Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g6.t1
Gene name
Location	scaffold_01:17901..19045
Strand	+
Gene length (bp)	1144
Transcript length (bp)	564
Coding sequence length (bp)	564
Protein length (aa)	188

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00240	ubiquitin	Ubiquitin family	5.9E-33	36	107
PF01599	Ribosomal_S27	Ribosomal protein S27a	8.5E-25	135	180
PF11976	Rad60-SLD	Ubiquitin-2 like Rad60 SUMO-like	6.1E-16	34	104
PF14560	Ubiquitin_2	Ubiquitin-like domain	1.6E-04	32	102

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005840	ribosome	Yes
GO:0003735	structural constituent of ribosome	Yes
GO:0006412	translation	Yes
GO:0034645	cellular macromolecule biosynthetic process	No
GO:0005488	binding	No
GO:0008152	metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0005575	cellular_component	No
GO:0071704	organic substance metabolic process	No
GO:0005198	structural molecule activity	No
GO:0043228	non-membrane-bounded organelle	No
GO:0008150	biological_process	No
GO:1901566	organonitrogen compound biosynthetic process	No
GO:0019538	protein metabolic process	No
GO:0043603	cellular amide metabolic process	No
GO:0006518	peptide metabolic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0043170	macromolecule metabolic process	No
GO:0043604	amide biosynthetic process	No
GO:1901576	organic substance biosynthetic process	No
GO:0009059	macromolecule biosynthetic process	No
GO:0009987	cellular process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0043226	organelle	No
GO:0110165	cellular anatomical entity	No
GO:0043043	peptide biosynthetic process	No
GO:0043232	intracellular non-membrane-bounded organelle	No
GO:0044249	cellular biosynthetic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0003674	molecular_function	No
GO:0043229	intracellular organelle	No
GO:0009058	biosynthetic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0044238	primary metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 68	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g6.t1 MRINVPRIRKIDTSSTLAPYIVEEDTTVEAFIKMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQR LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKTKLAILKYYKVDGDGKIERL RRECPAPECGAGVFMAAMHNRQYCGKCHLTYVFDEAK*
Coding	>Pro_DTO377G3_2\|g6.t1 ATGCGTATAAACGTACCTAGAATCCGTAAGATTGACACCTCCTCGACCTTGGCTCCATATATAGTTGAGGAAGAC ACCACTGTCGAGGCCTTCATCAAGATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTG GAGTCATCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAACAACGT TTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTT CACCTCGTGCTCCGCCTGCGTGGTGGTGGTAAGAAGCGCAAGAAGAAGGTCTACACCACCCCCAAGAAGATCAAG CACAAGCACAAGAAGACCAAGCTCGCCATCCTCAAGTACTACAAGGTTGACGGTGATGGAAAGATTGAGCGTCTT CGCCGCGAGTGCCCCGCTCCCGAGTGTGGTGCCGGTGTCTTCATGGCCGCTATGCACAACCGCCAGTACTGTGGT AAGTGCCACCTCACCTACGTCTTCGACGAGGCCAAATAA
Transcript	>Pro_DTO377G3_2\|g6.t1 ATGCGTATAAACGTACCTAGAATCCGTAAGATTGACACCTCCTCGACCTTGGCTCCATATATAGTTGAGGAAGAC ACCACTGTCGAGGCCTTCATCAAGATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTG GAGTCATCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAACAACGT TTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTT CACCTCGTGCTCCGCCTGCGTGGTGGTGGTAAGAAGCGCAAGAAGAAGGTCTACACCACCCCCAAGAAGATCAAG CACAAGCACAAGAAGACCAAGCTCGCCATCCTCAAGTACTACAAGGTTGACGGTGATGGAAAGATTGAGCGTCTT CGCCGCGAGTGCCCCGCTCCCGAGTGTGGTGCCGGTGTCTTCATGGCCGCTATGCACAACCGCCAGTACTGTGGT AAGTGCCACCTCACCTACGTCTTCGACGAGGCCAAATAA
Gene	>Pro_DTO377G3_2\|g6.t1 ATGCGTATAAACGTACCTAGAATCCGTAAGATTGACACCTCCTCGGTTCGTTTCCAAGGAGATTCGATATAAACA AGGTGATCTCGTACTATATAGACCTTGGCTCCATATATAGTACCCATAGCCCGATGGGCCGATACGGTGCCATGG CGTCATCCATGGAAATGATATTCGACCTGTCCAACACGGGATAATTATTAACGTAGCGGGCCTCAGGCAGAAATA ATATTCGAGTCACGTGCTTTTTCTCGGTCAGCATTTCATTTCACGCTAGACTACTTTCGGTGCACGACCCACCCC ACGTGATCGCACAACGATTTTAATCACCAACCGGCTTCCGCGCACAACGATCTTCTTTAATCTTGCAAGGTTGAG GAAGACACCACTGTCGAGGTGAGTATTTGGTTTTAGGCCAGCGGATACGAATGTGATGACCATGCGCCATTAGCA TGTAGTCCATTCTCTCTCTGACTTCTACATTTTCGTCGTCGCGAGCATCGCACTGACTTTTTTTTTTTCGCAGGC CTTCATCAAGATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCATCCGACAC CATTGACAATGTCAAGTCCAAGATCCAGGGTAAGCATCGAAATCCGCGCGCAACGATCGCACACACCACAACCCG AGGCTCTAGACTAACCCCGCACCAGACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAG CAGCTCGAGGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTCCGCCTG CGTGGTGGTGGTAAGAAGCGCAAGAAGAAGGTCTACACCACCCCCAAGAAGATCAAGCACAAGCACAAGAAGACC AAGCTCGCCATCCTCAAGTACTACAAGGTTGACGGTGATGGAAAGATTGAGCGTCTTCGCCGCGAGTGCCCCGCT CCCGAGGTATGTGATAGCTCTGTCGCAAAACGATTATCCTTATATTCTGATTCGGAAACTAATTTGTCCTTTCTT ATAGTGTGGTGCCGGTGTCTTCATGGCCGCTATGCACAACCGCCAGTACTGTGGTAAGTGCCACCTCACCTACGT CTTCGACGAGGCCAAATAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences