Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5910.t1
Gene name
Locationscaffold_15:124132..125046
Strand+
Gene length (bp)914
Transcript length (bp)795
Coding sequence length (bp)795
Protein length (aa) 265

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 8.5E-53 21 261
PF00106 adh_short short chain dehydrogenase 7.4E-50 13 210
PF08659 KR KR domain 3.9E-08 14 118
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.3E-05 15 121

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5910.t1
MADVMSLFSLSGKTALVTGGTRGIGQAMAFALAEAGADVILVQRDTSNTATKDEIINRIGRKAWIHVAELGDRKA
VKAIIPALLSQGLKPEILVNCAGIQRRHPAEKFPDEDWDEVLEINLSSVFIMCREFAAYLLARDASEFPQGRRGS
IINVGSLLTFQGGITVPAYAASKGGIGQLTKALSNDWVAKGINVNAIAPGYIATDMNTALINDADRNAGIMARIP
AGRWGNPEDFKGAVVYLASRASSYVSGEILTVDGGWMGR*
Coding >Pro_DTO377G3_2|g5910.t1
ATGGCAGACGTGATGTCCCTATTCTCCCTAAGCGGGAAAACCGCCCTCGTCACTGGTGGAACTCGAGGTATTGGC
CAAGCTATGGCCTTTGCCTTGGCTGAAGCCGGCGCCGATGTTATCTTGGTTCAGAGAGACACCAGCAACACAGCA
ACCAAAGATGAGATCATTAATCGCATCGGCCGTAAGGCATGGATCCATGTCGCCGAGCTCGGGGATCGGAAAGCC
GTCAAAGCAATCATCCCCGCATTGCTTAGCCAAGGACTGAAGCCGGAGATTTTGGTGAACTGTGCAGGGATCCAA
CGGCGACACCCGGCCGAAAAGTTCCCGGACGAGGACTGGGACGAGGTCTTGGAAATCAACCTGTCCTCCGTGTTC
ATCATGTGCCGAGAATTTGCCGCATACCTCCTGGCTCGCGACGCCTCTGAATTCCCACAGGGTCGCCGAGGCTCC
ATCATTAATGTCGGCTCTCTGCTCACCTTCCAGGGTGGAATTACAGTCCCCGCCTATGCGGCATCCAAGGGTGGC
ATTGGGCAGTTGACCAAAGCTCTATCGAATGACTGGGTCGCCAAGGGAATCAATGTCAACGCCATCGCGCCCGGT
TATATTGCCACCGATATGAACACCGCCCTTATCAACGATGCGGACCGCAACGCCGGTATCATGGCCCGTATTCCT
GCTGGCCGATGGGGAAACCCCGAGGATTTCAAGGGTGCCGTGGTGTATCTGGCTAGTCGGGCTAGCAGCTATGTT
TCTGGAGAGATCCTCACAGTTGACGGTGGATGGATGGGACGGTAA
Transcript >Pro_DTO377G3_2|g5910.t1
ATGGCAGACGTGATGTCCCTATTCTCCCTAAGCGGGAAAACCGCCCTCGTCACTGGTGGAACTCGAGGTATTGGC
CAAGCTATGGCCTTTGCCTTGGCTGAAGCCGGCGCCGATGTTATCTTGGTTCAGAGAGACACCAGCAACACAGCA
ACCAAAGATGAGATCATTAATCGCATCGGCCGTAAGGCATGGATCCATGTCGCCGAGCTCGGGGATCGGAAAGCC
GTCAAAGCAATCATCCCCGCATTGCTTAGCCAAGGACTGAAGCCGGAGATTTTGGTGAACTGTGCAGGGATCCAA
CGGCGACACCCGGCCGAAAAGTTCCCGGACGAGGACTGGGACGAGGTCTTGGAAATCAACCTGTCCTCCGTGTTC
ATCATGTGCCGAGAATTTGCCGCATACCTCCTGGCTCGCGACGCCTCTGAATTCCCACAGGGTCGCCGAGGCTCC
ATCATTAATGTCGGCTCTCTGCTCACCTTCCAGGGTGGAATTACAGTCCCCGCCTATGCGGCATCCAAGGGTGGC
ATTGGGCAGTTGACCAAAGCTCTATCGAATGACTGGGTCGCCAAGGGAATCAATGTCAACGCCATCGCGCCCGGT
TATATTGCCACCGATATGAACACCGCCCTTATCAACGATGCGGACCGCAACGCCGGTATCATGGCCCGTATTCCT
GCTGGCCGATGGGGAAACCCCGAGGATTTCAAGGGTGCCGTGGTGTATCTGGCTAGTCGGGCTAGCAGCTATGTT
TCTGGAGAGATCCTCACAGTTGACGGTGGATGGATGGGACGGTAA
Gene >Pro_DTO377G3_2|g5910.t1
ATGGCAGACGTGATGTCCCTATTCTCCCTAAGCGGGAAAACCGCCCTCGTCACTGGTGGAACTCGAGGTATTGGC
CAAGCTATGGCCTTTGCCTTGGCTGAAGCCGGCGCCGATGTTATCTTGGTTCAGGTGAGTTATTTGCACGCAAAG
ATTGGAGAGCACATGCTAATATACTAATAGAGAGACACCAGCAACACAGCAACCAAAGATGAGATCATTAATCGC
ATCGGCCGTAAGGCATGGATCCATGTCGCCGAGCTCGGGGATCGGAAAGCCGTCAAAGCAATCATCCCCGCATTG
CTTAGCCAAGGACTGAAGCCGGAGATTTTGGTGAACTGTGCAGGGATCCAACGGCGACACCCGGCCGAAAAGTTC
CCGGACGAGGACTGGGACGAGGTGAGTCGATAAAGCAATATAAATTGCCCCCTTGAAACACTATATCTAATTCGT
GGAATAATGTATAGGTCTTGGAAATCAACCTGTCCTCCGTGTTCATCATGTGCCGAGAATTTGCCGCATACCTCC
TGGCTCGCGACGCCTCTGAATTCCCACAGGGTCGCCGAGGCTCCATCATTAATGTCGGCTCTCTGCTCACCTTCC
AGGGTGGAATTACAGTCCCCGCCTATGCGGCATCCAAGGGTGGCATTGGGCAGTTGACCAAAGCTCTATCGAATG
ACTGGGTCGCCAAGGGAATCAATGTCAACGCCATCGCGCCCGGTTATATTGCCACCGATATGAACACCGCCCTTA
TCAACGATGCGGACCGCAACGCCGGTATCATGGCCCGTATTCCTGCTGGCCGATGGGGAAACCCCGAGGATTTCA
AGGGTGCCGTGGTGTATCTGGCTAGTCGGGCTAGCAGCTATGTTTCTGGAGAGATCCTCACAGTTGACGGTGGAT
GGATGGGACGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail