© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g5975.t1 |
| Gene name | |
| Location | scaffold_15:291383..292424 |
| Strand | + |
| Gene length (bp) | 1041 |
| Transcript length (bp) | 1041 |
| Coding sequence length (bp) | 1041 |
| Protein length (aa) | 347 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 2.6E-09 | 27 | 79 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 2.6E-12 | 94 | 145 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 5.2E-09 | 159 | 198 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.1E-06 | 257 | 293 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.5E-14 | 30 | 122 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 4.5E-12 | 124 | 186 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 2.2E-12 | 195 | 284 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 3.3E-11 | 227 | 321 |
| PF00023 | Ank | Ankyrin repeat | 4.7E-05 | 60 | 87 |
| PF00023 | Ank | Ankyrin repeat | 9.8E-06 | 91 | 122 |
| PF00023 | Ank | Ankyrin repeat | 2.5E-03 | 126 | 154 |
| PF00023 | Ank | Ankyrin repeat | 1.3E-07 | 157 | 189 |
| PF00023 | Ank | Ankyrin repeat | 7.6E-08 | 255 | 285 |
| PF00023 | Ank | Ankyrin repeat | 3.1E-02 | 288 | 322 |
| PF13606 | Ank_3 | Ankyrin repeat | 4.6E-04 | 125 | 152 |
| PF13606 | Ank_3 | Ankyrin repeat | 1.3E-05 | 157 | 186 |
| PF13606 | Ank_3 | Ankyrin repeat | 3.9E-03 | 254 | 283 |
| PF13857 | Ank_5 | Ankyrin repeats (many copies) | 1.8E-07 | 242 | 294 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g5975.t1 MADIEPLRTCSCDRNEDGHQAPESQVTSVHQAVVEGNIELLEVLIRDGADISTTISSRDFTALHLAVQGGNEAAT RLLIHAGANVSAPSYDGVTPLHNAAAGDSVAVAELLVKSGAEINARNIDHETPLHVVALFGNYQIAKLLIDVGSD ISATECYGNTALHIAAGREHLEIVHSLLEAGADVNAINNNGDPVLHHAGRDDPTCVDLLLSHGADVYMKGEGGDT FLHRAAESSAELVRVALGADANVEATNDEGKTPLHSAAAYGEKQSIRLLLDAGANVNATTKIGETALHLISGDSS IDESDEKARLLIDAGADINARTVSGQSALDLAKDSNATVIQVLCER* |
| Coding | >Pro_DTO377G3_2|g5975.t1 ATGGCTGATATTGAGCCTCTTCGTACATGTTCTTGCGACAGAAACGAGGATGGTCATCAAGCGCCCGAGAGTCAA GTTACATCTGTGCATCAAGCTGTCGTCGAAGGGAATATCGAGCTCCTCGAAGTGCTGATTCGGGATGGAGCCGAC ATTTCTACTACAATTTCCTCCCGTGATTTCACGGCGCTTCACCTCGCTGTTCAGGGGGGTAATGAGGCGGCCACA CGACTTCTCATTCACGCCGGAGCGAATGTTTCTGCGCCCAGTTATGACGGCGTGACACCATTGCACAATGCAGCT GCTGGAGATTCGGTCGCGGTAGCTGAATTACTCGTCAAGTCTGGGGCTGAAATCAACGCACGGAATATCGATCAC GAAACACCATTGCATGTAGTGGCCTTGTTTGGGAACTACCAAATTGCAAAGCTCCTGATTGATGTTGGATCCGAT ATCTCAGCAACAGAGTGCTACGGGAACACAGCGCTGCACATTGCTGCCGGCCGTGAGCATCTCGAGATAGTTCAT TCTCTTCTTGAGGCTGGAGCGGACGTGAATGCTATTAACAACAATGGAGATCCCGTGCTACATCATGCAGGCAGA GATGATCCAACATGCGTTGATCTGCTTCTCAGCCATGGCGCAGATGTGTATATGAAAGGTGAGGGAGGGGACACT TTCTTGCATCGGGCAGCTGAAAGCTCCGCGGAACTAGTGCGTGTCGCTCTTGGAGCCGATGCCAACGTCGAGGCA ACCAACGATGAAGGAAAAACCCCATTGCATTCTGCAGCTGCGTATGGCGAAAAGCAATCAATCCGACTTCTACTC GATGCGGGTGCGAATGTGAATGCAACCACCAAAATTGGCGAGACCGCATTGCACCTAATTTCTGGCGATTCTTCA ATAGATGAATCTGATGAGAAAGCAAGGCTACTCATTGATGCTGGTGCCGACATCAACGCGAGGACTGTATCGGGA CAAAGCGCCCTTGATCTTGCAAAAGACAGCAATGCTACAGTTATACAAGTACTATGCGAAAGATAG |
| Transcript | >Pro_DTO377G3_2|g5975.t1 ATGGCTGATATTGAGCCTCTTCGTACATGTTCTTGCGACAGAAACGAGGATGGTCATCAAGCGCCCGAGAGTCAA GTTACATCTGTGCATCAAGCTGTCGTCGAAGGGAATATCGAGCTCCTCGAAGTGCTGATTCGGGATGGAGCCGAC ATTTCTACTACAATTTCCTCCCGTGATTTCACGGCGCTTCACCTCGCTGTTCAGGGGGGTAATGAGGCGGCCACA CGACTTCTCATTCACGCCGGAGCGAATGTTTCTGCGCCCAGTTATGACGGCGTGACACCATTGCACAATGCAGCT GCTGGAGATTCGGTCGCGGTAGCTGAATTACTCGTCAAGTCTGGGGCTGAAATCAACGCACGGAATATCGATCAC GAAACACCATTGCATGTAGTGGCCTTGTTTGGGAACTACCAAATTGCAAAGCTCCTGATTGATGTTGGATCCGAT ATCTCAGCAACAGAGTGCTACGGGAACACAGCGCTGCACATTGCTGCCGGCCGTGAGCATCTCGAGATAGTTCAT TCTCTTCTTGAGGCTGGAGCGGACGTGAATGCTATTAACAACAATGGAGATCCCGTGCTACATCATGCAGGCAGA GATGATCCAACATGCGTTGATCTGCTTCTCAGCCATGGCGCAGATGTGTATATGAAAGGTGAGGGAGGGGACACT TTCTTGCATCGGGCAGCTGAAAGCTCCGCGGAACTAGTGCGTGTCGCTCTTGGAGCCGATGCCAACGTCGAGGCA ACCAACGATGAAGGAAAAACCCCATTGCATTCTGCAGCTGCGTATGGCGAAAAGCAATCAATCCGACTTCTACTC GATGCGGGTGCGAATGTGAATGCAACCACCAAAATTGGCGAGACCGCATTGCACCTAATTTCTGGCGATTCTTCA ATAGATGAATCTGATGAGAAAGCAAGGCTACTCATTGATGCTGGTGCCGACATCAACGCGAGGACTGTATCGGGA CAAAGCGCCCTTGATCTTGCAAAAGACAGCAATGCTACAGTTATACAAGTACTATGCGAAAGATAG |
| Gene | >Pro_DTO377G3_2|g5975.t1 ATGGCTGATATTGAGCCTCTTCGTACATGTTCTTGCGACAGAAACGAGGATGGTCATCAAGCGCCCGAGAGTCAA GTTACATCTGTGCATCAAGCTGTCGTCGAAGGGAATATCGAGCTCCTCGAAGTGCTGATTCGGGATGGAGCCGAC ATTTCTACTACAATTTCCTCCCGTGATTTCACGGCGCTTCACCTCGCTGTTCAGGGGGGTAATGAGGCGGCCACA CGACTTCTCATTCACGCCGGAGCGAATGTTTCTGCGCCCAGTTATGACGGCGTGACACCATTGCACAATGCAGCT GCTGGAGATTCGGTCGCGGTAGCTGAATTACTCGTCAAGTCTGGGGCTGAAATCAACGCACGGAATATCGATCAC GAAACACCATTGCATGTAGTGGCCTTGTTTGGGAACTACCAAATTGCAAAGCTCCTGATTGATGTTGGATCCGAT ATCTCAGCAACAGAGTGCTACGGGAACACAGCGCTGCACATTGCTGCCGGCCGTGAGCATCTCGAGATAGTTCAT TCTCTTCTTGAGGCTGGAGCGGACGTGAATGCTATTAACAACAATGGAGATCCCGTGCTACATCATGCAGGCAGA GATGATCCAACATGCGTTGATCTGCTTCTCAGCCATGGCGCAGATGTGTATATGAAAGGTGAGGGAGGGGACACT TTCTTGCATCGGGCAGCTGAAAGCTCCGCGGAACTAGTGCGTGTCGCTCTTGGAGCCGATGCCAACGTCGAGGCA ACCAACGATGAAGGAAAAACCCCATTGCATTCTGCAGCTGCGTATGGCGAAAAGCAATCAATCCGACTTCTACTC GATGCGGGTGCGAATGTGAATGCAACCACCAAAATTGGCGAGACCGCATTGCACCTAATTTCTGGCGATTCTTCA ATAGATGAATCTGATGAGAAAGCAAGGCTACTCATTGATGCTGGTGCCGACATCAACGCGAGGACTGTATCGGGA CAAAGCGCCCTTGATCTTGCAAAAGACAGCAATGCTACAGTTATACAAGTACTATGCGAAAGATAG |