Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g5922.t1
Gene name
Location	scaffold_15:157327..158664
Strand	+
Gene length (bp)	1337
Transcript length (bp)	990
Coding sequence length (bp)	990
Protein length (aa)	330

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01269	Fibrillarin	Fibrillarin	1.5E-104	93	326
PF08704	GCD14	tRNA methyltransferase complex GCD14 subunit	1.0E-05	168	284

GO

GO Term	Description	Terminal node
GO:0006364	rRNA processing	Yes
GO:0030488	tRNA methylation	Yes
GO:0008168	methyltransferase activity	Yes
GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	Yes
GO:0003723	RNA binding	Yes
GO:0031515	tRNA (m1A) methyltransferase complex	Yes
GO:0043414	macromolecule methylation	No
GO:0140101	catalytic activity, acting on a tRNA	No
GO:0071704	organic substance metabolic process	No
GO:0044238	primary metabolic process	No
GO:1990234	transferase complex	No
GO:0016426	tRNA (adenine) methyltransferase activity	No
GO:0003824	catalytic activity	No
GO:0044260	cellular macromolecule metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0009987	cellular process	No
GO:0034470	ncRNA processing	No
GO:0008033	tRNA processing	No
GO:0044444	cytoplasmic part	No
GO:0016740	transferase activity	No
GO:0006399	tRNA metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0008175	tRNA methyltransferase activity	No
GO:0009451	RNA modification	No
GO:1901363	heterocyclic compound binding	No
GO:0006400	tRNA modification	No
GO:0090304	nucleic acid metabolic process	No
GO:0034708	methyltransferase complex	No
GO:0046483	heterocycle metabolic process	No
GO:0044464	cell part	No
GO:0043527	tRNA methyltransferase complex	No
GO:0006807	nitrogen compound metabolic process	No
GO:0008173	RNA methyltransferase activity	No
GO:0044237	cellular metabolic process	No
GO:0034660	ncRNA metabolic process	No
GO:0016070	RNA metabolic process	No
GO:1902494	catalytic complex	No
GO:0005488	binding	No
GO:0016072	rRNA metabolic process	No
GO:0044424	intracellular part	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	No
GO:0003676	nucleic acid binding	No
GO:0043412	macromolecule modification	No
GO:0043170	macromolecule metabolic process	No
GO:0003674	molecular_function	No
GO:0008150	biological_process	No
GO:0140098	catalytic activity, acting on RNA	No
GO:0032991	protein-containing complex	No
GO:0008152	metabolic process	No
GO:0005575	cellular_component	No
GO:0001510	RNA methylation	No
GO:0032259	methylation	No
GO:0016741	transferase activity, transferring one-carbon groups	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0006396	RNA processing	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5922.t1 MSSFAPRGRGGFGGDRGGGRGGRGGFGDRGGRGGGRGGFGDRGGRGGGRGGFGDRGGRGGGRGAPRGGRGAPRGG RGAPRGGGGARGGAKVVIEPHRHAGIFVARGGKEDMLVTKNLTPGTAVYGEKRISVEGPATEDGTVTKNEYRVWN PFRSKLAAGVLGGLDDIYMKPGSKVLYIGAASGTSVSHVADIVGPTGNVYAVEFSHRSGRDLIGMATHRTNVIPI VEDARHPLRYRMLVPMVDVIFADVAQPDQARIVGLNAHMFLKDGGGVIVSVKANCIDSTAKPEVVFAKEVQKMRE EKIKPKEQLTLEPFERDHCIVAGIYKRTA*
Coding	>Pro_DTO377G3_2\|g5922.t1 ATGTCTTCTTTCGCTCCTCGTGGACGTGGTGGATTTGGTGGTGATCGCGGCGGTGGCCGTGGTGGTCGAGGTGGC TTCGGCGACCGTGGTGGCCGTGGAGGTGGCCGTGGTGGCTTCGGTGATCGTGGCGGCCGTGGAGGTGGCCGTGGT GGATTCGGTGACCGTGGCGGCCGTGGAGGTGGTCGCGGTGCCCCTCGTGGTGGCCGTGGTGCTCCTCGTGGTGGC CGTGGTGCTCCCCGCGGTGGTGGTGGTGCTCGTGGTGGTGCCAAGGTTGTCATTGAGCCTCACCGTCACGCCGGT ATCTTCGTCGCTCGCGGTGGTAAGGAAGACATGCTTGTGACGAAAAACCTTACGCCTGGAACTGCTGTCTACGGC GAGAAGCGCATTTCCGTCGAGGGCCCCGCAACTGAGGATGGTACTGTCACTAAGAACGAGTACCGTGTCTGGAAC CCCTTCCGTTCTAAGTTGGCTGCTGGTGTGTTGGGTGGTCTTGATGATATCTACATGAAGCCCGGCTCCAAGGTT CTTTACATCGGTGCTGCCTCCGGTACCTCCGTTTCTCACGTCGCTGATATTGTCGGCCCCACTGGTAACGTCTAC GCCGTCGAGTTCTCCCACCGCTCTGGCCGTGATCTGATCGGCATGGCCACTCACCGTACCAACGTCATCCCCATT GTTGAGGATGCCCGTCACCCTCTCCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTTGCCGATGTTGCC CAGCCCGATCAGGCCCGTATTGTCGGATTGAACGCCCACATGTTCCTCAAGGATGGAGGTGGTGTCATTGTCTCC GTCAAGGCCAACTGTATTGACAGCACAGCCAAGCCCGAGGTTGTGTTCGCTAAGGAGGTCCAGAAGATGCGCGAG GAGAAGATTAAGCCCAAGGAGCAGCTGACCCTCGAGCCTTTCGAGCGTGACCACTGTATCGTCGCTGGTATCTAC AAGCGTACCGCATAA
Transcript	>Pro_DTO377G3_2\|g5922.t1 ATGTCTTCTTTCGCTCCTCGTGGACGTGGTGGATTTGGTGGTGATCGCGGCGGTGGCCGTGGTGGTCGAGGTGGC TTCGGCGACCGTGGTGGCCGTGGAGGTGGCCGTGGTGGCTTCGGTGATCGTGGCGGCCGTGGAGGTGGCCGTGGT GGATTCGGTGACCGTGGCGGCCGTGGAGGTGGTCGCGGTGCCCCTCGTGGTGGCCGTGGTGCTCCTCGTGGTGGC CGTGGTGCTCCCCGCGGTGGTGGTGGTGCTCGTGGTGGTGCCAAGGTTGTCATTGAGCCTCACCGTCACGCCGGT ATCTTCGTCGCTCGCGGTGGTAAGGAAGACATGCTTGTGACGAAAAACCTTACGCCTGGAACTGCTGTCTACGGC GAGAAGCGCATTTCCGTCGAGGGCCCCGCAACTGAGGATGGTACTGTCACTAAGAACGAGTACCGTGTCTGGAAC CCCTTCCGTTCTAAGTTGGCTGCTGGTGTGTTGGGTGGTCTTGATGATATCTACATGAAGCCCGGCTCCAAGGTT CTTTACATCGGTGCTGCCTCCGGTACCTCCGTTTCTCACGTCGCTGATATTGTCGGCCCCACTGGTAACGTCTAC GCCGTCGAGTTCTCCCACCGCTCTGGCCGTGATCTGATCGGCATGGCCACTCACCGTACCAACGTCATCCCCATT GTTGAGGATGCCCGTCACCCTCTCCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTTGCCGATGTTGCC CAGCCCGATCAGGCCCGTATTGTCGGATTGAACGCCCACATGTTCCTCAAGGATGGAGGTGGTGTCATTGTCTCC GTCAAGGCCAACTGTATTGACAGCACAGCCAAGCCCGAGGTTGTGTTCGCTAAGGAGGTCCAGAAGATGCGCGAG GAGAAGATTAAGCCCAAGGAGCAGCTGACCCTCGAGCCTTTCGAGCGTGACCACTGTATCGTCGCTGGTATCTAC AAGCGTACCGCATAA
Gene	>Pro_DTO377G3_2\|g5922.t1 ATGTCTTCTTTCGCTCCTCGTGGACGTGGTGGATTTGGTGGTGATCGCGGCGGTGGCCGTGGTGGTCGAGGTTTG TTCAGTCCGATCCATTTGAGCAGCAAGCATTCAGGTCCAAAATCTCGCTGGTGATTCTACCGCACCGATGGCCAT GGTCCTGTTTCTTGTTGCGATACTATAGTTCACATTGCTGACTTGTTGAAGGTGGCTTCGGCGACCGTGGTGGCC GTGGAGGTGGCCGTGGTGGCTTCGGTGATCGTGGCGGCCGTGGAGGTGGCCGTGGTGGATTCGGTGACCGTGGCG GCCGTGGAGGTGGTCGCGGTGCCCCTCGTGGTGGCCGTGGTGCTCCTCGTGGTGGCCGTGGTGCTCCCCGCGGTG GTGGTGGTGCTCGTGGTGGTGCCAAGGTTGTCATTGTAAGTGTTGGAAATTCTCATGGACATGGGTATCAGTCAC TAACGTAATCTTTTCTCTTGCGAATAGGAGCCTCACCGTCACGCCGGTATCTTCGTCGCTCGCGGTGGTAAGGAA GACATGCTTGTGACGAAAAACCTTACGCCTGGAACTGCTGTCTACGGCGAGAAGCGCATTTCCGTCGAGGGCCCC GCAACTGAGGATGGTACTGTCACTAAGAACGAGTACCGTGTCTGGAACCCCTTCCGTTCTAAGGTAAATACTCCT CCTTATCCTGGGCTAAAGATGCATGGTATCCTTGGCGATTTCATCGAATTTTTCTCGGAATTCTTCAATATCGCC CCGATAGCCATGGCTGCCTTATTGTTTAGTCCTTCTTTTCTAACGTCTTCTCCCTTTTCTAGTTGGCTGCTGGTG TGTTGGGTGGTCTTGATGATATCTACATGAAGCCCGGCTCCAAGGTTCTTTACATCGGTGCTGCCTCCGGTACCT CCGTTTCTCACGTCGCTGATATTGTCGGCCCCACTGGTAACGTCTACGCCGTCGAGTTCTCCCACCGCTCTGGCC GTGATCTGATCGGCATGGCCACTCACCGTACCAACGTCATCCCCATTGTTGAGGATGCCCGTCACCCTCTCCGTT ACCGTATGCTCGTCCCCATGGTCGATGTCATCTTTGCCGATGTTGCCCAGCCCGATCAGGCCCGTATTGTCGGAT TGAACGCCCACATGTTCCTCAAGGATGGAGGTGGTGTCATTGTCTCCGTCAAGGCCAACTGTATTGACAGCACAG CCAAGCCCGAGGTTGTGTTCGCTAAGGAGGTCCAGAAGATGCGCGAGGAGAAGATTAAGCCCAAGGAGCAGCTGA CCCTCGAGCCTTTCGAGCGTGACCACTGTATCGTCGCTGGTATCTACAAGCGTACCGCATAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences