Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6037.t1
Gene name
Locationscaffold_15:454039..454765
Strand+
Gene length (bp)726
Transcript length (bp)726
Coding sequence length (bp)726
Protein length (aa) 242

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01300 Sua5_yciO_yrdC Telomere recombination 1.7E-13 28 215

GO

GO Term Description Terminal node
GO:0003725 double-stranded RNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003723 RNA binding No
GO:0003676 nucleic acid binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6037.t1
MEPFKDKIIPGPGDLPNVRADAQRVFQVLESGGVVILPTEVGYGLMATSAEAIDRAFAAKRRRPGHAQGLYGTHE
LHRELHILDDQRFEMTRVLVEDLDMSFMAVGPCRNGHHLLRALSPQTLSKVTKDGTIAMFISCSSLLREICRLNA
TSGQLMVGSSANVSGGGQKFRVEDIEDELKEAADLIVDYGLQRYHVYGRPSLIMDFDQMKILRMGSCYELFRERM
RKFWGVDLPEDPDYRA*
Coding >Pro_DTO377G3_2|g6037.t1
ATGGAGCCCTTCAAAGACAAGATAATTCCTGGCCCTGGAGATCTCCCCAACGTCCGTGCAGATGCCCAACGCGTT
TTCCAGGTCCTCGAGTCAGGAGGTGTGGTTATTCTACCGACCGAAGTGGGCTACGGACTGATGGCCACTTCTGCG
GAGGCCATTGACCGTGCCTTCGCCGCGAAGCGACGCCGGCCAGGTCACGCTCAGGGTCTATATGGCACACATGAA
TTGCACCGGGAACTTCACATCCTGGACGACCAGCGGTTTGAAATGACACGTGTGCTAGTCGAAGACCTAGACATG
AGCTTCATGGCTGTTGGGCCATGCCGCAACGGTCATCATCTTCTTCGGGCTTTATCCCCACAAACCCTCTCTAAG
GTCACAAAGGACGGCACTATCGCTATGTTCATCAGCTGCAGTTCACTTCTGAGAGAGATTTGCAGACTGAATGCT
ACATCAGGCCAGCTCATGGTAGGCTCTAGTGCAAACGTGTCAGGTGGTGGGCAGAAATTCCGTGTCGAAGATATT
GAGGATGAACTCAAGGAGGCGGCGGATTTGATTGTCGATTATGGTCTGCAACGCTATCATGTATATGGACGACCT
TCTCTCATCATGGATTTTGACCAGATGAAGATTTTGCGAATGGGGTCATGTTATGAACTGTTCCGCGAGCGCATG
CGGAAGTTTTGGGGGGTCGACTTGCCTGAGGACCCTGATTATCGTGCTTGA
Transcript >Pro_DTO377G3_2|g6037.t1
ATGGAGCCCTTCAAAGACAAGATAATTCCTGGCCCTGGAGATCTCCCCAACGTCCGTGCAGATGCCCAACGCGTT
TTCCAGGTCCTCGAGTCAGGAGGTGTGGTTATTCTACCGACCGAAGTGGGCTACGGACTGATGGCCACTTCTGCG
GAGGCCATTGACCGTGCCTTCGCCGCGAAGCGACGCCGGCCAGGTCACGCTCAGGGTCTATATGGCACACATGAA
TTGCACCGGGAACTTCACATCCTGGACGACCAGCGGTTTGAAATGACACGTGTGCTAGTCGAAGACCTAGACATG
AGCTTCATGGCTGTTGGGCCATGCCGCAACGGTCATCATCTTCTTCGGGCTTTATCCCCACAAACCCTCTCTAAG
GTCACAAAGGACGGCACTATCGCTATGTTCATCAGCTGCAGTTCACTTCTGAGAGAGATTTGCAGACTGAATGCT
ACATCAGGCCAGCTCATGGTAGGCTCTAGTGCAAACGTGTCAGGTGGTGGGCAGAAATTCCGTGTCGAAGATATT
GAGGATGAACTCAAGGAGGCGGCGGATTTGATTGTCGATTATGGTCTGCAACGCTATCATGTATATGGACGACCT
TCTCTCATCATGGATTTTGACCAGATGAAGATTTTGCGAATGGGGTCATGTTATGAACTGTTCCGCGAGCGCATG
CGGAAGTTTTGGGGGGTCGACTTGCCTGAGGACCCTGATTATCGTGCTTGA
Gene >Pro_DTO377G3_2|g6037.t1
ATGGAGCCCTTCAAAGACAAGATAATTCCTGGCCCTGGAGATCTCCCCAACGTCCGTGCAGATGCCCAACGCGTT
TTCCAGGTCCTCGAGTCAGGAGGTGTGGTTATTCTACCGACCGAAGTGGGCTACGGACTGATGGCCACTTCTGCG
GAGGCCATTGACCGTGCCTTCGCCGCGAAGCGACGCCGGCCAGGTCACGCTCAGGGTCTATATGGCACACATGAA
TTGCACCGGGAACTTCACATCCTGGACGACCAGCGGTTTGAAATGACACGTGTGCTAGTCGAAGACCTAGACATG
AGCTTCATGGCTGTTGGGCCATGCCGCAACGGTCATCATCTTCTTCGGGCTTTATCCCCACAAACCCTCTCTAAG
GTCACAAAGGACGGCACTATCGCTATGTTCATCAGCTGCAGTTCACTTCTGAGAGAGATTTGCAGACTGAATGCT
ACATCAGGCCAGCTCATGGTAGGCTCTAGTGCAAACGTGTCAGGTGGTGGGCAGAAATTCCGTGTCGAAGATATT
GAGGATGAACTCAAGGAGGCGGCGGATTTGATTGTCGATTATGGTCTGCAACGCTATCATGTATATGGACGACCT
TCTCTCATCATGGATTTTGACCAGATGAAGATTTTGCGAATGGGGTCATGTTATGAACTGTTCCGCGAGCGCATG
CGGAAGTTTTGGGGGGTCGACTTGCCTGAGGACCCTGATTATCGTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail