Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5915.t1
Gene name
Locationscaffold_15:139400..140948
Strand-
Gene length (bp)1548
Transcript length (bp)1401
Coding sequence length (bp)1401
Protein length (aa) 467

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02469 Fasciclin Fasciclin domain 6.5E-16 156 282
PF02469 Fasciclin Fasciclin domain 1.2E-14 296 430

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5915.t1
MRSTYLFLSVAASLASAFVILDESILAEIVSETRPATNDPSQADAEMSLLGISPDEHRGWGRDGDWRDDDEYPEH
GDWLGYGRWPGGDRPRHGGWPEHGEWPGYRGDCEDRHDRDGRPWDRYRHRPHRPIDACPGPFCHADKTTWELIRE
SEHTSRLAELIADDKDLIDILNGTTANHTFFALTNRALERLPRGRNGPSPKLMSKLLRYHILPGQFSIEHIAGHG
TLPTKLTEPALESTLPQRIVVREHQNGVMLNRRSRVVAADMKSKNGIIHIITSPLHPPRETRTILHQAPTDFSTF
TLALARTKLAHNLDPAQRQGGTTFVPTNVAFRRLGEKANRFLFSRRGEGCLRRHGGHAHEGEGKGGRGDGLEEDY
ANVRLVTLLKRELRVDVKKGFGEVDMRVNGFGRVGRMDLLARDGVVHVLDRVLIPPRKIQDQNEDEDGELIIEEL
VGRLDGCVYGMTRGEL*
Coding >Pro_DTO377G3_2|g5915.t1
ATGCGTTCCACTTACCTTTTCTTATCTGTGGCAGCTTCATTGGCCTCGGCCTTTGTCATCCTAGATGAGAGTATC
CTCGCGGAGATAGTCTCTGAGACTCGACCAGCCACGAATGATCCATCTCAAGCAGATGCCGAGATGAGCCTGCTG
GGCATCTCCCCGGATGAACATAGAGGCTGGGGAAGAGACGGTGACTGGCGCGATGATGATGAATATCCGGAGCAT
GGCGATTGGCTTGGCTACGGGCGATGGCCCGGTGGTGATCGGCCCAGACATGGGGGATGGCCCGAACACGGAGAA
TGGCCTGGATACCGAGGTGATTGCGAAGACAGACACGACCGCGACGGAAGACCATGGGACAGATACCGACACCGT
CCACACCGGCCAATCGATGCTTGTCCAGGCCCGTTCTGCCACGCGGACAAGACGACATGGGAGCTCATCAGAGAA
AGCGAGCATACATCCCGACTCGCCGAGCTCATCGCCGACGACAAAGACCTGATTGATATCCTAAATGGCACGACG
GCAAACCACACCTTCTTCGCGCTGACGAACCGTGCCCTAGAGAGACTTCCACGGGGAAGAAATGGCCCCAGTCCG
AAGCTCATGTCCAAGTTGCTGCGGTATCATATCCTGCCCGGTCAATTTTCAATCGAGCATATTGCTGGCCACGGG
ACGCTACCGACGAAGCTGACAGAGCCAGCTCTGGAATCGACTCTACCACAGAGGATCGTTGTCCGAGAGCACCAG
AACGGAGTGATGTTGAACCGGAGGAGTAGGGTTGTGGCAGCCGACATGAAATCCAAAAACGGAATAATCCACATA
ATAACCAGTCCCCTCCACCCACCCCGAGAGACACGCACGATACTGCACCAAGCACCAACCGACTTCAGCACCTTC
ACATTGGCGCTAGCTCGCACGAAACTCGCCCACAATCTTGACCCGGCGCAGCGACAGGGCGGCACAACCTTCGTG
CCCACGAACGTCGCTTTCAGACGGCTCGGAGAGAAGGCTAATCGGTTTCTTTTCTCGCGGCGGGGTGAGGGGTGC
CTGCGTCGCCATGGTGGGCATGCGCATGAGGGCGAGGGGAAGGGTGGACGTGGGGATGGACTAGAGGAGGACTAT
GCGAATGTGCGGCTTGTGACTTTGTTGAAGAGGGAGTTGAGGGTTGATGTTAAGAAGGGGTTTGGTGAGGTTGAT
ATGCGGGTTAATGGGTTTGGTAGAGTTGGACGAATGGATTTGTTGGCGAGGGATGGCGTGGTGCATGTTTTGGAT
CGGGTATTGATTCCCCCCAGGAAGATTCAGGATCAAAATGAAGATGAAGATGGGGAACTGATCATTGAGGAGCTT
GTAGGGAGATTGGATGGTTGCGTCTACGGGATGACTCGAGGAGAATTGTGA
Transcript >Pro_DTO377G3_2|g5915.t1
ATGCGTTCCACTTACCTTTTCTTATCTGTGGCAGCTTCATTGGCCTCGGCCTTTGTCATCCTAGATGAGAGTATC
CTCGCGGAGATAGTCTCTGAGACTCGACCAGCCACGAATGATCCATCTCAAGCAGATGCCGAGATGAGCCTGCTG
GGCATCTCCCCGGATGAACATAGAGGCTGGGGAAGAGACGGTGACTGGCGCGATGATGATGAATATCCGGAGCAT
GGCGATTGGCTTGGCTACGGGCGATGGCCCGGTGGTGATCGGCCCAGACATGGGGGATGGCCCGAACACGGAGAA
TGGCCTGGATACCGAGGTGATTGCGAAGACAGACACGACCGCGACGGAAGACCATGGGACAGATACCGACACCGT
CCACACCGGCCAATCGATGCTTGTCCAGGCCCGTTCTGCCACGCGGACAAGACGACATGGGAGCTCATCAGAGAA
AGCGAGCATACATCCCGACTCGCCGAGCTCATCGCCGACGACAAAGACCTGATTGATATCCTAAATGGCACGACG
GCAAACCACACCTTCTTCGCGCTGACGAACCGTGCCCTAGAGAGACTTCCACGGGGAAGAAATGGCCCCAGTCCG
AAGCTCATGTCCAAGTTGCTGCGGTATCATATCCTGCCCGGTCAATTTTCAATCGAGCATATTGCTGGCCACGGG
ACGCTACCGACGAAGCTGACAGAGCCAGCTCTGGAATCGACTCTACCACAGAGGATCGTTGTCCGAGAGCACCAG
AACGGAGTGATGTTGAACCGGAGGAGTAGGGTTGTGGCAGCCGACATGAAATCCAAAAACGGAATAATCCACATA
ATAACCAGTCCCCTCCACCCACCCCGAGAGACACGCACGATACTGCACCAAGCACCAACCGACTTCAGCACCTTC
ACATTGGCGCTAGCTCGCACGAAACTCGCCCACAATCTTGACCCGGCGCAGCGACAGGGCGGCACAACCTTCGTG
CCCACGAACGTCGCTTTCAGACGGCTCGGAGAGAAGGCTAATCGGTTTCTTTTCTCGCGGCGGGGTGAGGGGTGC
CTGCGTCGCCATGGTGGGCATGCGCATGAGGGCGAGGGGAAGGGTGGACGTGGGGATGGACTAGAGGAGGACTAT
GCGAATGTGCGGCTTGTGACTTTGTTGAAGAGGGAGTTGAGGGTTGATGTTAAGAAGGGGTTTGGTGAGGTTGAT
ATGCGGGTTAATGGGTTTGGTAGAGTTGGACGAATGGATTTGTTGGCGAGGGATGGCGTGGTGCATGTTTTGGAT
CGGGTATTGATTCCCCCCAGGAAGATTCAGGATCAAAATGAAGATGAAGATGGGGAACTGATCATTGAGGAGCTT
GTAGGGAGATTGGATGGTTGCGTCTACGGGATGACTCGAGGAGAATTGTGA
Gene >Pro_DTO377G3_2|g5915.t1
ATGCGTTCCACTTACCTTTTCTTATCTGTGGCAGCTTCATTGGCCTCGGCCTTTGTCATCCTAGATGAGAGTATC
CTCGCGGAGATAGTCTCTGAGACTCGACCAGCCACGAATGATCCATCTCAAGCAGATGCCGAGATGAGCCTGCTG
GGCATCTCCCCGGATGAACATAGAGGCTGGGGAAGAGACGGTGACTGGCGCGATGATGATGAATATCCGGAGCAT
GGCGATTGGCTTGGCTACGGGCGATGGCCCGGTGGTGATCGGCCCAGACATGGGGGATGGCCCGAACACGGAGAA
TGGCCTGGATACCGAGGTGATTGCGAAGACAGACACGACCGCGACGGAAGACCATGGGACAGATACCGACACCGT
CCACACCGGCCAATCGATGCTTGTCCAGGCCCGTTCTGCCACGCGGACAAGACGACATGGGAGCTCATCAGAGAA
AGCGAGCATACATCCCGACTCGCCGAGCTCATCGCCGACGACAAAGACCTGATTGATATCCTAAATGGCACGACG
GCAAACCACACCTTCTTCGCGCTGACGAACCGTGCCCTAGAGAGACTTCCACGGGGAAGAAATGGCCCCAGTCCG
AAGCTCATGTCCAAGTTGCTGCGGTATCATATCCTGCCCGGTCAATTTTCAATCGAGCATATTGCTGGCCACGGG
ACGCTACCGACGAAGCTGACAGAGCCAGCTCTGGAATCGACTCTACCACAGAGGATCGTTGTCCGAGAGCACCAG
AACGGAGTGATGTTGAACCGGAGGAGTAGGGTTGTGGCAGCCGACATGGTGAGTAAAGCATCAATTTATGGCACA
CATCGACAGATACTAACCTCACCTAAGAAATCCAAAAACGGAATAATCCACATAATAACCAGTCCCCTCCACCCA
CCCCGAGAGACACGCACGATACTGCACCAAGCACCAACCGACTTCAGCACCTTCACATTGGCGCTAGCTCGCACG
AAACTCGCCCACAATCTTGACCCGGCGCAGCGACAGGGCGGCACAACCTTCGTGCCCACGAACGTCGCTTTCAGA
CGGCTCGGAGAGAAGGCTAATCGGTTTCTTTTCTCGCGGCGGGGTGAGGGGTGCCTGCGTACGTTGATGCAGTAT
CATATTGTGCTAAATCAGACGTTTTACTCGGATGTCTTGTATAGTAGTCTTGGAACGTCCCATGGGTTGTTTTCA
GGTCGCCATGGTGGGCATGCGCATGAGGGCGAGGGGAAGGGTGGACGTGGGGATGGACTAGAGGAGGACTATGCG
AATGTGCGGCTTGTGACTTTGTTGAAGAGGGAGTTGAGGGTTGATGTTAAGAAGGGGTTTGGTGAGGTTGATATG
CGGGTTAATGGGTTTGGTAGAGTTGGACGAATGGATTTGTTGGCGAGGGATGGCGTGGTGCATGTTTTGGATCGG
GTATTGATTCCCCCCAGGAAGATTCAGGATCAAAATGAAGATGAAGATGGGGAACTGATCATTGAGGAGCTTGTA
GGGAGATTGGATGGTTGCGTCTACGGGATGACTCGAGGAGAATTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail