Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5921.t1
Gene name
Locationscaffold_15:155785..156596
Strand+
Gene length (bp)811
Transcript length (bp)756
Coding sequence length (bp)756
Protein length (aa) 252

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11937 DUF3455 Protein of unknown function (DUF3455) 8.3E-47 73 250
PF11693 DUF2990 Protein of unknown function (DUF2990) 4.0E-31 8 70

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5921.t1
MRFASLIICLAAVSLAAPTSFLDDAYNWTEEMAEFYGKVSQYINTAKHNIRAPGACDVSKIALPSYASGMASPSG
LKPRYVALGRGTQNYTCADSTSNSTPAAVGAVARLYNATCIAANYPDLLAKLPNLAYTVSLPTNEDASFPPANLD
LMGHHFFTDVTPEFNLNTTPKKQNGIVMAKKGGALDAPSGSVSGQYGAVPWLYLTSTDGTVGNYKSVYRVNTAAG
SSPTTCKGMPLAFQMQYAAVYYFFGE*
Coding >Pro_DTO377G3_2|g5921.t1
ATGCGCTTTGCTTCCCTCATCATCTGCCTGGCAGCAGTTTCGCTTGCTGCCCCAACAAGCTTCCTTGACGATGCA
TACAACTGGACTGAGGAAATGGCAGAATTCTACGGAAAAGTGAGCCAGTACATCAACACCGCAAAACATAACATC
AGAGCACCGGGGGCTTGCGATGTCTCTAAGATTGCCCTGCCTTCCTATGCTTCGGGAATGGCCAGCCCGTCAGGG
CTAAAGCCAAGATACGTTGCACTCGGTCGAGGCACGCAGAACTACACATGTGCGGACTCTACTTCCAACTCCACA
CCCGCGGCTGTAGGAGCTGTCGCAAGACTGTACAATGCCACATGTATTGCAGCCAACTACCCCGATCTCCTGGCA
AAGCTCCCCAACCTTGCCTACACGGTTTCCCTACCGACCAACGAAGATGCCTCGTTCCCTCCCGCCAACCTCGAC
TTGATGGGTCACCACTTCTTCACTGATGTAACCCCCGAGTTCAACTTGAACACCACTCCCAAAAAGCAGAATGGG
ATTGTCATGGCAAAGAAGGGAGGTGCATTAGATGCACCCTCAGGTTCAGTGTCAGGGCAGTACGGTGCTGTGCCT
TGGCTCTATCTCACTTCTACCGATGGCACGGTGGGCAACTACAAGAGTGTCTATCGAGTCAACACTGCCGCTGGA
TCGTCACCAACGACCTGCAAGGGTATGCCACTCGCATTCCAAATGCAATATGCTGCGGTCTACTACTTTTTTGGA
GAGTAA
Transcript >Pro_DTO377G3_2|g5921.t1
ATGCGCTTTGCTTCCCTCATCATCTGCCTGGCAGCAGTTTCGCTTGCTGCCCCAACAAGCTTCCTTGACGATGCA
TACAACTGGACTGAGGAAATGGCAGAATTCTACGGAAAAGTGAGCCAGTACATCAACACCGCAAAACATAACATC
AGAGCACCGGGGGCTTGCGATGTCTCTAAGATTGCCCTGCCTTCCTATGCTTCGGGAATGGCCAGCCCGTCAGGG
CTAAAGCCAAGATACGTTGCACTCGGTCGAGGCACGCAGAACTACACATGTGCGGACTCTACTTCCAACTCCACA
CCCGCGGCTGTAGGAGCTGTCGCAAGACTGTACAATGCCACATGTATTGCAGCCAACTACCCCGATCTCCTGGCA
AAGCTCCCCAACCTTGCCTACACGGTTTCCCTACCGACCAACGAAGATGCCTCGTTCCCTCCCGCCAACCTCGAC
TTGATGGGTCACCACTTCTTCACTGATGTAACCCCCGAGTTCAACTTGAACACCACTCCCAAAAAGCAGAATGGG
ATTGTCATGGCAAAGAAGGGAGGTGCATTAGATGCACCCTCAGGTTCAGTGTCAGGGCAGTACGGTGCTGTGCCT
TGGCTCTATCTCACTTCTACCGATGGCACGGTGGGCAACTACAAGAGTGTCTATCGAGTCAACACTGCCGCTGGA
TCGTCACCAACGACCTGCAAGGGTATGCCACTCGCATTCCAAATGCAATATGCTGCGGTCTACTACTTTTTTGGA
GAGTAA
Gene >Pro_DTO377G3_2|g5921.t1
ATGCGCTTTGCTTCCCTCATCATCTGCCTGGCAGCAGTTTCGCTTGCTGCCCCAACAAGCTTCCTTGACGATGCA
TACAACTGGACTGAGGAAATGGCAGAATTCTACGGAAAAGTGAGCCAGTACATCAACACCGCAAAACATAACATC
AGAGCACCGGGGGCTTGCGATGTCTCTAAGATTGCCCTGCCTTCCTATGCTTCGGGAATGGCCAGCCCGTCAGGG
CTAAAGCCAAGATACGTTGCACTCGGTCGAGGCACGCAGGTATGACAAGCTCCTGAGATACTTTATTGAGTTACA
TCGCTCATTATAGAACTAGAACTACACATGTGCGGACTCTACTTCCAACTCCACACCCGCGGCTGTAGGAGCTGT
CGCAAGACTGTACAATGCCACATGTATTGCAGCCAACTACCCCGATCTCCTGGCAAAGCTCCCCAACCTTGCCTA
CACGGTTTCCCTACCGACCAACGAAGATGCCTCGTTCCCTCCCGCCAACCTCGACTTGATGGGTCACCACTTCTT
CACTGATGTAACCCCCGAGTTCAACTTGAACACCACTCCCAAAAAGCAGAATGGGATTGTCATGGCAAAGAAGGG
AGGTGCATTAGATGCACCCTCAGGTTCAGTGTCAGGGCAGTACGGTGCTGTGCCTTGGCTCTATCTCACTTCTAC
CGATGGCACGGTGGGCAACTACAAGAGTGTCTATCGAGTCAACACTGCCGCTGGATCGTCACCAACGACCTGCAA
GGGTATGCCACTCGCATTCCAAATGCAATATGCTGCGGTCTACTACTTTTTTGGAGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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