Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5975.t1
Gene name
Locationscaffold_15:291383..292424
Strand+
Gene length (bp)1041
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13637 Ank_4 Ankyrin repeats (many copies) 2.4E-09 27 79
PF13637 Ank_4 Ankyrin repeats (many copies) 2.4E-12 94 145
PF13637 Ank_4 Ankyrin repeats (many copies) 4.7E-09 159 198
PF13637 Ank_4 Ankyrin repeats (many copies) 9.8E-07 257 293
PF12796 Ank_2 Ankyrin repeats (3 copies) 1.3E-14 30 122
PF12796 Ank_2 Ankyrin repeats (3 copies) 4.8E-12 124 186
PF12796 Ank_2 Ankyrin repeats (3 copies) 2.4E-12 195 284
PF12796 Ank_2 Ankyrin repeats (3 copies) 1.6E-11 227 321
PF00023 Ank Ankyrin repeat 2.2E-04 60 87
PF00023 Ank Ankyrin repeat 1.1E-05 91 122
PF00023 Ank Ankyrin repeat 1.8E-03 126 154
PF00023 Ank Ankyrin repeat 1.5E-07 157 189
PF00023 Ank Ankyrin repeat 6.4E-08 255 285
PF13606 Ank_3 Ankyrin repeat 4.1E-04 125 152
PF13606 Ank_3 Ankyrin repeat 9.2E-06 157 186
PF13606 Ank_3 Ankyrin repeat 2.8E-03 254 283
PF13857 Ank_5 Ankyrin repeats (many copies) 2.5E-07 242 294

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5975.t1
MADIEPLRTCSCDRNEDGHQAPESQVTSVHQAVVEGNIELLEVLIRDGADISTTISSRDFTALHLAVQGGNEAAT
RLLIHAGANVSAPSYDGVTPLHNAAAGDSVAVAELLVKSGAEINARNIDHETPLHVVALFGNYQIAKLLIDVGSD
ISATECYGNTALHIAAGREHLEIVHSLLEAGADVNAINNNGDPVLHHAGRDDPTCVDLLLSHGADVYMKGEGGDT
FLHRAAESSAELVRVALGADANVEATNDEGKTPLHSAAAYGEKQSIRLLLDAGANVNATTKIGETALHLISGDSS
IDESDEKARLLIDAGADINARTVSGQSALDLAKDSNATVIQVLCER*
Coding >Pro_DTO377G3_2|g5975.t1
ATGGCTGATATTGAGCCTCTTCGTACATGTTCTTGCGACAGAAACGAGGATGGTCATCAAGCGCCCGAGAGTCAA
GTTACATCTGTGCATCAAGCTGTCGTCGAAGGGAATATCGAGCTCCTCGAAGTGCTGATTCGGGATGGAGCCGAC
ATTTCTACTACAATTTCCTCCCGTGATTTCACGGCGCTTCACCTCGCTGTTCAGGGGGGTAATGAGGCGGCCACA
CGACTTCTCATTCACGCCGGAGCGAATGTTTCTGCGCCCAGTTATGACGGCGTGACACCATTGCACAATGCAGCT
GCTGGAGATTCGGTCGCGGTAGCTGAATTACTCGTCAAGTCTGGGGCTGAAATCAACGCACGGAATATCGATCAC
GAAACACCATTGCATGTAGTGGCCTTGTTTGGGAACTACCAAATTGCAAAGCTCCTGATTGATGTTGGATCCGAT
ATCTCAGCAACAGAGTGCTACGGGAACACAGCGCTGCACATTGCTGCCGGCCGTGAGCATCTCGAGATAGTTCAT
TCTCTTCTTGAGGCTGGAGCGGACGTGAATGCTATTAACAACAATGGAGATCCCGTGCTACATCATGCAGGCAGA
GATGATCCAACATGCGTTGATCTGCTTCTCAGCCATGGCGCAGATGTGTATATGAAAGGTGAGGGAGGGGACACT
TTCTTGCATCGGGCAGCTGAAAGCTCCGCGGAACTAGTGCGTGTCGCTCTTGGAGCCGATGCCAACGTCGAGGCA
ACCAACGATGAAGGAAAAACCCCATTGCATTCTGCAGCTGCGTATGGCGAAAAGCAATCAATCCGACTTCTACTC
GATGCGGGTGCGAATGTGAATGCAACCACCAAAATTGGCGAGACCGCATTGCACCTAATTTCTGGCGATTCTTCA
ATAGATGAATCTGATGAGAAAGCAAGGCTACTCATTGATGCTGGTGCCGACATCAACGCGAGGACTGTATCGGGA
CAAAGCGCCCTTGATCTTGCAAAAGACAGCAATGCTACAGTTATACAAGTACTATGCGAAAGATAG
Transcript >Pro_DTO377G3_2|g5975.t1
ATGGCTGATATTGAGCCTCTTCGTACATGTTCTTGCGACAGAAACGAGGATGGTCATCAAGCGCCCGAGAGTCAA
GTTACATCTGTGCATCAAGCTGTCGTCGAAGGGAATATCGAGCTCCTCGAAGTGCTGATTCGGGATGGAGCCGAC
ATTTCTACTACAATTTCCTCCCGTGATTTCACGGCGCTTCACCTCGCTGTTCAGGGGGGTAATGAGGCGGCCACA
CGACTTCTCATTCACGCCGGAGCGAATGTTTCTGCGCCCAGTTATGACGGCGTGACACCATTGCACAATGCAGCT
GCTGGAGATTCGGTCGCGGTAGCTGAATTACTCGTCAAGTCTGGGGCTGAAATCAACGCACGGAATATCGATCAC
GAAACACCATTGCATGTAGTGGCCTTGTTTGGGAACTACCAAATTGCAAAGCTCCTGATTGATGTTGGATCCGAT
ATCTCAGCAACAGAGTGCTACGGGAACACAGCGCTGCACATTGCTGCCGGCCGTGAGCATCTCGAGATAGTTCAT
TCTCTTCTTGAGGCTGGAGCGGACGTGAATGCTATTAACAACAATGGAGATCCCGTGCTACATCATGCAGGCAGA
GATGATCCAACATGCGTTGATCTGCTTCTCAGCCATGGCGCAGATGTGTATATGAAAGGTGAGGGAGGGGACACT
TTCTTGCATCGGGCAGCTGAAAGCTCCGCGGAACTAGTGCGTGTCGCTCTTGGAGCCGATGCCAACGTCGAGGCA
ACCAACGATGAAGGAAAAACCCCATTGCATTCTGCAGCTGCGTATGGCGAAAAGCAATCAATCCGACTTCTACTC
GATGCGGGTGCGAATGTGAATGCAACCACCAAAATTGGCGAGACCGCATTGCACCTAATTTCTGGCGATTCTTCA
ATAGATGAATCTGATGAGAAAGCAAGGCTACTCATTGATGCTGGTGCCGACATCAACGCGAGGACTGTATCGGGA
CAAAGCGCCCTTGATCTTGCAAAAGACAGCAATGCTACAGTTATACAAGTACTATGCGAAAGATAG
Gene >Pro_DTO377G3_2|g5975.t1
ATGGCTGATATTGAGCCTCTTCGTACATGTTCTTGCGACAGAAACGAGGATGGTCATCAAGCGCCCGAGAGTCAA
GTTACATCTGTGCATCAAGCTGTCGTCGAAGGGAATATCGAGCTCCTCGAAGTGCTGATTCGGGATGGAGCCGAC
ATTTCTACTACAATTTCCTCCCGTGATTTCACGGCGCTTCACCTCGCTGTTCAGGGGGGTAATGAGGCGGCCACA
CGACTTCTCATTCACGCCGGAGCGAATGTTTCTGCGCCCAGTTATGACGGCGTGACACCATTGCACAATGCAGCT
GCTGGAGATTCGGTCGCGGTAGCTGAATTACTCGTCAAGTCTGGGGCTGAAATCAACGCACGGAATATCGATCAC
GAAACACCATTGCATGTAGTGGCCTTGTTTGGGAACTACCAAATTGCAAAGCTCCTGATTGATGTTGGATCCGAT
ATCTCAGCAACAGAGTGCTACGGGAACACAGCGCTGCACATTGCTGCCGGCCGTGAGCATCTCGAGATAGTTCAT
TCTCTTCTTGAGGCTGGAGCGGACGTGAATGCTATTAACAACAATGGAGATCCCGTGCTACATCATGCAGGCAGA
GATGATCCAACATGCGTTGATCTGCTTCTCAGCCATGGCGCAGATGTGTATATGAAAGGTGAGGGAGGGGACACT
TTCTTGCATCGGGCAGCTGAAAGCTCCGCGGAACTAGTGCGTGTCGCTCTTGGAGCCGATGCCAACGTCGAGGCA
ACCAACGATGAAGGAAAAACCCCATTGCATTCTGCAGCTGCGTATGGCGAAAAGCAATCAATCCGACTTCTACTC
GATGCGGGTGCGAATGTGAATGCAACCACCAAAATTGGCGAGACCGCATTGCACCTAATTTCTGGCGATTCTTCA
ATAGATGAATCTGATGAGAAAGCAAGGCTACTCATTGATGCTGGTGCCGACATCAACGCGAGGACTGTATCGGGA
CAAAGCGCCCTTGATCTTGCAAAAGACAGCAATGCTACAGTTATACAAGTACTATGCGAAAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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