Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5910.t1
Gene name
Locationscaffold_15:124132..125046
Strand+
Gene length (bp)914
Transcript length (bp)795
Coding sequence length (bp)795
Protein length (aa) 265

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.4E-52 21 261
PF00106 adh_short short chain dehydrogenase 6.8E-50 13 210
PF08659 KR KR domain 3.6E-08 14 118
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.2E-05 15 121

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5910.t1
MADVMSLFSLSGKTALVTGGTRGIGQAMAFALAEAGADVILVQRDTSNTATKDEIINRIGRKAWIHVAELGDRKA
VKAIIPALLSQGLKPEILVNCAGIQRRHPAEKFPDEDWDEVLEINLSSVFIMCREFAAYLLARDASEFPQGRRGS
IINVGSLLTFQGGITVPAYAASKGGIGQLTKALSNDWVAKGINVNAIAPGYIATDMNTALINDADRNAGIMARIP
AGRWGNPEDFKGAVVYLASRASSYVSGEILTVDGGWMGR*
Coding >Pro_DTO377G3_2|g5910.t1
ATGGCAGACGTGATGTCCCTATTCTCCCTAAGCGGGAAAACCGCCCTCGTCACTGGTGGAACTCGAGGTATTGGC
CAAGCTATGGCCTTTGCCTTGGCTGAAGCCGGCGCCGATGTTATCTTGGTTCAGAGAGACACCAGCAACACAGCA
ACCAAAGATGAGATCATTAATCGCATCGGCCGTAAGGCATGGATCCATGTCGCCGAGCTCGGGGATCGGAAAGCC
GTCAAAGCAATCATCCCCGCATTGCTTAGCCAAGGACTGAAGCCGGAGATTTTGGTGAACTGTGCAGGGATCCAA
CGGCGACACCCGGCCGAAAAGTTCCCGGACGAGGACTGGGACGAGGTCTTGGAAATCAACCTGTCCTCCGTGTTC
ATCATGTGCCGAGAATTTGCCGCATACCTCCTGGCTCGCGACGCCTCTGAATTCCCACAGGGTCGCCGAGGCTCC
ATCATTAATGTCGGCTCTCTGCTCACCTTCCAGGGTGGAATTACAGTCCCCGCCTATGCGGCATCCAAGGGTGGC
ATTGGGCAGTTGACCAAAGCTCTATCGAATGACTGGGTCGCCAAGGGAATCAATGTCAACGCCATCGCGCCCGGT
TATATTGCCACCGATATGAACACCGCCCTTATCAACGATGCGGACCGCAACGCCGGTATCATGGCCCGTATTCCT
GCTGGCCGATGGGGAAACCCCGAGGATTTCAAGGGTGCCGTGGTGTATCTGGCTAGTCGGGCTAGCAGCTATGTT
TCTGGAGAGATCCTCACAGTTGACGGTGGATGGATGGGACGGTAA
Transcript >Pro_DTO377G3_2|g5910.t1
ATGGCAGACGTGATGTCCCTATTCTCCCTAAGCGGGAAAACCGCCCTCGTCACTGGTGGAACTCGAGGTATTGGC
CAAGCTATGGCCTTTGCCTTGGCTGAAGCCGGCGCCGATGTTATCTTGGTTCAGAGAGACACCAGCAACACAGCA
ACCAAAGATGAGATCATTAATCGCATCGGCCGTAAGGCATGGATCCATGTCGCCGAGCTCGGGGATCGGAAAGCC
GTCAAAGCAATCATCCCCGCATTGCTTAGCCAAGGACTGAAGCCGGAGATTTTGGTGAACTGTGCAGGGATCCAA
CGGCGACACCCGGCCGAAAAGTTCCCGGACGAGGACTGGGACGAGGTCTTGGAAATCAACCTGTCCTCCGTGTTC
ATCATGTGCCGAGAATTTGCCGCATACCTCCTGGCTCGCGACGCCTCTGAATTCCCACAGGGTCGCCGAGGCTCC
ATCATTAATGTCGGCTCTCTGCTCACCTTCCAGGGTGGAATTACAGTCCCCGCCTATGCGGCATCCAAGGGTGGC
ATTGGGCAGTTGACCAAAGCTCTATCGAATGACTGGGTCGCCAAGGGAATCAATGTCAACGCCATCGCGCCCGGT
TATATTGCCACCGATATGAACACCGCCCTTATCAACGATGCGGACCGCAACGCCGGTATCATGGCCCGTATTCCT
GCTGGCCGATGGGGAAACCCCGAGGATTTCAAGGGTGCCGTGGTGTATCTGGCTAGTCGGGCTAGCAGCTATGTT
TCTGGAGAGATCCTCACAGTTGACGGTGGATGGATGGGACGGTAA
Gene >Pro_DTO377G3_2|g5910.t1
ATGGCAGACGTGATGTCCCTATTCTCCCTAAGCGGGAAAACCGCCCTCGTCACTGGTGGAACTCGAGGTATTGGC
CAAGCTATGGCCTTTGCCTTGGCTGAAGCCGGCGCCGATGTTATCTTGGTTCAGGTGAGTTATTTGCACGCAAAG
ATTGGAGAGCACATGCTAATATACTAATAGAGAGACACCAGCAACACAGCAACCAAAGATGAGATCATTAATCGC
ATCGGCCGTAAGGCATGGATCCATGTCGCCGAGCTCGGGGATCGGAAAGCCGTCAAAGCAATCATCCCCGCATTG
CTTAGCCAAGGACTGAAGCCGGAGATTTTGGTGAACTGTGCAGGGATCCAACGGCGACACCCGGCCGAAAAGTTC
CCGGACGAGGACTGGGACGAGGTGAGTCGATAAAGCAATATAAATTGCCCCCTTGAAACACTATATCTAATTCGT
GGAATAATGTATAGGTCTTGGAAATCAACCTGTCCTCCGTGTTCATCATGTGCCGAGAATTTGCCGCATACCTCC
TGGCTCGCGACGCCTCTGAATTCCCACAGGGTCGCCGAGGCTCCATCATTAATGTCGGCTCTCTGCTCACCTTCC
AGGGTGGAATTACAGTCCCCGCCTATGCGGCATCCAAGGGTGGCATTGGGCAGTTGACCAAAGCTCTATCGAATG
ACTGGGTCGCCAAGGGAATCAATGTCAACGCCATCGCGCCCGGTTATATTGCCACCGATATGAACACCGCCCTTA
TCAACGATGCGGACCGCAACGCCGGTATCATGGCCCGTATTCCTGCTGGCCGATGGGGAAACCCCGAGGATTTCA
AGGGTGCCGTGGTGTATCTGGCTAGTCGGGCTAGCAGCTATGTTTCTGGAGAGATCCTCACAGTTGACGGTGGAT
GGATGGGACGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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