© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6059.t1 |
| Gene name | |
| Location | scaffold_15:499939..501768 |
| Strand | - |
| Gene length (bp) | 1829 |
| Transcript length (bp) | 1782 |
| Coding sequence length (bp) | 1782 |
| Protein length (aa) | 594 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | 2.8E-09 | 36 | 260 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 15 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 70.55 | 43.08 | 98.02 |
| 5d_25C | Five days - 25 degrees Celsius | 69.51 | 42.60 | 96.42 |
| 7d_25C | Seven days - 25 degrees Celsius | 67.96 | 41.68 | 94.24 |
| 10d_25C | Ten days - 25 degrees Celsius | 85.32 | 52.33 | 118.31 |
| 7d_15C | Seven days - 15 degrees Celsius | 62.93 | 38.51 | 87.35 |
| 7d_30C | Seven days - 30 degrees Celsius | 78.87 | 48.12 | 109.62 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.965913 | no |
| 3d_25C | 7d_25C | 0.912406 | no |
| 3d_25C | 7d_15C | 0.677244 | no |
| 3d_25C | 7d_30C | 0.694175 | no |
| 3d_25C | 10d_25C | 0.441287 | no |
| 5d_25C | 7d_25C | 0.947085 | no |
| 5d_25C | 7d_15C | 0.719473 | no |
| 5d_25C | 7d_30C | 0.639886 | no |
| 5d_25C | 10d_25C | 0.391303 | no |
| 7d_25C | 7d_15C | 0.788413 | no |
| 7d_25C | 7d_30C | 0.565819 | no |
| 7d_25C | 10d_25C | 0.328484 | no |
| 7d_15C | 7d_30C | 0.341526 | no |
| 7d_15C | 10d_25C | 0.163055 | no |
| 7d_30C | 10d_25C | 0.790691 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6059.t1 MMLSLLWLLPTALAAQPSAPDPISAPLRPLDFGQLNFIHTTDTHGWLAGHLQEPSYSADWGDYVSFTTHMREKAE AQGQDLLVIDTGDRVEGNGLYDSSKPKGIYLSDIVRHQHIDLLTSGNHELYQKNTSEAELLITVPNFRGNYLASN IDIIHPTTKQLVPLAPRFKKFTTKNQGIRIVAFGFLFDFNGNYNNTVVQKVSSTIKEDWFQEAIRDKEVDLFLVI GHVPVHSPEYRAIFKEIRGIRWDTPIQFFGGHQHVRDYAQYDSKAFGLASGRFMETVGFMSIDGLASKTSRQSAA GPVFKRRYIDNNLFSYYHHTDLDRETFPTEKGLNVSRMIAKARTDLHLDQVHGCAPHDLWMSRTKYPDPNSIYTW LETEVLRDLKDESRGDIPRLAIVNTGAMRFDIFKGPFTQDSTFIVSPFTSTFRYVKDVPYDKAQLIVDVLNEQPQ VLYETTDESSPTTLAPPEQLAYPEDVIAQKWPSASEQIPLSGPDLVPGYTTQDDAGTDGDDTIHSPISFYRVPNC IRALVSPNASETPKTVDLVYLDFIEKYVILAAKFAGLDVDIAKESDAYMPHVSLTNLILDWVKKNWEC* |
| Coding | >Pro_DTO377G3_2|g6059.t1 ATGATGTTGTCCTTGCTCTGGCTACTTCCGACGGCGCTCGCCGCTCAACCCTCCGCACCCGACCCCATCTCCGCT CCGCTGCGACCACTTGATTTCGGGCAACTGAATTTCATTCATACTACCGATACTCATGGCTGGCTGGCTGGTCAT CTGCAGGAGCCGTCCTACTCCGCAGACTGGGGAGACTATGTATCGTTTACAACACACATGCGGGAAAAGGCAGAA GCACAAGGACAAGATCTACTCGTTATAGATACTGGTGACCGAGTGGAAGGGAACGGCCTATATGACTCGTCCAAG CCCAAGGGTATCTACCTTTCAGACATTGTCCGGCACCAGCACATCGACCTGTTGACGTCGGGAAACCACGAACTA TACCAGAAGAACACATCGGAGGCAGAGCTTCTCATCACCGTTCCAAATTTCCGGGGCAACTATCTCGCTTCGAAT ATCGATATCATTCACCCGACCACAAAACAGCTTGTGCCTCTGGCCCCGCGGTTTAAGAAGTTCACTACCAAGAAT CAAGGCATCCGTATAGTAGCCTTTGGCTTCCTCTTTGATTTCAATGGAAATTACAACAATACTGTGGTCCAGAAA GTATCTTCTACCATCAAGGAGGACTGGTTCCAAGAAGCCATTCGGGATAAAGAAGTGGATCTGTTTTTGGTGATC GGCCATGTGCCTGTTCATTCGCCGGAATACCGGGCGATCTTCAAGGAGATCCGGGGAATTCGTTGGGATACTCCA ATCCAATTCTTCGGTGGGCACCAGCATGTGCGTGACTATGCACAGTATGATTCCAAGGCCTTTGGGCTAGCGAGC GGTCGATTCATGGAAACTGTTGGTTTCATGTCAATCGATGGCCTCGCCAGCAAGACAAGCCGTCAGTCTGCTGCT GGGCCTGTCTTCAAGCGCAGATACATAGACAACAATCTTTTTTCTTATTATCATCACACCGATCTTGATCGAGAG ACCTTCCCAACCGAAAAAGGTCTCAATGTCTCCCGGATGATCGCCAAAGCACGGACCGACCTTCATCTGGACCAA GTCCACGGATGTGCCCCACATGATTTATGGATGTCACGAACCAAGTACCCGGACCCCAACAGCATCTACACCTGG CTTGAAACTGAGGTTTTGCGTGACTTGAAGGATGAGTCTCGTGGAGACATACCTAGGCTAGCCATTGTTAATACG GGCGCTATGAGGTTCGATATCTTCAAAGGGCCCTTTACCCAAGACTCGACTTTTATTGTATCTCCATTCACTAGC ACCTTCCGCTACGTGAAAGATGTCCCATATGATAAGGCACAACTTATTGTCGATGTTTTGAACGAGCAGCCTCAA GTTCTATACGAAACTACGGACGAATCTTCACCGACAACGTTGGCCCCTCCCGAGCAACTTGCATACCCGGAAGAT GTTATTGCCCAAAAATGGCCGTCGGCTAGCGAGCAGATCCCCCTGTCCGGTCCGGATCTCGTGCCCGGGTACACG ACACAAGATGATGCAGGCACAGACGGTGATGATACCATCCATTCACCCATCTCCTTCTACCGAGTGCCAAACTGT ATTCGTGCTCTCGTATCTCCCAATGCATCCGAGACACCGAAGACGGTGGATTTGGTCTACCTTGATTTTATCGAG AAATATGTGATACTGGCTGCTAAATTTGCTGGTCTTGATGTCGATATTGCAAAGGAAAGTGATGCTTACATGCCA CATGTGTCTCTAACAAACCTGATTCTTGACTGGGTGAAGAAGAACTGGGAGTGTTGA |
| Transcript | >Pro_DTO377G3_2|g6059.t1 ATGATGTTGTCCTTGCTCTGGCTACTTCCGACGGCGCTCGCCGCTCAACCCTCCGCACCCGACCCCATCTCCGCT CCGCTGCGACCACTTGATTTCGGGCAACTGAATTTCATTCATACTACCGATACTCATGGCTGGCTGGCTGGTCAT CTGCAGGAGCCGTCCTACTCCGCAGACTGGGGAGACTATGTATCGTTTACAACACACATGCGGGAAAAGGCAGAA GCACAAGGACAAGATCTACTCGTTATAGATACTGGTGACCGAGTGGAAGGGAACGGCCTATATGACTCGTCCAAG CCCAAGGGTATCTACCTTTCAGACATTGTCCGGCACCAGCACATCGACCTGTTGACGTCGGGAAACCACGAACTA TACCAGAAGAACACATCGGAGGCAGAGCTTCTCATCACCGTTCCAAATTTCCGGGGCAACTATCTCGCTTCGAAT ATCGATATCATTCACCCGACCACAAAACAGCTTGTGCCTCTGGCCCCGCGGTTTAAGAAGTTCACTACCAAGAAT CAAGGCATCCGTATAGTAGCCTTTGGCTTCCTCTTTGATTTCAATGGAAATTACAACAATACTGTGGTCCAGAAA GTATCTTCTACCATCAAGGAGGACTGGTTCCAAGAAGCCATTCGGGATAAAGAAGTGGATCTGTTTTTGGTGATC GGCCATGTGCCTGTTCATTCGCCGGAATACCGGGCGATCTTCAAGGAGATCCGGGGAATTCGTTGGGATACTCCA ATCCAATTCTTCGGTGGGCACCAGCATGTGCGTGACTATGCACAGTATGATTCCAAGGCCTTTGGGCTAGCGAGC GGTCGATTCATGGAAACTGTTGGTTTCATGTCAATCGATGGCCTCGCCAGCAAGACAAGCCGTCAGTCTGCTGCT GGGCCTGTCTTCAAGCGCAGATACATAGACAACAATCTTTTTTCTTATTATCATCACACCGATCTTGATCGAGAG ACCTTCCCAACCGAAAAAGGTCTCAATGTCTCCCGGATGATCGCCAAAGCACGGACCGACCTTCATCTGGACCAA GTCCACGGATGTGCCCCACATGATTTATGGATGTCACGAACCAAGTACCCGGACCCCAACAGCATCTACACCTGG CTTGAAACTGAGGTTTTGCGTGACTTGAAGGATGAGTCTCGTGGAGACATACCTAGGCTAGCCATTGTTAATACG GGCGCTATGAGGTTCGATATCTTCAAAGGGCCCTTTACCCAAGACTCGACTTTTATTGTATCTCCATTCACTAGC ACCTTCCGCTACGTGAAAGATGTCCCATATGATAAGGCACAACTTATTGTCGATGTTTTGAACGAGCAGCCTCAA GTTCTATACGAAACTACGGACGAATCTTCACCGACAACGTTGGCCCCTCCCGAGCAACTTGCATACCCGGAAGAT GTTATTGCCCAAAAATGGCCGTCGGCTAGCGAGCAGATCCCCCTGTCCGGTCCGGATCTCGTGCCCGGGTACACG ACACAAGATGATGCAGGCACAGACGGTGATGATACCATCCATTCACCCATCTCCTTCTACCGAGTGCCAAACTGT ATTCGTGCTCTCGTATCTCCCAATGCATCCGAGACACCGAAGACGGTGGATTTGGTCTACCTTGATTTTATCGAG AAATATGTGATACTGGCTGCTAAATTTGCTGGTCTTGATGTCGATATTGCAAAGGAAAGTGATGCTTACATGCCA CATGTGTCTCTAACAAACCTGATTCTTGACTGGGTGAAGAAGAACTGGGAGTGTTGA |
| Gene | >Pro_DTO377G3_2|g6059.t1 ATGATGTTGTCCTTGCTCTGGCTACTTCCGACGGCGCTCGCCGCTCAACCCTCCGCACCCGACCCCATCTCCGCT CCGCTGCGACCACTTGATTTCGGGCAACTGAATTTCATTCATACTACCGATACTCATGGCTGGCTGGCTGGTCAT CTGCAGGAGTAGGCCTTGGACCCTGCTGAGCTCCGAGTTGTACTAATAATCGCAGGCCGTCCTACTCCGCAGACT GGGGAGACTATGTATCGTTTACAACACACATGCGGGAAAAGGCAGAAGCACAAGGACAAGATCTACTCGTTATAG ATACTGGTGACCGAGTGGAAGGGAACGGCCTATATGACTCGTCCAAGCCCAAGGGTATCTACCTTTCAGACATTG TCCGGCACCAGCACATCGACCTGTTGACGTCGGGAAACCACGAACTATACCAGAAGAACACATCGGAGGCAGAGC TTCTCATCACCGTTCCAAATTTCCGGGGCAACTATCTCGCTTCGAATATCGATATCATTCACCCGACCACAAAAC AGCTTGTGCCTCTGGCCCCGCGGTTTAAGAAGTTCACTACCAAGAATCAAGGCATCCGTATAGTAGCCTTTGGCT TCCTCTTTGATTTCAATGGAAATTACAACAATACTGTGGTCCAGAAAGTATCTTCTACCATCAAGGAGGACTGGT TCCAAGAAGCCATTCGGGATAAAGAAGTGGATCTGTTTTTGGTGATCGGCCATGTGCCTGTTCATTCGCCGGAAT ACCGGGCGATCTTCAAGGAGATCCGGGGAATTCGTTGGGATACTCCAATCCAATTCTTCGGTGGGCACCAGCATG TGCGTGACTATGCACAGTATGATTCCAAGGCCTTTGGGCTAGCGAGCGGTCGATTCATGGAAACTGTTGGTTTCA TGTCAATCGATGGCCTCGCCAGCAAGACAAGCCGTCAGTCTGCTGCTGGGCCTGTCTTCAAGCGCAGATACATAG ACAACAATCTTTTTTCTTATTATCATCACACCGATCTTGATCGAGAGACCTTCCCAACCGAAAAAGGTCTCAATG TCTCCCGGATGATCGCCAAAGCACGGACCGACCTTCATCTGGACCAAGTCCACGGATGTGCCCCACATGATTTAT GGATGTCACGAACCAAGTACCCGGACCCCAACAGCATCTACACCTGGCTTGAAACTGAGGTTTTGCGTGACTTGA AGGATGAGTCTCGTGGAGACATACCTAGGCTAGCCATTGTTAATACGGGCGCTATGAGGTTCGATATCTTCAAAG GGCCCTTTACCCAAGACTCGACTTTTATTGTATCTCCATTCACTAGCACCTTCCGCTACGTGAAAGATGTCCCAT ATGATAAGGCACAACTTATTGTCGATGTTTTGAACGAGCAGCCTCAAGTTCTATACGAAACTACGGACGAATCTT CACCGACAACGTTGGCCCCTCCCGAGCAACTTGCATACCCGGAAGATGTTATTGCCCAAAAATGGCCGTCGGCTA GCGAGCAGATCCCCCTGTCCGGTCCGGATCTCGTGCCCGGGTACACGACACAAGATGATGCAGGCACAGACGGTG ATGATACCATCCATTCACCCATCTCCTTCTACCGAGTGCCAAACTGTATTCGTGCTCTCGTATCTCCCAATGCAT CCGAGACACCGAAGACGGTGGATTTGGTCTACCTTGATTTTATCGAGAAATATGTGATACTGGCTGCTAAATTTG CTGGTCTTGATGTCGATATTGCAAAGGAAAGTGATGCTTACATGCCACATGTGTCTCTAACAAACCTGATTCTTG ACTGGGTGAAGAAGAACTGGGAGTGTTGA |