Protein ID | Pro_DTO377G3_2|g5941.t1 |
Gene name | |
Location | scaffold_15:199192..201925 |
Strand | + |
Gene length (bp) | 2733 |
Transcript length (bp) | 2568 |
Coding sequence length (bp) | 2568 |
Protein length (aa) | 856 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00653 | BIR | Inhibitor of Apoptosis domain | 1.9E-23 | 11 | 96 |
PF00653 | BIR | Inhibitor of Apoptosis domain | 1.8E-22 | 123 | 195 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 19.13 | 10.81 | 27.46 |
5d_25C | Five days - 25 degrees Celsius | 15.10 | 8.00 | 22.20 |
7d_25C | Seven days - 25 degrees Celsius | 14.96 | 7.83 | 22.10 |
10d_25C | Ten days - 25 degrees Celsius | 8.18 | 3.67 | 12.68 |
7d_15C | Seven days - 15 degrees Celsius | 14.61 | 6.83 | 22.39 |
7d_30C | Seven days - 30 degrees Celsius | 15.34 | 8.15 | 22.54 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.404011 | no |
3d_25C | 7d_25C | 0.386010 | no |
3d_25C | 7d_15C | 0.375658 | no |
3d_25C | 7d_30C | 0.453151 | no |
3d_25C | 10d_25C | 0.001804 | yes |
5d_25C | 7d_25C | 0.983368 | no |
5d_25C | 7d_15C | 0.939932 | no |
5d_25C | 7d_30C | 0.971143 | no |
5d_25C | 10d_25C | 0.027506 | yes |
7d_25C | 7d_15C | 0.957768 | no |
7d_25C | 7d_30C | 0.952797 | no |
7d_25C | 10d_25C | 0.029770 | yes |
7d_15C | 7d_30C | 0.910799 | no |
7d_15C | 10d_25C | 0.050710 | no |
7d_30C | 10d_25C | 0.022435 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5941.t1 MGSEMDTFAARLASFDLVLKPEKRRSSGTKTPKAITWPHQRPSPAELAHAGFYYKPYETNPDNTTCFQCHRALDG WEEDDNPITEHLKHAPDCGWAIMMDLQQSSSNPASIEDPTGDRITQARLATFGTVWPHDGKKGWVCQSEKMVEGG WYFCPTDESNDLASCVYCKLSLDGWEPKDDPFDEHYRRSSDCSFFVFAQPPGKKSKSARAKKPRVSKASSRLSTQ SVGSVASEAPDMEVDDPMGQSIMSQSSTKSKSTKKAPKSKSKGTKTKKEEPAEVESQIDAEIEEVAQTEPVKPKR AGKGKKRTSEDIKDEPNPVAMEEKEPSQPPAEPPAKRRDTKTRSSSITRSYNYEHSDSAMADARPVDEATSEEET TRGRKPTRKRASKTRKVSDVPVASKAPSKARAPRDSEIEAEIEAGLEADIPTPAEPEPEIEAEPAEPRASKKTKS SKKSKAVARIPEATVHNQVEDVSDREDRSDPHVEPVDDEPEAPAPKTKLAKGSKKKGTKKTKTEETIKAQSPEPR ESLGLRGPDVRDDSERHDSFVSVEIISKEPENAPEPEEPIAKAESKKISKKKDGTSTKEKKSKKSEKKAEQAPVL QPSVEEHRAEPSVEEQDDEFETTDDLPDQLEIVNPSPPQQISPEPQSHIKTPSLPPKTAKRYSDIPHEEHLAETL VQSQISPHEVHEPRRNSNRSNRAVSPLPPAHQNTPSPSPQSSDAENRPPSRPSASRAPVQPTPKQPEFRVPLAVS TPSPSKRNANGGFGPSGHPWTPVDIDEVLFGEASEKENADLSGLFRGAKASLTSPEKKMTVQEWIAWNAKNGEER LKRECERLVSQFEKEGGRAMRRLEAIECID* |
Coding | >Pro_DTO377G3_2|g5941.t1 ATGGGCTCTGAAATGGATACCTTTGCGGCCCGCCTAGCCAGCTTCGATTTAGTGCTGAAGCCGGAGAAACGCAGA TCTTCCGGCACAAAAACACCCAAAGCGATTACATGGCCGCACCAGCGACCTTCACCAGCTGAGTTGGCACACGCT GGATTCTACTACAAACCATACGAGACAAATCCCGACAACACAACATGTTTCCAGTGCCACCGGGCGCTGGATGGC TGGGAGGAGGACGACAATCCCATCACAGAGCATCTCAAGCATGCGCCCGACTGCGGATGGGCCATCATGATGGAC CTCCAACAGAGTAGCTCCAACCCCGCCTCGATTGAAGACCCTACGGGCGACCGAATTACGCAAGCGAGACTGGCA ACATTTGGTACAGTGTGGCCTCATGACGGGAAAAAGGGCTGGGTATGCCAGTCGGAGAAGATGGTAGAAGGCGGA TGGTATTTCTGCCCTACAGACGAGAGCAATGACCTGGCCAGTTGTGTCTATTGCAAGTTGTCTTTGGACGGTTGG GAGCCCAAAGACGACCCATTTGACGAACACTATCGCCGCTCCTCGGATTGTTCATTCTTTGTCTTCGCCCAGCCA CCAGGAAAGAAGAGCAAATCCGCTCGTGCTAAGAAACCTCGGGTTTCCAAGGCATCCTCCCGGCTCTCAACCCAG TCCGTTGGTTCAGTTGCATCCGAAGCGCCCGATATGGAAGTAGATGACCCGATGGGCCAAAGCATCATGTCCCAA TCCAGCACAAAATCCAAATCTACGAAGAAGGCACCGAAGAGCAAATCAAAGGGGACCAAGACTAAGAAGGAAGAA CCAGCGGAGGTGGAAAGCCAAATTGACGCCGAAATTGAAGAAGTCGCCCAAACAGAGCCTGTCAAACCTAAACGT GCAGGCAAAGGAAAGAAGAGGACCAGTGAGGATATCAAGGATGAACCAAACCCAGTTGCCATGGAGGAAAAAGAG CCATCGCAGCCGCCAGCAGAACCTCCAGCGAAGAGACGCGACACAAAAACACGCAGCAGCAGCATTACTCGCAGC TACAATTATGAACACAGTGACTCTGCAATGGCAGACGCAAGGCCGGTGGATGAAGCTACTTCGGAAGAAGAAACC ACGAGAGGTCGCAAGCCCACGAGAAAGAGAGCGTCCAAGACCCGCAAGGTCTCCGATGTTCCTGTTGCATCAAAA GCCCCGTCAAAGGCGCGAGCTCCTCGTGACTCCGAGATCGAAGCGGAAATCGAAGCAGGCCTCGAAGCTGATATC CCCACACCTGCCGAACCCGAGCCTGAGATCGAGGCTGAGCCAGCAGAGCCACGGGCGTCGAAGAAGACAAAATCG AGCAAAAAGTCCAAGGCTGTGGCTAGAATTCCCGAAGCGACCGTGCATAATCAAGTAGAAGATGTCAGTGATCGC GAGGACCGTTCAGATCCCCACGTGGAACCGGTTGATGATGAACCGGAGGCGCCAGCCCCAAAGACCAAGCTGGCA AAAGGATCTAAGAAGAAGGGGACAAAGAAAACCAAGACCGAGGAGACGATAAAAGCACAGTCGCCAGAGCCTCGA GAATCCTTAGGGCTCAGGGGTCCCGATGTTCGGGATGATTCCGAGCGTCATGACTCCTTCGTCTCCGTCGAGATT ATTAGCAAGGAGCCGGAGAATGCACCGGAGCCCGAAGAACCAATCGCCAAGGCTGAATCGAAGAAGATTTCCAAG AAGAAGGATGGCACATCAACGAAAGAGAAGAAGTCCAAGAAATCCGAGAAAAAGGCGGAGCAAGCTCCTGTTCTT CAACCCTCAGTCGAAGAACATCGCGCCGAACCGTCAGTCGAGGAACAAGACGATGAATTCGAGACTACAGACGAT TTGCCTGACCAGCTTGAGATAGTCAACCCTTCCCCTCCACAACAAATATCTCCCGAGCCACAATCTCATATTAAG ACACCCAGTCTACCGCCAAAGACTGCCAAACGGTATAGCGATATCCCACACGAAGAGCATCTTGCGGAGACCTTA GTCCAAAGCCAGATCTCCCCTCACGAAGTGCATGAGCCTCGACGGAATTCAAACCGCTCTAACCGGGCCGTTTCA CCACTTCCTCCAGCCCACCAAAACACTCCCTCGCCGTCACCCCAGTCATCAGATGCAGAAAACCGGCCGCCATCG CGGCCCTCAGCATCCCGTGCACCAGTCCAACCAACACCCAAGCAACCTGAGTTCCGAGTCCCCCTGGCAGTTAGT ACCCCATCGCCATCTAAGCGCAACGCCAATGGTGGATTCGGACCTTCTGGCCATCCATGGACACCGGTGGATATT GATGAAGTGCTGTTTGGAGAGGCTAGCGAGAAGGAAAACGCAGATTTATCCGGACTGTTCAGAGGCGCGAAAGCC AGCTTGACTAGCCCAGAGAAGAAAATGACAGTCCAAGAATGGATCGCGTGGAACGCAAAGAATGGCGAAGAACGA CTGAAGCGAGAATGCGAGCGACTTGTCAGCCAATTCGAGAAGGAAGGTGGCCGAGCAATGCGACGGCTCGAAGCT ATCGAGTGCATCGACTAA |
Transcript | >Pro_DTO377G3_2|g5941.t1 ATGGGCTCTGAAATGGATACCTTTGCGGCCCGCCTAGCCAGCTTCGATTTAGTGCTGAAGCCGGAGAAACGCAGA TCTTCCGGCACAAAAACACCCAAAGCGATTACATGGCCGCACCAGCGACCTTCACCAGCTGAGTTGGCACACGCT GGATTCTACTACAAACCATACGAGACAAATCCCGACAACACAACATGTTTCCAGTGCCACCGGGCGCTGGATGGC TGGGAGGAGGACGACAATCCCATCACAGAGCATCTCAAGCATGCGCCCGACTGCGGATGGGCCATCATGATGGAC CTCCAACAGAGTAGCTCCAACCCCGCCTCGATTGAAGACCCTACGGGCGACCGAATTACGCAAGCGAGACTGGCA ACATTTGGTACAGTGTGGCCTCATGACGGGAAAAAGGGCTGGGTATGCCAGTCGGAGAAGATGGTAGAAGGCGGA TGGTATTTCTGCCCTACAGACGAGAGCAATGACCTGGCCAGTTGTGTCTATTGCAAGTTGTCTTTGGACGGTTGG GAGCCCAAAGACGACCCATTTGACGAACACTATCGCCGCTCCTCGGATTGTTCATTCTTTGTCTTCGCCCAGCCA CCAGGAAAGAAGAGCAAATCCGCTCGTGCTAAGAAACCTCGGGTTTCCAAGGCATCCTCCCGGCTCTCAACCCAG TCCGTTGGTTCAGTTGCATCCGAAGCGCCCGATATGGAAGTAGATGACCCGATGGGCCAAAGCATCATGTCCCAA TCCAGCACAAAATCCAAATCTACGAAGAAGGCACCGAAGAGCAAATCAAAGGGGACCAAGACTAAGAAGGAAGAA CCAGCGGAGGTGGAAAGCCAAATTGACGCCGAAATTGAAGAAGTCGCCCAAACAGAGCCTGTCAAACCTAAACGT GCAGGCAAAGGAAAGAAGAGGACCAGTGAGGATATCAAGGATGAACCAAACCCAGTTGCCATGGAGGAAAAAGAG CCATCGCAGCCGCCAGCAGAACCTCCAGCGAAGAGACGCGACACAAAAACACGCAGCAGCAGCATTACTCGCAGC TACAATTATGAACACAGTGACTCTGCAATGGCAGACGCAAGGCCGGTGGATGAAGCTACTTCGGAAGAAGAAACC ACGAGAGGTCGCAAGCCCACGAGAAAGAGAGCGTCCAAGACCCGCAAGGTCTCCGATGTTCCTGTTGCATCAAAA GCCCCGTCAAAGGCGCGAGCTCCTCGTGACTCCGAGATCGAAGCGGAAATCGAAGCAGGCCTCGAAGCTGATATC CCCACACCTGCCGAACCCGAGCCTGAGATCGAGGCTGAGCCAGCAGAGCCACGGGCGTCGAAGAAGACAAAATCG AGCAAAAAGTCCAAGGCTGTGGCTAGAATTCCCGAAGCGACCGTGCATAATCAAGTAGAAGATGTCAGTGATCGC GAGGACCGTTCAGATCCCCACGTGGAACCGGTTGATGATGAACCGGAGGCGCCAGCCCCAAAGACCAAGCTGGCA AAAGGATCTAAGAAGAAGGGGACAAAGAAAACCAAGACCGAGGAGACGATAAAAGCACAGTCGCCAGAGCCTCGA GAATCCTTAGGGCTCAGGGGTCCCGATGTTCGGGATGATTCCGAGCGTCATGACTCCTTCGTCTCCGTCGAGATT ATTAGCAAGGAGCCGGAGAATGCACCGGAGCCCGAAGAACCAATCGCCAAGGCTGAATCGAAGAAGATTTCCAAG AAGAAGGATGGCACATCAACGAAAGAGAAGAAGTCCAAGAAATCCGAGAAAAAGGCGGAGCAAGCTCCTGTTCTT CAACCCTCAGTCGAAGAACATCGCGCCGAACCGTCAGTCGAGGAACAAGACGATGAATTCGAGACTACAGACGAT TTGCCTGACCAGCTTGAGATAGTCAACCCTTCCCCTCCACAACAAATATCTCCCGAGCCACAATCTCATATTAAG ACACCCAGTCTACCGCCAAAGACTGCCAAACGGTATAGCGATATCCCACACGAAGAGCATCTTGCGGAGACCTTA GTCCAAAGCCAGATCTCCCCTCACGAAGTGCATGAGCCTCGACGGAATTCAAACCGCTCTAACCGGGCCGTTTCA CCACTTCCTCCAGCCCACCAAAACACTCCCTCGCCGTCACCCCAGTCATCAGATGCAGAAAACCGGCCGCCATCG CGGCCCTCAGCATCCCGTGCACCAGTCCAACCAACACCCAAGCAACCTGAGTTCCGAGTCCCCCTGGCAGTTAGT ACCCCATCGCCATCTAAGCGCAACGCCAATGGTGGATTCGGACCTTCTGGCCATCCATGGACACCGGTGGATATT GATGAAGTGCTGTTTGGAGAGGCTAGCGAGAAGGAAAACGCAGATTTATCCGGACTGTTCAGAGGCGCGAAAGCC AGCTTGACTAGCCCAGAGAAGAAAATGACAGTCCAAGAATGGATCGCGTGGAACGCAAAGAATGGCGAAGAACGA CTGAAGCGAGAATGCGAGCGACTTGTCAGCCAATTCGAGAAGGAAGGTGGCCGAGCAATGCGACGGCTCGAAGCT ATCGAGTGCATCGACTAA |
Gene | >Pro_DTO377G3_2|g5941.t1 ATGGGCTCTGAAATGGATACCTTTGCGGCCCGCCTAGCCAGCTTCGATTTAGTGCTGAAGCCGGAGAAACGCAGA TCTTCCGGCACAAAAACACCCAAAGCGATTACATGGCCGCACCAGCGACCTTCACCAGCTGAGGTATGTCATTCT TCGAAGAGATTACACGCGCCGTTTAAGATGATTGACTTGGCGGGATTATAGTTGGCACACGCTGGATTCTACTAC AAACCATACGAGACAAATCCCGACAACACAACATGTTTCCAGTGCCACCGGGCGCTGGATGGCTGGGAGGAGGAC GACAATCCCATCACAGAGCATCTCAAGCATGCGCCCGACTGCGGATGGGCCATCATGATGGACCTCCAACAGAGT AGCTCCAACCCCGCCTCGATTGAAGACCCTACGGGCGACCGAATTACGCAAGCGAGACTGGCAACATTTGGTACA GTGTGGCCTCATGACGGGAAAAAGGGCTGGGTATGCCAGTCGGAGAAGGTAAATCGTGACTTCACCGTATTCATA TTATTTTGGCTCACAACAATGACAGATGGTAGAAGGCGGATGGTATTTCTGCCCTACAGACGAGAGCAATGACCT GGCCAGTTGTGTCTATTGCAAGTTGTCTTTGGACGGTTGGGAGCCCAAAGACGACCCATTGTGAGTATCCATCGC TCTTTCTTAGTTGGACGATTGCTGACTTACCCCAGTGACGAACACTATCGCCGCTCCTCGGATTGTTCATTCTTT GTCTTCGCCCAGCCACCAGGAAAGAAGAGCAAATCCGCTCGTGCTAAGAAACCTCGGGTTTCCAAGGCATCCTCC CGGCTCTCAACCCAGTCCGTTGGTTCAGTTGCATCCGAAGCGCCCGATATGGAAGTAGATGACCCGATGGGCCAA AGCATCATGTCCCAATCCAGCACAAAATCCAAATCTACGAAGAAGGCACCGAAGAGCAAATCAAAGGGGACCAAG ACTAAGAAGGAAGAACCAGCGGAGGTGGAAAGCCAAATTGACGCCGAAATTGAAGAAGTCGCCCAAACAGAGCCT GTCAAACCTAAACGTGCAGGCAAAGGAAAGAAGAGGACCAGTGAGGATATCAAGGATGAACCAAACCCAGTTGCC ATGGAGGAAAAAGAGCCATCGCAGCCGCCAGCAGAACCTCCAGCGAAGAGACGCGACACAAAAACACGCAGCAGC AGCATTACTCGCAGCTACAATTATGAACACAGTGACTCTGCAATGGCAGACGCAAGGCCGGTGGATGAAGCTACT TCGGAAGAAGAAACCACGAGAGGTCGCAAGCCCACGAGAAAGAGAGCGTCCAAGACCCGCAAGGTCTCCGATGTT CCTGTTGCATCAAAAGCCCCGTCAAAGGCGCGAGCTCCTCGTGACTCCGAGATCGAAGCGGAAATCGAAGCAGGC CTCGAAGCTGATATCCCCACACCTGCCGAACCCGAGCCTGAGATCGAGGCTGAGCCAGCAGAGCCACGGGCGTCG AAGAAGACAAAATCGAGCAAAAAGTCCAAGGCTGTGGCTAGAATTCCCGAAGCGACCGTGCATAATCAAGTAGAA GATGTCAGTGATCGCGAGGACCGTTCAGATCCCCACGTGGAACCGGTTGATGATGAACCGGAGGCGCCAGCCCCA AAGACCAAGCTGGCAAAAGGATCTAAGAAGAAGGGGACAAAGAAAACCAAGACCGAGGAGACGATAAAAGCACAG TCGCCAGAGCCTCGAGAATCCTTAGGGCTCAGGGGTCCCGATGTTCGGGATGATTCCGAGCGTCATGACTCCTTC GTCTCCGTCGAGATTATTAGCAAGGAGCCGGAGAATGCACCGGAGCCCGAAGAACCAATCGCCAAGGCTGAATCG AAGAAGATTTCCAAGAAGAAGGATGGCACATCAACGAAAGAGAAGAAGTCCAAGAAATCCGAGAAAAAGGCGGAG CAAGCTCCTGTTCTTCAACCCTCAGTCGAAGAACATCGCGCCGAACCGTCAGTCGAGGAACAAGACGATGAATTC GAGACTACAGACGATTTGCCTGACCAGCTTGAGATAGTCAACCCTTCCCCTCCACAACAAATATCTCCCGAGCCA CAATCTCATATTAAGACACCCAGTCTACCGCCAAAGACTGCCAAACGGTATAGCGATATCCCACACGAAGAGCAT CTTGCGGAGACCTTAGTCCAAAGCCAGATCTCCCCTCACGAAGTGCATGAGCCTCGACGGAATTCAAACCGCTCT AACCGGGCCGTTTCACCACTTCCTCCAGCCCACCAAAACACTCCCTCGCCGTCACCCCAGTCATCAGATGCAGAA AACCGGCCGCCATCGCGGCCCTCAGCATCCCGTGCACCAGTCCAACCAACACCCAAGCAACCTGAGTTCCGAGTC CCCCTGGCAGTTAGTACCCCATCGCCATCTAAGCGCAACGCCAATGGTGGATTCGGACCTTCTGGCCATCCATGG ACACCGGTGGATATTGATGAAGTGCTGTTTGGAGAGGCTAGCGAGAAGGAAAACGCAGATTTATCCGGACTGTTC AGAGGCGCGAAAGCCAGCTTGACTAGCCCAGAGAAGAAAATGACAGTCCAAGAATGGATCGCGTGGAACGCAAAG AATGGCGAAGAACGACTGAAGCGAGAATGCGAGCGACTTGTCAGCCAATTCGAGAAGGAAGGTGGCCGAGCAATG CGACGGCTCGAAGCTATCGAGTGCATCGACTAA |