Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6010.t1
Gene name
Locationscaffold_15:396184..396859
Strand-
Gene length (bp)675
Transcript length (bp)549
Coding sequence length (bp)549
Protein length (aa) 183

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

Domain # Start End Length
1 106 125 19
2 130 149 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6010.t1
MTTVNGSNDKNLHDINTFAESSSDEHALNTSFESEPRSSGSYPCQYEMNRPAEASTNSISDDIFHKVKSFLRHKT
QIPNDDTLSGWPHHGRPCNSFSIFKQQTKQILRPRIVFSGAFAASAIILSNTKSPALVIFIWNLLAIVPLSITLT
EATERISKDLGETAGALLNITIGNLAELIIFV*
Coding >Pro_DTO377G3_2|g6010.t1
ATGACCACAGTGAATGGTTCCAACGATAAGAACCTTCATGACATCAATACCTTCGCTGAAAGCTCAAGTGACGAG
CACGCCCTGAATACTTCCTTCGAATCTGAGCCCCGGTCTAGTGGCTCCTATCCTTGTCAATATGAAATGAACAGA
CCAGCCGAGGCCTCCACGAATTCAATCTCCGACGACATCTTCCATAAAGTAAAAAGCTTTCTTCGACACAAAACA
CAGATCCCCAATGACGACACGTTGTCTGGGTGGCCCCATCATGGCAGACCCTGCAATTCCTTCTCCATATTCAAA
CAACAGACAAAACAGATTCTCAGGCCGAGGATCGTCTTCTCCGGTGCCTTCGCCGCATCGGCAATCATTCTCTCT
AATACCAAAAGCCCGGCGCTTGTGATATTCATATGGAACCTCCTTGCGATTGTGCCGCTGTCGATCACACTCACA
GAAGCCACCGAGAGGATATCCAAGGATTTGGGTGAGACCGCTGGCGCTCTCCTCAACATCACGATAGGGAATCTA
GCGGAGCTTATTATTTTTGTGTAA
Transcript >Pro_DTO377G3_2|g6010.t1
ATGACCACAGTGAATGGTTCCAACGATAAGAACCTTCATGACATCAATACCTTCGCTGAAAGCTCAAGTGACGAG
CACGCCCTGAATACTTCCTTCGAATCTGAGCCCCGGTCTAGTGGCTCCTATCCTTGTCAATATGAAATGAACAGA
CCAGCCGAGGCCTCCACGAATTCAATCTCCGACGACATCTTCCATAAAGTAAAAAGCTTTCTTCGACACAAAACA
CAGATCCCCAATGACGACACGTTGTCTGGGTGGCCCCATCATGGCAGACCCTGCAATTCCTTCTCCATATTCAAA
CAACAGACAAAACAGATTCTCAGGCCGAGGATCGTCTTCTCCGGTGCCTTCGCCGCATCGGCAATCATTCTCTCT
AATACCAAAAGCCCGGCGCTTGTGATATTCATATGGAACCTCCTTGCGATTGTGCCGCTGTCGATCACACTCACA
GAAGCCACCGAGAGGATATCCAAGGATTTGGGTGAGACCGCTGGCGCTCTCCTCAACATCACGATAGGGAATCTA
GCGGAGCTTATTATTTTTGTGTAA
Gene >Pro_DTO377G3_2|g6010.t1
ATGACCACAGTGAATGGTTCCAACGATAAGAACCTTCATGACATCAATACCTTCGCTGAAAGCTCAAGTGACGAG
CACGCCCTGAATACTTCCTTCGAATCTGAGCCCCGGTCTAGTGGCTCCTATCCTTGTCAATATGAAATGAACAGT
GAGTCCGCACTATCCTCCAATTGCCGGCGTCGTCCAAGCTGACATGGACTTCTTATCGTTATCAAGGACCAGCCG
AGGCCTCCACGAATTCAATCTCCGACGACATCTTCCATAAAGTAAAAAGCTTTCTTCGACACAAAACACAGATCC
CCAATGACGACACGTTGTCTGGGTGGCCCCATCATGGCAGACCCTGCAATTCCTTCTCCATATTCAAACAACAGA
CAAAACAGATTCTCAGGCCGAGGATCGTCTTCTCCGGTGCCTTCGCCGCATCGGCAATCATTCTCTCTAATACCA
AAAGCCCGGCGCTTGTGATATTCATATGGAACCTCCTTGCGATTGTGCCGCTGTCGATCACACTCACAGAAGCCA
CCGAGAGGATATCCAAGGATTTGGGTGAGACCGCTGGCGCTCTCCTCAACATCACGATAGGGAATCTAGCGGAGC
TTATTATTTTGTGAGTCTCAATGTGGAACTCACTTATTTTCAAACTATATATACTGACTATCATATAGTGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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