Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6026.t1
Gene name
Locationscaffold_15:425114..425594
Strand-
Gene length (bp)480
Transcript length (bp)480
Coding sequence length (bp)480
Protein length (aa) 160

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13637 Ank_4 Ankyrin repeats (many copies) 3.5E-11 12 64
PF13637 Ank_4 Ankyrin repeats (many copies) 2.8E-10 45 97
PF13637 Ank_4 Ankyrin repeats (many copies) 4.4E-11 80 130
PF12796 Ank_2 Ankyrin repeats (3 copies) 2.4E-11 12 73
PF12796 Ank_2 Ankyrin repeats (3 copies) 3.6E-11 76 131
PF13606 Ank_3 Ankyrin repeat 8.3E-04 15 38
PF13606 Ank_3 Ankyrin repeat 2.7E-03 44 68
PF13606 Ank_3 Ankyrin repeat 3.9E-04 111 133
PF00023 Ank Ankyrin repeat 5.2E-03 44 67
PF00023 Ank Ankyrin repeat 5.9E-03 111 130

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6026.t1
MSNKGETNETTHESLHEAAKSGDLEAVKILLDNGADIHVVDSLGSSPLHAAAEQGHWDIARLLLEKSMSPWARDA
NDALPIHNAAKGGHLETARLLLECDRATGSSFNKRGETPLHFAAKSGNTELVQLLSFNPRQNPPPLAKRSPRSLQ
TSHTIRRRP*
Coding >Pro_DTO377G3_2|g6026.t1
ATGTCCAACAAAGGAGAAACAAATGAAACCACCCATGAGTCACTCCATGAAGCCGCAAAAAGCGGCGATCTCGAA
GCTGTCAAAATACTTCTCGACAACGGAGCAGACATCCACGTGGTAGACTCACTAGGCTCCTCACCTCTTCATGCT
GCAGCAGAACAAGGCCACTGGGACATCGCCCGACTCCTCCTAGAAAAGAGCATGTCACCATGGGCCCGAGATGCC
AACGATGCACTCCCTATCCACAACGCCGCAAAAGGCGGCCATCTAGAGACAGCCCGACTGCTCCTCGAATGCGAC
CGAGCGACAGGAAGTTCTTTCAACAAACGAGGCGAGACACCGTTACACTTTGCTGCTAAAAGTGGAAACACAGAA
CTAGTTCAGCTCCTAAGCTTCAACCCTCGACAAAATCCTCCGCCCTTGGCGAAACGGTCACCACGAAGTCTGCAA
ACTTCTCATACAATACGACGACGCCCATAA
Transcript >Pro_DTO377G3_2|g6026.t1
ATGTCCAACAAAGGAGAAACAAATGAAACCACCCATGAGTCACTCCATGAAGCCGCAAAAAGCGGCGATCTCGAA
GCTGTCAAAATACTTCTCGACAACGGAGCAGACATCCACGTGGTAGACTCACTAGGCTCCTCACCTCTTCATGCT
GCAGCAGAACAAGGCCACTGGGACATCGCCCGACTCCTCCTAGAAAAGAGCATGTCACCATGGGCCCGAGATGCC
AACGATGCACTCCCTATCCACAACGCCGCAAAAGGCGGCCATCTAGAGACAGCCCGACTGCTCCTCGAATGCGAC
CGAGCGACAGGAAGTTCTTTCAACAAACGAGGCGAGACACCGTTACACTTTGCTGCTAAAAGTGGAAACACAGAA
CTAGTTCAGCTCCTAAGCTTCAACCCTCGACAAAATCCTCCGCCCTTGGCGAAACGGTCACCACGAAGTCTGCAA
ACTTCTCATACAATACGACGACGCCCATAA
Gene >Pro_DTO377G3_2|g6026.t1
ATGTCCAACAAAGGAGAAACAAATGAAACCACCCATGAGTCACTCCATGAAGCCGCAAAAAGCGGCGATCTCGAA
GCTGTCAAAATACTTCTCGACAACGGAGCAGACATCCACGTGGTAGACTCACTAGGCTCCTCACCTCTTCATGCT
GCAGCAGAACAAGGCCACTGGGACATCGCCCGACTCCTCCTAGAAAAGAGCATGTCACCATGGGCCCGAGATGCC
AACGATGCACTCCCTATCCACAACGCCGCAAAAGGCGGCCATCTAGAGACAGCCCGACTGCTCCTCGAATGCGAC
CGAGCGACAGGAAGTTCTTTCAACAAACGAGGCGAGACACCGTTACACTTTGCTGCTAAAAGTGGAAACACAGAA
CTAGTTCAGCTCCTAAGCTTCAACCCTCGACAAAATCCTCCGCCCTTGGCGAAACGGTCACCACGAAGTCTGCAA
ACTTCTCATACAATACGACGACGCCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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