTTCTCTGCATATATGCCCATAGTTTCAACA GCTGTGTTCGACAATTCCGGGCGACCATACAACGTGAGCCGAATATTGACCACGGATTTTTTGTTTGATGAAAAG GCCTATCAAGATTACTCCCCAGTTTATCTCCCAATCACCTACGTGCTGTCTTACGGTGTTCAGTTTGCTGCTTTG ACATCCCTTGTCTCTCACACCATTTGCTGGTATGGCAAGGACATTTGGCAACAGACTAGGAAGGCCTTTGAGGAA AAACGGCAAGTGCCAGACATGGAGACGTACCAGCCCCTTCGTGGAAGCAATGATGCTCCCCGACAGAGTTATGAA ATCCCAAGGACTAGCTCACGTGAAGCGAGCCAGGACATTCCATTGGGAGGGGAAGATGTTCATTGTCGCTTGATG AGGCGCTATAAGGACGCTCCCCTCATGTGGTATCTTGTTGTGTTCGTTTCTATGCTTGTCATTGCCATCTTCACG GTGGAATATTACCCAACACATTTACCTTGGTATGGCCTACTCCTGGCTCTTGGTATTACTTCTGTGTTTTTCATC CCAGTGGGTATCATCATGGCTGTCACCAATCAACATAGCAGCCTCTATCTGATCTGCCAACTCCTTTGCGGTATT GTATTCCCGGGAAGGCCTGTAGCGAACATGATTTTCGTGACCTACTCATATATCAGCTCTGCACAAGGGATCAAA TTTTCCTCGGACCTCAAGCTCGGCCATTACATGAAGATCCCACCACGAATTCTGTTTGGCGTGCAGATGATGGCG ACTTTAGTCTCGAGTCTGACCCAAATTGGTGTGCTGAACTGGATGTTCACTTTTGTCCCGGGGCTTTGCACCCCA GAGGCTATCAATGGTTTCAACTGCCCCATTGCTCGAGTCCATTTCAACGGCAGCATTCTCTGGGGAGTCGTTGGC CCGCAGCGCTTCTTTGGCCCAGGAGGGCTATACCGTCCGCTTGTCTGGGCCTTTTTGATAGGAGCCATCGCCCCT CTCGGAGCGTGGCTTCTGGGAAGACACAGCAAGAAGAGTTTCTGGCGTATGGTCAACTTCCCTATCTTGTTTGGC AGTCTGAGCTGGATCCCACCTGCAACCGGGCTCAACTTTTCCATCTGGGCCCTTGTATGTTTTGTGTTCAATTAT GTGATCCGGCGAAGGAGGACCGCATGGTGGGAAAAATATGCAATGACATTGTCGGCCGCATTGGATTCCGGGTTG GCATTCTCAGTGGTCGTTGTCTTCTTCGCCTTCATTTACCCGGGATGGGTCGATGGTTTCAAATGGTGGGGGACG GAGATTTATAAACAGGGCTGTGATTGGATTGCTTGTCCATACAAACCACTGGAACCGGGTCAACGATTCGGTCAG TAG |
Gene | >Pro_DTO377G3_2|g6068.t1 ATGTCGGGCGCCCCTCTTCTTCGTTCATCGCCCGTCCTGGGCGCTCCCTCTTACGGAGCATTGCGAGACCCGGAC GGCTCAGAAGAGGACACACCCGTTTCGCGTGGGCCGAAAGTTCGTGGGGGGTTACACCGCGCGAGCTTCGGAGAT GGCATCGGAAGTTCTTCCAACGTACCAGGGTCTACTCCGAGACGATCACATTCCTTTGTCAGACAACGAAACAGC TTATATGCAGAGAGAAATCGTCGGCCTTCCTCCGCCGCGTCCGATGTGGGAATGGGTCCTGATTCGAAATACTCG TTCGCTACTGGATTGGCTGTACCGGGTAACCCGGTGATGCAGGAGACTCCGGCGTCTTCACCATATATGACAAGT GATGATGAAAATGTCCTCGACATTGATGATGATGATTCAAAATCCTCGGATGAGGATCCTCCAGACAATTCGCCG TATGCCCAAGTTCGGGCTTCCGTTCCGGCGACAGATGATTTCTCTCTTTCTATTAACAGTAGGCTTTCTTTCTGG TGCTTTTTCTCCTTATATCTAATGATCTCTAGCACCTCGAATGTGGATTCTTTCGTTGTTATTCTCTTTGACGGG GTCTGCCGCCAATCTTTTCTTTTCCTTGCGCTATCCCAGTGTTGCCATTACACCAATCATTGCTCTTGTTCTAGT CCATCCACTGGGCAAATTTTGGGATTTAATTTTCAGACAAACAGGTGATCCGCTCGAGTTTTTTGAAAACGGAAC CCTTCACCACCGGGAATCACTCTCCGGTGATATCGAGGCCCCTCCTGTTCCATTGGCGTCTCGAGTCAGACTTTG GTTTGCCCAGGGCCGTTGGAACGAAAAGGAGCATGCTTGCGTTTACATCAGCAGCAATGTTTCCTTTGGGTTTGC TTTCGCGACTGATGTTAGTAGACCAACGAAATACTCATGACGAAGCTGACCCAAGACAGGTTATTGTTGAGCAAC ATAAATTTTACAACCAGGATGTTCCAATTATATATCAGCTGCTGCTCATAATTTCCACTCAAGTTTTGGGATATG CATTCGCGGGTCTAACTCGACGATTCCTCGTGCGGCCATCGGCTATGATCTGGCCGGGGACCCTGATGTCCACTG CAATGTTCTCTACAATGCACAAGTCTGTCAACAAAAAGGCAAATGGGTGGAGTATCTCCCGATATAAGTTCTTCG TCGTTGTGTGGGCAGGGGCCTTTCTCTGGTATTTTGTCCCGGGACTGTTGATGCCTGCTCTGAGTTATTTTAATG TGATCACTTGGTTGGCACCCAAAAATGTGGTGATTTCGAATTTGGTAAGACATTCAGGTCCTCTTTTTAAGCTGC TATAGCTAACTCTCTTTAGTTTGGTGTTGCCTCTGGTCTCGGAATGTTTCCCTTGACCTTCGATTGGGCTCAGAT TGCCTATATTGGCTCACCGTTACTCACGCCCTGGTGGGCTGCAGCTAATATTGTCACGGGACTGGTGGTTGTCAT CTGGATAGCCGCCCCAATACTTTGTAAGGCCCCCCCGTCTTATCTAATTTGACTCTGCTGATCAAATGAAGATTA TAAAAATGTGCTTTTCTCTGCATATATGCCCATAGTTTCAACAGCTGTGTTCGACAATTCCGGGCGACCATACAA CGTGAGCCGAATATTGACCACGGATTTTTTGTTTGATGAAAAGGCCTATCAAGATTACTCCCCAGTTTATCTCCC AATCACCTACGTGCTGTCTTACGGTGTTCAGTTTGCTGCTTTGACATCCCTTGTCTCTCACACCATTTGCTGGTA TGGCAAGGACATTTGGCAACAGACTAGGAAGGCCTTTGAGGAAAAACGGCAAGTGCCAGACATGGAGACGTACCA GCCCCTTCGTGGAAGCAATGATGCTCCCCGACAGAGTTATGAAATCCCAAGGACTAGCTCACGTGAAGCGAGCCA GGACATTCCATTGGGAGGGGAAGATGTTCATTGTCGCTTGATGAGGCGCTATAAGGACGCTCCCCTCATGTGGTA TCTTGTTGTGTTCGTTTCTATGCTTGTCATTGCCATCTTCACGGTGGAATAGTACGTTTTCAATCCCCCTTGACC TTCGATAGCAACTAACCTGCACAAAAGTTACCCAACACATTTACCTTGGTATGGCCTACTCCTGGCTCTTGGTAT TACTTCTGTGTTTTTCATCCCAGTGGGTATCATCATGGCTGTCACCAATCAACATAGCAGCCTCTATCTGATCTG CCAACTCCTTTGCGGTATTGTATTCCCGGGAAGGCCTGTAGCGAACATGATTTTCGTGACCTACTCATATATCAG CTCTGCACAAGGGATCAAATTTTCCTCGGACCTCAAGCTCGGCCATTACATGAAGATCCCACCACGAATTCTGTT TGGCGTGCAGATGATGGCGACTTTAGTCTCGAGTCTGACCCAAATTGGTGTGCTGAACTGGATGTTCACTTTTGT CCCGGGGCTTTGCACCCCAGAGGCTATCAATGGTTTCAACTGCCCCATTGCTCGAGTCCATTTCAACGGCAGCAT TCTCTGGGGAGTCGTTGGCCCGCAGCGCTTCTTTGGCCCAGGAGGGCTATACCGTCCGCTTGTCTGGGCCTTTTT GATAGGAGCCATCGCCCCTCTCGGAGCGTGGCTTCTGGGAAGACACAGCAAGAAGAGTTTCTGGCGTATGGTCAA CTTCCCTATCTTGTTTGGCAGTCTGAGCTGGATCCCACCTGCAACCGGGCTCAACTTTTCCATCTGGGCCCTTGT ATGTTTTGTGTTCAATTATGTGATCCGGCGAAGGAGGACCGCATGGTGGGAAAAATATGCAATGACATTGTCGGC CGCATTGGATTCCGGGTTGGCATTCTCAGTGGTCGTTGTCTTCTTCGCCTTCATTTACCCGGGATGGGTCGATGG TTTCAAATGGTGGGGGACGGAGATTTATAAACAGGTACGTCCTTGGTCTTCTGGTTGTTTTTGGTCCCTACTAAT TGTGTCAAGGGCTGTGATTGGATTGCTTGTCCATACAAACCACTGGAACCGGGTCAACGATTCGGTCAGTAG |