Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5976.t1
Gene name
Locationscaffold_15:295991..296591
Strand-
Gene length (bp)600
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00125 Histone Core histone H2A/H2B/H3/H4 2.1E-49 1 132

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5976.t1
MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREI
AQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS*
Coding >Pro_DTO377G3_2|g5976.t1
ATGGCTCGTACCAAGCAGACTGCCCGTAAGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCTTCCAAGGCC
GCTCGCAAGGCCGCTCCTTCTACCGGAGGTGTCAAGAAGCCCCACCGTTACAAGCCCGGTACCGTCGCTCTCCGT
GAGATCCGTCGCTACCAGAAGTCCACTGAGCTCCTGATCCGCAAGCTCCCCTTCCAGCGTCTGGTCCGTGAGATC
GCCCAGGATTTCAAGTCCGATCTCCGCTTCCAGTCCTCTGCCATCGGTGCTCTCCAGGAGTCCGTTGAGGCTTAC
CTCGTCTCTCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATC
CAGTTGGCCCGCCGTCTCCGTGGCGAGCGCTCGTAA
Transcript >Pro_DTO377G3_2|g5976.t1
ATGGCTCGTACCAAGCAGACTGCCCGTAAGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCTTCCAAGGCC
GCTCGCAAGGCCGCTCCTTCTACCGGAGGTGTCAAGAAGCCCCACCGTTACAAGCCCGGTACCGTCGCTCTCCGT
GAGATCCGTCGCTACCAGAAGTCCACTGAGCTCCTGATCCGCAAGCTCCCCTTCCAGCGTCTGGTCCGTGAGATC
GCCCAGGATTTCAAGTCCGATCTCCGCTTCCAGTCCTCTGCCATCGGTGCTCTCCAGGAGTCCGTTGAGGCTTAC
CTCGTCTCTCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATC
CAGTTGGCCCGCCGTCTCCGTGGCGAGCGCTCGTAA
Gene >Pro_DTO377G3_2|g5976.t1
ATGGCTCGTACCAAGCAGACTGCCCGTAAGTATTACCTCTATCATATTTTATTCATCTCACTGCAGATACCTGAT
TAGTCGGGTGTCCGCCTTGAGGATGGGCGACGCGTTCACGCGTTGGACATGAGACATTTTACTGACTGTCGCAAA
TAGGTAAGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCTTCCAAGGCCGCTCGCAAGGCCGCTCCTTCTA
CCGGAGGTGTCAAGAAGCCCCACCGTTACAAGCCCGGTAAGTCATATCTGCTGTCGCCGACGAATCCACTTGAAA
CATTTCTAACGTTCATCTCCAGGTACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCCACTGAGCTCCTG
ATCCGCAAGCTCCCCTTCCAGCGTCTGGTCCGTGAGATCGCCCAGGATTTCAAGTCCGATCTCCGCTTCCAGTCC
TCTGCCATCGGTGCTCTCCAGGAGTCCGTTGAGGCTTACCTCGTCTCTCTCTTCGAGGACACCAACCTGTGCGCC
ATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAGTTGGCCCGCCGTCTCCGTGGCGAGCGCTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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