Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g5921.t1
Gene name
Location	scaffold_15:155785..156596
Strand	+
Gene length (bp)	811
Transcript length (bp)	756
Coding sequence length (bp)	756
Protein length (aa)	252

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11937	DUF3455	Protein of unknown function (DUF3455)	9.1E-47	73	250
PF11693	DUF2990	Protein of unknown function (DUF2990)	5.5E-32	8	70

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5921.t1 MRFASLIICLAAVSLAAPTSFLDDAYNWTEEMAEFYGKVSQYINTAKHNIRAPGACDVSKIALPSYASGMASPSG LKPRYVALGRGTQNYTCADSTSNSTPAAVGAVARLYNATCIAANYPDLLAKLPNLAYTVSLPTNEDASFPPANLD LMGHHFFTDVTPEFNLNTTPKKQNGIVMAKKGGALDAPSGSVSGQYGAVPWLYLTSTDGTVGNYKSVYRVNTAAG SSPTTCKGMPLAFQMQYAAVYYFFGE*
Coding	>Pro_DTO377G3_2\|g5921.t1 ATGCGCTTTGCTTCCCTCATCATCTGCCTGGCAGCAGTTTCGCTTGCTGCCCCAACAAGCTTCCTTGACGATGCA TACAACTGGACTGAGGAAATGGCAGAATTCTACGGAAAAGTGAGCCAGTACATCAACACCGCAAAACATAACATC AGAGCACCGGGGGCTTGCGATGTCTCTAAGATTGCCCTGCCTTCCTATGCTTCGGGAATGGCCAGCCCGTCAGGG CTAAAGCCAAGATACGTTGCACTCGGTCGAGGCACGCAGAACTACACATGTGCGGACTCTACTTCCAACTCCACA CCCGCGGCTGTAGGAGCTGTCGCAAGACTGTACAATGCCACATGTATTGCAGCCAACTACCCCGATCTCCTGGCA AAGCTCCCCAACCTTGCCTACACGGTTTCCCTACCGACCAACGAAGATGCCTCGTTCCCTCCCGCCAACCTCGAC TTGATGGGTCACCACTTCTTCACTGATGTAACCCCCGAGTTCAACTTGAACACCACTCCCAAAAAGCAGAATGGG ATTGTCATGGCAAAGAAGGGAGGTGCATTAGATGCACCCTCAGGTTCAGTGTCAGGGCAGTACGGTGCTGTGCCT TGGCTCTATCTCACTTCTACCGATGGCACGGTGGGCAACTACAAGAGTGTCTATCGAGTCAACACTGCCGCTGGA TCGTCACCAACGACCTGCAAGGGTATGCCACTCGCATTCCAAATGCAATATGCTGCGGTCTACTACTTTTTTGGA GAGTAA
Transcript	>Pro_DTO377G3_2\|g5921.t1 ATGCGCTTTGCTTCCCTCATCATCTGCCTGGCAGCAGTTTCGCTTGCTGCCCCAACAAGCTTCCTTGACGATGCA TACAACTGGACTGAGGAAATGGCAGAATTCTACGGAAAAGTGAGCCAGTACATCAACACCGCAAAACATAACATC AGAGCACCGGGGGCTTGCGATGTCTCTAAGATTGCCCTGCCTTCCTATGCTTCGGGAATGGCCAGCCCGTCAGGG CTAAAGCCAAGATACGTTGCACTCGGTCGAGGCACGCAGAACTACACATGTGCGGACTCTACTTCCAACTCCACA CCCGCGGCTGTAGGAGCTGTCGCAAGACTGTACAATGCCACATGTATTGCAGCCAACTACCCCGATCTCCTGGCA AAGCTCCCCAACCTTGCCTACACGGTTTCCCTACCGACCAACGAAGATGCCTCGTTCCCTCCCGCCAACCTCGAC TTGATGGGTCACCACTTCTTCACTGATGTAACCCCCGAGTTCAACTTGAACACCACTCCCAAAAAGCAGAATGGG ATTGTCATGGCAAAGAAGGGAGGTGCATTAGATGCACCCTCAGGTTCAGTGTCAGGGCAGTACGGTGCTGTGCCT TGGCTCTATCTCACTTCTACCGATGGCACGGTGGGCAACTACAAGAGTGTCTATCGAGTCAACACTGCCGCTGGA TCGTCACCAACGACCTGCAAGGGTATGCCACTCGCATTCCAAATGCAATATGCTGCGGTCTACTACTTTTTTGGA GAGTAA
Gene	>Pro_DTO377G3_2\|g5921.t1 ATGCGCTTTGCTTCCCTCATCATCTGCCTGGCAGCAGTTTCGCTTGCTGCCCCAACAAGCTTCCTTGACGATGCA TACAACTGGACTGAGGAAATGGCAGAATTCTACGGAAAAGTGAGCCAGTACATCAACACCGCAAAACATAACATC AGAGCACCGGGGGCTTGCGATGTCTCTAAGATTGCCCTGCCTTCCTATGCTTCGGGAATGGCCAGCCCGTCAGGG CTAAAGCCAAGATACGTTGCACTCGGTCGAGGCACGCAGGTATGACAAGCTCCTGAGATACTTTATTGAGTTACA TCGCTCATTATAGAACTAGAACTACACATGTGCGGACTCTACTTCCAACTCCACACCCGCGGCTGTAGGAGCTGT CGCAAGACTGTACAATGCCACATGTATTGCAGCCAACTACCCCGATCTCCTGGCAAAGCTCCCCAACCTTGCCTA CACGGTTTCCCTACCGACCAACGAAGATGCCTCGTTCCCTCCCGCCAACCTCGACTTGATGGGTCACCACTTCTT CACTGATGTAACCCCCGAGTTCAACTTGAACACCACTCCCAAAAAGCAGAATGGGATTGTCATGGCAAAGAAGGG AGGTGCATTAGATGCACCCTCAGGTTCAGTGTCAGGGCAGTACGGTGCTGTGCCTTGGCTCTATCTCACTTCTAC CGATGGCACGGTGGGCAACTACAAGAGTGTCTATCGAGTCAACACTGCCGCTGGATCGTCACCAACGACCTGCAA GGGTATGCCACTCGCATTCCAAATGCAATATGCTGCGGTCTACTACTTTTTTGGAGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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