Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6060.t1
Gene name
Locationscaffold_15:502169..503468
Strand+
Gene length (bp)1299
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02779 Transket_pyr Transketolase, pyrimidine binding domain 1.2E-43 49 224
PF02780 Transketolase_C Transketolase, C-terminal domain 8.1E-35 243 366

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6060.t1
MAAPRLFRPTARLFSSRLASTALRSNIRQSACAPSILRRGYATETGTKEVTVRDALNEALAEELEREKKCYIIGE
EVAQYNGAYKVTRGLLDRFGPKRVIDTPITEAGFCGIAVGSALAGLHPVCEFMTFNFAMQAIDQIINSGARTHYM
SGGIQPCNITFRGPNGFAAGVAAQHSQDFSGWYGSIPGLKVVSPWSSEDAKGLLKAAIRDPNPVVVLENELLYGQ
HFPMSEAAQKNDFVIPIGKAKIERPGKDLTIVCISRCVGLSLDAAAELKEKYGVDAEVINLRSIKPLDVETIIAS
LKKTGRILAVESGYPMYGLSSEILAQCMEYGFDYLTAPAVRVTGAEVPTPYAAGLEAMAFPQVDTIVGQAVKLLR
L*
Coding >Pro_DTO377G3_2|g6060.t1
ATGGCAGCTCCACGACTTTTCCGCCCAACAGCTCGTCTGTTCTCATCGCGCCTTGCTTCCACTGCTCTGCGCTCG
AATATCCGCCAGTCTGCCTGTGCTCCTTCAATCCTGCGCCGCGGATATGCCACTGAGACCGGCACCAAGGAGGTC
ACCGTTCGCGATGCCTTGAACGAGGCCTTGGCAGAGGAGTTGGAACGCGAAAAGAAGTGCTACATTATCGGTGAG
GAAGTCGCACAGTACAACGGCGCATACAAGGTGACGAGGGGCCTGCTCGATCGCTTCGGTCCTAAGCGGGTTATC
GATACTCCCATCACAGAGGCCGGCTTCTGTGGTATCGCCGTCGGTTCTGCTCTTGCTGGCCTCCACCCTGTTTGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCCATCGATCAGATTATCAACTCCGGTGCTAGAACTCACTACATG
TCCGGTGGTATTCAGCCTTGCAACATCACTTTCCGCGGTCCCAACGGTTTCGCCGCCGGTGTCGCTGCCCAGCAC
TCCCAGGATTTCTCCGGCTGGTACGGCAGCATTCCCGGTTTGAAGGTTGTCTCCCCTTGGAGCTCCGAGGATGCC
AAGGGTCTGCTGAAGGCTGCTATTCGCGACCCTAACCCCGTTGTTGTTCTGGAGAACGAGCTCTTGTACGGCCAG
CATTTCCCTATGAGCGAGGCTGCCCAGAAGAACGACTTCGTCATTCCCATCGGTAAGGCCAAGATTGAGCGCCCC
GGAAAGGACCTTACCATCGTCTGCATATCTCGCTGCGTCGGTCTGTCTTTGGACGCCGCCGCCGAGCTCAAGGAG
AAGTACGGCGTCGACGCTGAGGTTATCAACCTGCGCTCCATTAAGCCTCTCGATGTTGAGACCATCATTGCCTCC
CTCAAGAAGACCGGCCGCATCCTGGCCGTCGAGTCTGGCTACCCTATGTACGGTCTTTCTTCCGAGATCCTGGCT
CAGTGCATGGAGTACGGCTTCGATTATCTGACTGCCCCTGCCGTCCGTGTCACCGGTGCTGAGGTTCCTACTCCT
TATGCCGCTGGTCTTGAGGCCATGGCCTTCCCCCAGGTGGACACTATTGTTGGCCAGGCCGTCAAGCTTCTGCGC
TTGTAA
Transcript >Pro_DTO377G3_2|g6060.t1
ATGGCAGCTCCACGACTTTTCCGCCCAACAGCTCGTCTGTTCTCATCGCGCCTTGCTTCCACTGCTCTGCGCTCG
AATATCCGCCAGTCTGCCTGTGCTCCTTCAATCCTGCGCCGCGGATATGCCACTGAGACCGGCACCAAGGAGGTC
ACCGTTCGCGATGCCTTGAACGAGGCCTTGGCAGAGGAGTTGGAACGCGAAAAGAAGTGCTACATTATCGGTGAG
GAAGTCGCACAGTACAACGGCGCATACAAGGTGACGAGGGGCCTGCTCGATCGCTTCGGTCCTAAGCGGGTTATC
GATACTCCCATCACAGAGGCCGGCTTCTGTGGTATCGCCGTCGGTTCTGCTCTTGCTGGCCTCCACCCTGTTTGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCCATCGATCAGATTATCAACTCCGGTGCTAGAACTCACTACATG
TCCGGTGGTATTCAGCCTTGCAACATCACTTTCCGCGGTCCCAACGGTTTCGCCGCCGGTGTCGCTGCCCAGCAC
TCCCAGGATTTCTCCGGCTGGTACGGCAGCATTCCCGGTTTGAAGGTTGTCTCCCCTTGGAGCTCCGAGGATGCC
AAGGGTCTGCTGAAGGCTGCTATTCGCGACCCTAACCCCGTTGTTGTTCTGGAGAACGAGCTCTTGTACGGCCAG
CATTTCCCTATGAGCGAGGCTGCCCAGAAGAACGACTTCGTCATTCCCATCGGTAAGGCCAAGATTGAGCGCCCC
GGAAAGGACCTTACCATCGTCTGCATATCTCGCTGCGTCGGTCTGTCTTTGGACGCCGCCGCCGAGCTCAAGGAG
AAGTACGGCGTCGACGCTGAGGTTATCAACCTGCGCTCCATTAAGCCTCTCGATGTTGAGACCATCATTGCCTCC
CTCAAGAAGACCGGCCGCATCCTGGCCGTCGAGTCTGGCTACCCTATGTACGGTCTTTCTTCCGAGATCCTGGCT
CAGTGCATGGAGTACGGCTTCGATTATCTGACTGCCCCTGCCGTCCGTGTCACCGGTGCTGAGGTTCCTACTCCT
TATGCCGCTGGTCTTGAGGCCATGGCCTTCCCCCAGGTGGACACTATTGTTGGCCAGGCCGTCAAGCTTCTGCGC
TTGTAA
Gene >Pro_DTO377G3_2|g6060.t1
ATGGCAGCTCCACGACTTTTCCGCCCAACAGCTCGTCTGTTCTCATCGCGCCTTGCTTCCACTGCTCTGCGCTCG
AATATCCGCCAGTCTGCCTGTGCTCCTTCAATCCTGCGCCGCGGATATGCCACTGAGACCGGCACCAAGGAGGTC
ACCGTTCGCGATGCCTTGAACGAGGCCTTGGCAGAGGAGTTGGAACGCGAAAAGAAGTGCTACATTATCGGTGAG
GAAGTCGCACAGTACAACGGCGCGTGAGTAATCCTCTAAGCTTCATTTGAATCGAAACTGACGTTGAACTTCCTG
TACAGATACAAGGTGACGAGGGGCCTGCTCGATCGCTTCGGTCCTAAGCGGGTTATCGATACTCCCATCACAGAG
GCCGGCTTCTGTGGTATCGCCGTCGGTTCTGCTCTTGCTGGCCTCCACCCTGTTGTGAGTATTTATGAAAATTAC
GGTTGATCGAGGATCGCATACTAATCGTTCATGATCTAGTGCGAGTTCATGACCTTCAACTTCGCCATGCAGGCC
ATCGATCAGATTATCAACTCCGGTGCTAGAACTCACTACATGTCCGGTGGTATTCAGCCTTGCAACATCACTTTC
CGCGGTCCCAACGGTTTCGCCGCCGGTGTCGCTGCCCAGCACTCCCAGGATTTCTCCGGCTGGTACGGCAGCATT
CCCGGTTTGAAGGTTGTCTCCCCTTGGAGCTCCGAGGATGCCAAGGGTCTGCTGAAGGCTGCTATTCGCGACCCT
AACCCCGTTGTTGTTCTGGAGAACGAGTAAGATTCCATTCCATCTTGCCAAATTTCGTGTAAACTAACCAATGCT
AGGCTCTTGTACGGCCAGCATTTCCCTATGAGCGAGGCTGCCCAGAAGAACGACTTCGTCATTCCCATCGGTAAG
GCCAAGATTGAGCGCCCCGGAAAGGACCTTACCATCGTCTGCATATCTCGCTGCGTCGGTCTGTCTTTGGACGCC
GCCGCCGAGCTCAAGGAGAAGTACGGCGTCGACGCTGAGGTTATCAACCTGCGCTCCATTAAGCCTCTCGATGTT
GAGACCATCATTGCCTCCCTCAAGAAGACCGGCCGCATCCTGGCCGTCGAGTCTGGCTACCCTATGTACGGTCTT
TCTTCCGAGATCCTGGCTCAGTGCATGGAGTACGGCTTCGATTATCTGACTGCCCCTGCCGTCCGTGTCACCGGT
GCTGAGGTTCCTACTCCTTATGCCGCTGGTCTTGAGGCCATGGCCTTCCCCCAGGTGGACACTATTGTTGGCCAG
GCCGTCAAGCTTCTGCGCTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail