Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5942.t1
Gene name
Locationscaffold_15:202136..202778
Strand-
Gene length (bp)642
Transcript length (bp)642
Coding sequence length (bp)642
Protein length (aa) 214

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12171 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 5.6E-08 99 123
PF12874 zf-met Zinc-finger of C2H2 type 1.9E-05 99 123

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5942.t1
MSGPNSYGTPVSDTAFRKTWDREEYAKKAADDEAKRKAEGKARYEAKLLGKKYHAPVDYSSLEDTTARNQRLDVA
SMVGKTMIVPAGSGMGKRGLGAGFYCKDCDLTYKDNLQLVEHLNSKQHLIATGQSGEVKRANVEDVRLRLRMLSH
RKRQRDEEERKAWQLDLGVRLKEREEIDAKEREEKRRKRTEKRKKEKVKKEDDSWEGRLGIIC*
Coding >Pro_DTO377G3_2|g5942.t1
ATGTCAGGACCAAACTCCTACGGCACCCCGGTGTCGGACACGGCCTTTCGCAAAACCTGGGACCGCGAAGAATAC
GCCAAAAAAGCCGCCGACGATGAAGCAAAGCGCAAAGCCGAAGGCAAAGCCCGCTACGAAGCGAAGCTACTGGGC
AAGAAATACCACGCACCAGTCGACTACAGCTCGCTCGAGGATACCACAGCCCGCAATCAGCGCCTGGACGTCGCG
TCCATGGTGGGCAAGACGATGATTGTGCCCGCAGGCTCGGGGATGGGCAAACGCGGCCTCGGCGCTGGATTTTAC
TGCAAGGACTGTGATCTTACCTACAAGGATAACTTGCAGCTTGTGGAGCACTTGAACAGCAAGCAGCATCTGATT
GCGACGGGGCAGAGTGGCGAGGTGAAGAGGGCGAATGTTGAGGACGTGCGCTTGCGATTGAGGATGCTTTCGCAT
CGGAAGCGTCAGAGGGACGAGGAAGAGCGCAAGGCTTGGCAGCTTGATCTGGGGGTGCGGCTCAAGGAGCGGGAG
GAGATTGATGCCAAAGAGAGGGAGGAGAAGAGGCGCAAGCGCACTGAGAAGCGGAAGAAGGAGAAGGTTAAGAAG
GAGGATGATAGCTGGGAGGGCCGGTTGGGGATCATTTGTTGA
Transcript >Pro_DTO377G3_2|g5942.t1
ATGTCAGGACCAAACTCCTACGGCACCCCGGTGTCGGACACGGCCTTTCGCAAAACCTGGGACCGCGAAGAATAC
GCCAAAAAAGCCGCCGACGATGAAGCAAAGCGCAAAGCCGAAGGCAAAGCCCGCTACGAAGCGAAGCTACTGGGC
AAGAAATACCACGCACCAGTCGACTACAGCTCGCTCGAGGATACCACAGCCCGCAATCAGCGCCTGGACGTCGCG
TCCATGGTGGGCAAGACGATGATTGTGCCCGCAGGCTCGGGGATGGGCAAACGCGGCCTCGGCGCTGGATTTTAC
TGCAAGGACTGTGATCTTACCTACAAGGATAACTTGCAGCTTGTGGAGCACTTGAACAGCAAGCAGCATCTGATT
GCGACGGGGCAGAGTGGCGAGGTGAAGAGGGCGAATGTTGAGGACGTGCGCTTGCGATTGAGGATGCTTTCGCAT
CGGAAGCGTCAGAGGGACGAGGAAGAGCGCAAGGCTTGGCAGCTTGATCTGGGGGTGCGGCTCAAGGAGCGGGAG
GAGATTGATGCCAAAGAGAGGGAGGAGAAGAGGCGCAAGCGCACTGAGAAGCGGAAGAAGGAGAAGGTTAAGAAG
GAGGATGATAGCTGGGAGGGCCGGTTGGGGATCATTTGTTGA
Gene >Pro_DTO377G3_2|g5942.t1
ATGTCAGGACCAAACTCCTACGGCACCCCGGTGTCGGACACGGCCTTTCGCAAAACCTGGGACCGCGAAGAATAC
GCCAAAAAAGCCGCCGACGATGAAGCAAAGCGCAAAGCCGAAGGCAAAGCCCGCTACGAAGCGAAGCTACTGGGC
AAGAAATACCACGCACCAGTCGACTACAGCTCGCTCGAGGATACCACAGCCCGCAATCAGCGCCTGGACGTCGCG
TCCATGGTGGGCAAGACGATGATTGTGCCCGCAGGCTCGGGGATGGGCAAACGCGGCCTCGGCGCTGGATTTTAC
TGCAAGGACTGTGATCTTACCTACAAGGATAACTTGCAGCTTGTGGAGCACTTGAACAGCAAGCAGCATCTGATT
GCGACGGGGCAGAGTGGCGAGGTGAAGAGGGCGAATGTTGAGGACGTGCGCTTGCGATTGAGGATGCTTTCGCAT
CGGAAGCGTCAGAGGGACGAGGAAGAGCGCAAGGCTTGGCAGCTTGATCTGGGGGTGCGGCTCAAGGAGCGGGAG
GAGATTGATGCCAAAGAGAGGGAGGAGAAGAGGCGCAAGCGCACTGAGAAGCGGAAGAAGGAGAAGGTTAAGAAG
GAGGATGATAGCTGGGAGGGCCGGTTGGGGATCATTTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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