Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5943.t1
Gene name
Locationscaffold_15:204501..205273
Strand+
Gene length (bp)772
Transcript length (bp)639
Coding sequence length (bp)639
Protein length (aa) 213

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16242 Pyrid_ox_like Pyridoxamine 5'-phosphate oxidase like 1.5E-16 33 162
PF01243 Putative_PNPOx Pyridoxamine 5'-phosphate oxidase 1.5E-07 35 123

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5943.t1
MSTTGATINTTTGNHPVDPYKTQSLEDPPLPQKIEELVKFISDVKFGMLTTKQSEGDYLASRCMALAATEHGGVD
LIFHTNLFSGKTMDLTVHPKETNMSFLDPISGAWASISGTASVIGDPEIVKKHYSPGLRAWIGDMGDGVHDGGPS
DPRIGVIKLEAKLVTHVVPHRGLLGRAYENIKGAVEGTVPNVNGIREMSLEELAEWRVTHQE*
Coding >Pro_DTO377G3_2|g5943.t1
ATGTCTACTACAGGTGCCACCATCAACACCACGACGGGTAACCACCCCGTGGACCCCTACAAGACCCAGAGCTTA
GAAGACCCGCCTCTCCCTCAGAAGATCGAAGAGCTGGTTAAATTTATCTCCGATGTTAAATTTGGCATGTTGACA
ACCAAGCAGTCAGAGGGTGACTATTTGGCTTCACGATGTATGGCACTAGCCGCAACGGAGCACGGCGGCGTTGAC
CTCATTTTCCACACAAACCTCTTCTCCGGCAAGACAATGGATCTTACTGTACACCCAAAAGAGACAAATATGTCC
TTCCTCGACCCTATCAGCGGAGCCTGGGCCTCCATCTCCGGTACTGCATCAGTGATCGGTGATCCCGAAATCGTG
AAGAAGCACTACTCGCCCGGACTCAGAGCATGGATTGGCGATATGGGCGATGGTGTGCACGATGGCGGACCCTCA
GATCCCCGGATTGGCGTCATTAAGCTCGAGGCTAAGTTAGTCACGCATGTTGTTCCCCACAGGGGCCTGCTTGGG
CGTGCCTATGAAAATATTAAGGGTGCCGTGGAGGGTACCGTTCCTAATGTCAACGGCATTCGAGAGATGAGTTTG
GAGGAATTGGCCGAGTGGCGCGTGACGCATCAGGAATAA
Transcript >Pro_DTO377G3_2|g5943.t1
ATGTCTACTACAGGTGCCACCATCAACACCACGACGGGTAACCACCCCGTGGACCCCTACAAGACCCAGAGCTTA
GAAGACCCGCCTCTCCCTCAGAAGATCGAAGAGCTGGTTAAATTTATCTCCGATGTTAAATTTGGCATGTTGACA
ACCAAGCAGTCAGAGGGTGACTATTTGGCTTCACGATGTATGGCACTAGCCGCAACGGAGCACGGCGGCGTTGAC
CTCATTTTCCACACAAACCTCTTCTCCGGCAAGACAATGGATCTTACTGTACACCCAAAAGAGACAAATATGTCC
TTCCTCGACCCTATCAGCGGAGCCTGGGCCTCCATCTCCGGTACTGCATCAGTGATCGGTGATCCCGAAATCGTG
AAGAAGCACTACTCGCCCGGACTCAGAGCATGGATTGGCGATATGGGCGATGGTGTGCACGATGGCGGACCCTCA
GATCCCCGGATTGGCGTCATTAAGCTCGAGGCTAAGTTAGTCACGCATGTTGTTCCCCACAGGGGCCTGCTTGGG
CGTGCCTATGAAAATATTAAGGGTGCCGTGGAGGGTACCGTTCCTAATGTCAACGGCATTCGAGAGATGAGTTTG
GAGGAATTGGCCGAGTGGCGCGTGACGCATCAGGAATAA
Gene >Pro_DTO377G3_2|g5943.t1
ATGTCTACTACAGGTGCCACCATCAACACCACGACGGGTAACCACCCCGTGGACCCCTACAAGACCCAGAGCTTA
GAAGACCCGCCTCTCCCTCAGAAGATCGAAGAGCTGGTTAAATTTATCTCCGATGTTAAATTTGGCATGTTGACA
ACCAAGCAGTCAGAGGGTGACTATTTGGCTTCACGATGTATGGCACTAGCCGCAACGGTATGAGCAGAGCCACAG
ATAACCACAATTCAAGGGCAATCATGCTAATCCATTACCCAAAATAGGAGCACGGCGGCGTTGACCTCATTTTCC
ACACAAACCTCTTCTCCGGCAAGACAATGGATCTTACTGTACACCCAAAAGAGACAAATATGTCCTTCCTCGACC
CTATCAGCGGAGCCTGGGCCTCCATCTCCGGTACTGCATCAGTGATCGGTGATCCCGAAATCGTGAAGAAGCACT
ACTCGCCCGGACTCAGAGCATGGATTGGCGATATGGGCGATGGTGTGCACGATGGCGGACCCTCAGATCCCCGGA
TTGGCGTCATTAAGCTCGAGGCTAAGTTAGTCACGCATGTTGTTCCCCACAGGGGCCTGCTTGGGCGTGCCTATG
AAAATATTAAGGGTGCCGTGGAGGGTACCGTTCCTAATGTCAACGGCATTCGAGAGATGAGTTTGGAGGAATTGG
CCGAGTGTATGTTTCCTTTCTCTCCTTTTTCATCTTTGAATATGTGCCACGGACATGCTAACTGGTCTCTGTAGG
GCGCGTGACGCATCAGGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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