Protein ID | Pro_DTO377G3_2|g603.t1 |
Gene name | |
Location | scaffold_01:1547875..1550964 |
Strand | - |
Gene length (bp) | 3089 |
Transcript length (bp) | 2904 |
Coding sequence length (bp) | 2904 |
Protein length (aa) | 968 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00628 | PHD | PHD-finger | 3.8E-10 | 528 | 572 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g603.t1 MSWSLVTSEMRENEMLYLSGEADKASKEKKDAVAAQPLPPAPTGSTQSERRQSSSKPAQRRKLQKKPPGTSKPTT QYRTMKPIGEYPSPVEYRAAGVAPPSERAHSVATVPTNVPRDEAERLSPVSGVESPPTDKGHVEIAEEAALASTS TGAETVADESIRSTTPADAATPTLPSADITHKYLAVLMSLPLRLSDKYDLVKLRGVMKFAIISSIENDNEWCVVG LLYFWSNAMDDEFKLSLIANLSENDGGDKQLQLALQTILNNSLIEAQRWYQKYVRSTANAADIPSCSESSQPAVN SVGAEPSFKVSDIYRDTSGPRVEENFLSGKSNTAPLKRPKKPCRVNENAYKRKRQWEMDPDHEEKMRAVRARLEA ESYSEAVVQYSAIRTQIGPPDAIQHPYDMENIDAGIDGDIDAFNRARSLPVPGSILDIPLVKGPEPTAPSVYSDG ASAIARKTGKPVSRRQREKAKGPEVPQRARSLSVDTTVSSLSSLSNSAYSVRFNDWSGGHEARQMPNSIEPPENS DDCHQCGKGGDLLCCDTCINSYHFECLDPPLDPKNPPQGEWHCPKCSIRNSFSTLIAHSKHYKKTEFQPPQDIKE HFHGVDEGIVFDGDYARNLKHQRYYKAAPHLPRLTKAPKQDGPTIYANPMLLREYDNKGDCIRCSKCGFTSQGIH PIITCDYCPCRFHLDCLDPPRAHPPNPKVGWMCPNHVTPDDMIATKEINGSNERTRRVRRTKNMAYIDCDIMLPD DPNQSLFDEDWRDKRARFLGGDVVLNFITAVKEDHHEREKEYARIVERKCLELTKQLTSDYLNRAENAGITNNIA QNGLPAEFTQNVSHAVNNMIAGAPVSTEEFDAATTLLSMATSQPPAVGEGHIAEAAGPTSPVAQKPLSRIDEEST LGSSHAPTSPPLGTSHPPNASSDAESHHSDSELLPRIPVFNRNKRSRADDHGSAGERAQKRQYTKSK* |
Coding | >Pro_DTO377G3_2|g603.t1 ATGAGCTGGTCACTGGTCACTTCTGAGATGAGGGAGAACGAGATGTTGTATCTTTCAGGCGAAGCCGACAAGGCA TCGAAGGAAAAGAAAGATGCTGTTGCTGCCCAGCCCCTTCCGCCTGCCCCTACGGGGTCCACTCAGTCCGAACGC CGTCAGAGCTCTTCCAAACCCGCGCAACGACGGAAGCTTCAGAAGAAGCCCCCGGGCACTTCGAAGCCCACCACC CAGTATCGGACAATGAAACCGATTGGGGAATACCCATCGCCCGTGGAGTACCGAGCTGCTGGCGTGGCTCCTCCG TCTGAACGGGCCCACAGCGTCGCGACCGTGCCGACCAACGTCCCGCGCGACGAAGCTGAGCGCCTTTCCCCCGTT AGCGGGGTTGAGAGCCCGCCGACTGACAAGGGTCATGTTGAAATCGCCGAAGAAGCGGCACTTGCCTCAACCTCG ACTGGGGCCGAGACCGTGGCCGATGAGTCTATTCGCAGCACCACCCCAGCCGATGCGGCCACTCCTACCCTCCCG AGCGCGGACATCACCCACAAGTACCTCGCCGTGCTGATGTCTCTTCCTTTGCGCCTCTCCGACAAATATGATCTT GTCAAACTACGGGGCGTCATGAAGTTCGCCATAATCAGCTCAATCGAGAACGACAACGAGTGGTGTGTCGTTGGC CTTCTTTACTTCTGGTCCAATGCCATGGATGATGAATTCAAACTCTCTTTGATTGCCAACCTCTCCGAAAATGAC GGAGGAGACAAACAGTTGCAACTTGCTCTCCAAACGATCCTTAACAATTCTCTGATAGAAGCCCAAAGGTGGTAT CAGAAATACGTTCGCTCTACGGCCAATGCAGCCGATATTCCTTCCTGCAGCGAATCAAGTCAGCCAGCTGTCAAT TCTGTTGGTGCAGAGCCTAGCTTCAAGGTCTCCGACATCTATCGCGACACAAGTGGTCCTCGGGTTGAAGAAAAC TTCCTGAGCGGCAAATCAAATACCGCTCCGCTCAAGAGGCCCAAGAAGCCATGCCGCGTCAACGAGAATGCCTAC AAGCGTAAGCGCCAGTGGGAAATGGATCCTGATCATGAGGAAAAGATGCGTGCTGTGCGTGCTCGTCTCGAAGCA GAGTCTTACTCGGAGGCGGTTGTCCAGTACAGTGCAATCCGAACTCAGATCGGTCCACCAGATGCAATCCAGCAT CCCTACGACATGGAGAACATTGATGCGGGTATCGATGGGGACATCGACGCGTTCAATCGTGCGCGTTCTCTCCCT GTTCCGGGTTCAATCCTCGATATACCTCTTGTAAAGGGTCCGGAGCCCACGGCTCCCTCTGTCTATTCAGATGGT GCTTCGGCTATCGCTCGCAAGACTGGGAAGCCCGTCTCGCGACGTCAGAGAGAAAAGGCCAAGGGCCCTGAGGTC CCACAGCGTGCACGGTCGCTGTCTGTTGATACCACAGTCTCAAGTCTCTCGTCACTTTCGAATTCTGCTTACTCG GTCCGATTCAATGATTGGTCTGGCGGCCATGAAGCACGCCAAATGCCGAATTCTATTGAACCCCCCGAGAACAGC GACGACTGCCACCAATGTGGAAAAGGTGGCGATTTGCTCTGCTGCGACACATGCATCAACTCATACCATTTCGAA TGCTTGGATCCTCCCTTGGATCCCAAGAATCCTCCGCAGGGAGAGTGGCATTGCCCCAAGTGCTCCATTCGCAAC AGCTTCTCGACCTTGATTGCACACTCCAAACACTACAAGAAGACAGAGTTCCAACCTCCTCAGGATATCAAGGAG CATTTCCATGGAGTGGATGAAGGAATTGTGTTTGATGGCGACTATGCCCGGAATTTAAAGCATCAACGCTACTAC AAGGCCGCGCCCCACCTGCCGCGGCTGACTAAAGCACCGAAGCAAGACGGCCCTACCATTTACGCGAATCCCATG CTTCTCCGAGAATACGACAACAAGGGAGACTGCATCCGTTGCTCCAAGTGTGGTTTTACATCCCAAGGTATACAT CCCATTATTACTTGCGACTACTGTCCTTGCCGCTTCCATCTGGATTGTCTTGATCCTCCCCGCGCACATCCCCCT AACCCCAAGGTCGGGTGGATGTGTCCTAACCATGTCACTCCTGACGATATGATTGCCACCAAGGAGATTAATGGC AGCAACGAGCGTACGCGCCGTGTTCGCCGAACCAAGAACATGGCGTACATTGATTGTGACATCATGCTTCCTGAC GACCCAAATCAGAGTTTGTTTGATGAAGACTGGAGAGACAAAAGGGCCCGTTTCCTCGGAGGCGATGTCGTTTTG AACTTCATCACTGCTGTCAAGGAAGATCATCACGAACGTGAAAAGGAGTATGCACGAATTGTCGAGCGAAAGTGC TTGGAGTTGACCAAGCAACTCACCAGCGATTACCTCAACCGCGCTGAAAACGCTGGGATCACCAACAACATCGCA CAGAACGGTCTTCCCGCGGAGTTCACCCAGAATGTTTCTCACGCTGTTAACAACATGATAGCTGGCGCTCCTGTT TCCACTGAAGAATTCGACGCTGCCACTACTCTCCTCAGCATGGCTACAAGCCAGCCTCCTGCTGTCGGCGAAGGT CACATCGCCGAAGCTGCCGGGCCTACCTCGCCCGTTGCTCAGAAGCCTCTGTCTCGCATTGACGAGGAGTCTACC TTGGGCTCTTCTCATGCTCCCACCTCTCCTCCCCTCGGCACCTCTCACCCTCCCAACGCATCTTCGGATGCCGAG TCCCACCATTCGGACTCCGAGCTTCTCCCCCGGATCCCTGTGTTCAATCGGAACAAGCGATCTCGCGCTGATGAC CATGGATCAGCCGGAGAGCGGGCGCAAAAGCGCCAATACACCAAGTCCAAGTGA |
Transcript | >Pro_DTO377G3_2|g603.t1 ATGAGCTGGTCACTGGTCACTTCTGAGATGAGGGAGAACGAGATGTTGTATCTTTCAGGCGAAGCCGACAAGGCA TCGAAGGAAAAGAAAGATGCTGTTGCTGCCCAGCCCCTTCCGCCTGCCCCTACGGGGTCCACTCAGTCCGAACGC CGTCAGAGCTCTTCCAAACCCGCGCAACGACGGAAGCTTCAGAAGAAGCCCCCGGGCACTTCGAAGCCCACCACC CAGTATCGGACAATGAAACCGATTGGGGAATACCCATCGCCCGTGGAGTACCGAGCTGCTGGCGTGGCTCCTCCG TCTGAACGGGCCCACAGCGTCGCGACCGTGCCGACCAACGTCCCGCGCGACGAAGCTGAGCGCCTTTCCCCCGTT AGCGGGGTTGAGAGCCCGCCGACTGACAAGGGTCATGTTGAAATCGCCGAAGAAGCGGCACTTGCCTCAACCTCG ACTGGGGCCGAGACCGTGGCCGATGAGTCTATTCGCAGCACCACCCCAGCCGATGCGGCCACTCCTACCCTCCCG AGCGCGGACATCACCCACAAGTACCTCGCCGTGCTGATGTCTCTTCCTTTGCGCCTCTCCGACAAATATGATCTT GTCAAACTACGGGGCGTCATGAAGTTCGCCATAATCAGCTCAATCGAGAACGACAACGAGTGGTGTGTCGTTGGC CTTCTTTACTTCTGGTCCAATGCCATGGATGATGAATTCAAACTCTCTTTGATTGCCAACCTCTCCGAAAATGAC GGAGGAGACAAACAGTTGCAACTTGCTCTCCAAACGATCCTTAACAATTCTCTGATAGAAGCCCAAAGGTGGTAT CAGAAATACGTTCGCTCTACGGCCAATGCAGCCGATATTCCTTCCTGCAGCGAATCAAGTCAGCCAGCTGTCAAT TCTGTTGGTGCAGAGCCTAGCTTCAAGGTCTCCGACATCTATCGCGACACAAGTGGTCCTCGGGTTGAAGAAAAC TTCCTGAGCGGCAAATCAAATACCGCTCCGCTCAAGAGGCCCAAGAAGCCATGCCGCGTCAACGAGAATGCCTAC AAGCGTAAGCGCCAGTGGGAAATGGATCCTGATCATGAGGAAAAGATGCGTGCTGTGCGTGCTCGTCTCGAAGCA GAGTCTTACTCGGAGGCGGTTGTCCAGTACAGTGCAATCCGAACTCAGATCGGTCCACCAGATGCAATCCAGCAT CCCTACGACATGGAGAACATTGATGCGGGTATCGATGGGGACATCGACGCGTTCAATCGTGCGCGTTCTCTCCCT GTTCCGGGTTCAATCCTCGATATACCTCTTGTAAAGGGTCCGGAGCCCACGGCTCCCTCTGTCTATTCAGATGGT GCTTCGGCTATCGCTCGCAAGACTGGGAAGCCCGTCTCGCGACGTCAGAGAGAAAAGGCCAAGGGCCCTGAGGTC CCACAGCGTGCACGGTCGCTGTCTGTTGATACCACAGTCTCAAGTCTCTCGTCACTTTCGAATTCTGCTTACTCG GTCCGATTCAATGATTGGTCTGGCGGCCATGAAGCACGCCAAATGCCGAATTCTATTGAACCCCCCGAGAACAGC GACGACTGCCACCAATGTGGAAAAGGTGGCGATTTGCTCTGCTGCGACACATGCATCAACTCATACCATTTCGAA TGCTTGGATCCTCCCTTGGATCCCAAGAATCCTCCGCAGGGAGAGTGGCATTGCCCCAAGTGCTCCATTCGCAAC AGCTTCTCGACCTTGATTGCACACTCCAAACACTACAAGAAGACAGAGTTCCAACCTCCTCAGGATATCAAGGAG CATTTCCATGGAGTGGATGAAGGAATTGTGTTTGATGGCGACTATGCCCGGAATTTAAAGCATCAACGCTACTAC AAGGCCGCGCCCCACCTGCCGCGGCTGACTAAAGCACCGAAGCAAGACGGCCCTACCATTTACGCGAATCCCATG CTTCTCCGAGAATACGACAACAAGGGAGACTGCATCCGTTGCTCCAAGTGTGGTTTTACATCCCAAGGTATACAT CCCATTATTACTTGCGACTACTGTCCTTGCCGCTTCCATCTGGATTGTCTTGATCCTCCCCGCGCACATCCCCCT AACCCCAAGGTCGGGTGGATGTGTCCTAACCATGTCACTCCTGACGATATGATTGCCACCAAGGAGATTAATGGC AGCAACGAGCGTACGCGCCGTGTTCGCCGAACCAAGAACATGGCGTACATTGATTGTGACATCATGCTTCCTGAC GACCCAAATCAGAGTTTGTTTGATGAAGACTGGAGAGACAAAAGGGCCCGTTTCCTCGGAGGCGATGTCGTTTTG AACTTCATCACTGCTGTCAAGGAAGATCATCACGAACGTGAAAAGGAGTATGCACGAATTGTCGAGCGAAAGTGC TTGGAGTTGACCAAGCAACTCACCAGCGATTACCTCAACCGCGCTGAAAACGCTGGGATCACCAACAACATCGCA CAGAACGGTCTTCCCGCGGAGTTCACCCAGAATGTTTCTCACGCTGTTAACAACATGATAGCTGGCGCTCCTGTT TCCACTGAAGAATTCGACGCTGCCACTACTCTCCTCAGCATGGCTACAAGCCAGCCTCCTGCTGTCGGCGAAGGT CACATCGCCGAAGCTGCCGGGCCTACCTCGCCCGTTGCTCAGAAGCCTCTGTCTCGCATTGACGAGGAGTCTACC TTGGGCTCTTCTCATGCTCCCACCTCTCCTCCCCTCGGCACCTCTCACCCTCCCAACGCATCTTCGGATGCCGAG TCCCACCATTCGGACTCCGAGCTTCTCCCCCGGATCCCTGTGTTCAATCGGAACAAGCGATCTCGCGCTGATGAC CATGGATCAGCCGGAGAGCGGGCGCAAAAGCGCCAATACACCAAGTCCAAGTGA |
Gene | >Pro_DTO377G3_2|g603.t1 ATGAGCTGGTCACTGGTCACTTCTGAGATGAGGGAGAACGAGATGTTGTATCTTTCAGGTGAAACTGAGGGATTA CCCCACATTTTTTTAAACTCACCTCTAGATGAGAGCAAAAACTAACTTATTCAAATAGGCGAAGCCGACAAGGCA TCGAAGGAAAAGAAAGATGCTGTTGCTGCCCAGTACGTTGACCCCAGGAAGTTAGGGCATGGAGCGCGTGGCACT AACCCTACCAGGCCCCTTCCGCCTGCCCCTACGGGGTCCACTCAGTCCGAACGCCGTCAGAGCTCTTCCAAACCC GCGCAACGACGGAAGCTTCAGAAGAAGCCCCCGGGCACTTCGAAGCCCACCACCCAGTATCGGACAATGAAACCG ATTGGGGAATACCCATCGCCCGTGGAGTACCGAGCTGCTGGCGTGGCTCCTCCGTCTGAACGGGCCCACAGCGTC GCGACCGTGCCGACCAACGTCCCGCGCGACGAAGCTGAGCGCCTTTCCCCCGTTAGCGGGGTTGAGAGCCCGCCG ACTGACAAGGGTCATGTTGAAATCGCCGAAGAAGCGGCACTTGCCTCAACCTCGACTGGGGCCGAGACCGTGGCC GATGAGTCTATTCGCAGCACCACCCCAGCCGATGCGGCCACTCCTACCCTCCCGAGCGCGGACATCACCCACAAG TACCTCGCCGTGCTGATGTCTCTTCCTTTGCGCCTCTCCGACAAATATGATCTTGTCAAACTACGGGGCGTCATG AAGTTCGCCATAATCAGCTCAATCGAGAACGACAACGAGTGGTGTGTCGTTGGCCTTCTTTACTTCTGGTCCAAT GCCATGGATGATGAATTCAAACTCTCTTTGATTGCCAACCTCTCCGAAAATGACGGAGGAGACAAACAGTTGCAA CTTGCTCTCCAAACGATCCTTAACAATTCTCTGATAGAAGCCCAAAGGTGGTATCAGAAATACGTTCGCTCTACG GCCAATGCAGCCGATATTCCTTCCTGCAGCGAATCAAGTCAGCCAGCTGTCAATTCTGTTGGTGCAGAGCCTAGC TTCAAGGTCTCCGACATCTATCGCGACACAAGTGGTCCTCGGGTTGAAGAAAACTTCCTGAGCGGCAAATCAAAT ACCGCTCCGCTCAAGAGGCCCAAGAAGCCATGCCGCGTCAACGAGAATGCCTACAAGCGTAAGCGCCAGTGGGAA ATGGATCCTGATCATGAGGAAAAGATGCGTGCTGTGCGTGCTCGTCTCGAAGCAGAGTCTTACTCGGAGGCGGTT GTCCAGTACAGTGCAATCCGAACTCAGATCGGTCCACCAGATGCAATCCAGCATCCCTACGACATGGAGAACATT GATGCGGGTATCGATGGGGACATCGACGCGTTCAATCGTGCGCGTTCTCTCCCTGTTCCGGGTTCAATCCTCGAT ATACCTCTTGTAAAGGGTCCGGAGCCCACGGCTCCCTCTGTCTATTCAGATGGTGCTTCGGCTATCGCTCGCAAG ACTGGGAAGCCCGTCTCGCGACGTCAGAGAGAAAAGGCCAAGGGCCCTGAGGTCCCACAGCGTGCACGGTCGCTG TCTGTTGATACCACAGTCTCAAGTCTCTCGTCACTTTCGAATTCTGCTTACTCGGTCCGATTCAATGATTGGTCT GGCGGCCATGAAGCACGCCAAATGCCGAATTCTATGTATGTGATTTCTTGGTGTGGCTCGGCTAGTTCTATGCTA ATATGACACCTTACAGTGAACCCCCCGAGAACAGCGACGACTGCCACCAATGTGGAAAAGGTGGCGATTTGCTCT GCTGCGACACATGCATCAACTCATACCATTTCGAATGCTTGGATCCTCCCTTGGATCCCAAGAATCCTCCGCAGG GAGAGTGGCATTGCCCCAAGTGCTCCATTCGCAACAGCTTCTCGACCTTGATTGCACACTCCAAACACTACAAGA AGACAGAGTTCCAACCTCCTCAGGATATCAAGGAGCATTTCCATGGAGTGGATGAAGGAATTGTGTTTGATGGCG ACTATGCCCGGAATTTAAAGCATCAACGCTACTACAAGGCCGCGCCCCACCTGCCGCGGCTGACTAAAGCACCGA AGCAAGACGGCCCTACCATTTACGCGAATCCCATGCTTCTCCGAGAATACGACAACAAGGGAGACTGCATCCGTT GCTCCAAGTGTGGTTTTACATCCCAAGGTATACATCCCATTATTACTTGCGACTACTGTCCTTGCCGCTTCCATC TGGATTGTCTTGATCCTCCCCGCGCACATCCCCCTAACCCCAAGGTCGGGTGGATGTGTCCTAACCATGTCACTC CTGACGATATGATTGCCACCAAGGAGATTAATGGCAGCAACGAGCGTACGCGCCGTGTTCGCCGAACCAAGAACA TGGCGTACATTGATTGTGACATCATGCTTCCTGACGACCCAAATCAGAGTTTGTTTGATGAAGACTGGAGAGACA AAAGGGCCCGTTTCCTCGGAGGCGATGTCGTTTTGAACTTCATCACTGCTGTCAAGGAAGATCATCACGAACGTG AAAAGGAGTATGCACGAATTGTCGAGCGAAAGTGCTTGGAGTTGACCAAGCAACTCACCAGCGATTACCTCAACC GCGCTGAAAACGCTGGGATCACCAACAACATCGCACAGAACGGTCTTCCCGCGGAGTTCACCCAGAATGTTTCTC ACGCTGTTAACAACATGATAGCTGGCGCTCCTGTTTCCACTGAAGAATTCGACGCTGCCACTACTCTCCTCAGCA TGGCTACAAGCCAGCCTCCTGCTGTCGGCGAAGGTCACATCGCCGAAGCTGCCGGGCCTACCTCGCCCGTTGCTC AGAAGCCTCTGTCTCGCATTGACGAGGAGTCTACCTTGGGCTCTTCTCATGCTCCCACCTCTCCTCCCCTCGGCA CCTCTCACCCTCCCAACGCATCTTCGGATGCCGAGTCCCACCATTCGGACTCCGAGCTTCTCCCCCGGATCCCTG TGTTCAATCGGAACAAGCGATCTCGCGCTGATGACCATGGATCAGCCGGAGAGCGGGCGCAAAAGCGCCAATACA CCAAGTCCAAGTGA |