Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g591.t1
Gene name
Locationscaffold_01:1520826..1522624
Strand+
Gene length (bp)1798
Transcript length (bp)1689
Coding sequence length (bp)1689
Protein length (aa) 563

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01743 PolyA_pol Poly A polymerase head domain 2.2E-21 79 232
PF12627 PolyA_pol_RNAbd Probable RNA and SrmB- binding site of polymerase A 9.9E-08 259 319

GO

GO Term Description Terminal node
GO:0016779 nucleotidyltransferase activity Yes
GO:0003723 RNA binding Yes
GO:0006396 RNA processing Yes
GO:0043170 macromolecule metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0016740 transferase activity No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0003676 nucleic acid binding No
GO:0006725 cellular aromatic compound metabolic process No
GO:0005488 binding No
GO:0016070 RNA metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g591.t1
MRNPESDPDFSERVSKRRRISSPTREGSYATMSSAMPTIELTPLESTLRTLLLDVAQYITEQKIANGGSTAKDHS
ETVLRFTGGWVRDKLLGVESHDIDVGISNMTGYQFGMALKDYLDVPENLEIYKKGLPNGEMHDAIVSLHKIEANP
EKSKHLETVTTKIFGLDIDLVNLRKETYTDDSRNPQMEFGTAVEDALRRDATINALFYNLNESRLEDLTERGLND
MKKKIIRCPMEPYQTFKDDPLRVLRLIRFASRLGYQIEPETEAAMQIEDIREALKLKISKERVGTELEKMLRGPD
PRGALQFIDRLHLFTTIFANHQDEVKADTSTWPFAYNTLARLLHPEAGDSDELQAVTKRIREILFRDKTTIYYAW
MIATFAPWTSIPGRTGKGSKPLPPRAVEVGRDGLRSDNKTLNALRAAALHYKETIATKSALLANKMSGTPAEIRQ
CIGLQMRSWNKDWKLCILLAILQENMALRDFAEVAREYDQFLAYIVENDLEGVCDLKPIVNGDEIMKSLGTKKGP
WMSKAVSMALEWQLLHPDIIDKETVLEEIAGRRAEFE*
Coding >Pro_DTO377G3_2|g591.t1
ATGCGCAACCCCGAATCGGACCCGGACTTCTCAGAACGAGTCAGCAAGAGACGACGCATTTCTTCCCCGACGCGG
GAAGGCTCATACGCAACCATGAGCTCCGCCATGCCTACCATCGAGCTCACTCCACTTGAAAGCACCTTACGAACC
CTACTCCTCGATGTCGCACAATACATCACCGAGCAGAAAATTGCCAATGGAGGCAGCACTGCGAAAGATCACTCC
GAGACTGTCTTGCGCTTCACGGGCGGGTGGGTCAGGGACAAGCTGCTTGGAGTCGAGAGCCATGATATCGACGTG
GGTATTAGCAACATGACAGGATACCAGTTTGGTATGGCCCTGAAAGACTACCTGGATGTTCCGGAGAATCTTGAA
ATATACAAGAAAGGCCTACCGAATGGGGAAATGCACGACGCCATTGTGAGCCTTCACAAAATCGAGGCCAACCCA
GAGAAGTCGAAGCACCTCGAAACCGTCACAACCAAGATCTTCGGCCTGGATATTGATTTGGTCAATCTACGGAAG
GAAACATACACAGATGACAGTCGAAATCCTCAGATGGAGTTTGGCACCGCTGTCGAAGACGCTTTGAGACGCGAT
GCAACTATCAATGCGCTTTTCTACAATCTAAATGAGTCACGGCTAGAGGATCTCACCGAGAGAGGACTGAACGAC
ATGAAGAAAAAGATTATCCGATGCCCAATGGAACCATATCAAACCTTCAAAGATGACCCACTGCGTGTGCTTCGG
TTGATCCGCTTTGCGAGCAGACTGGGATACCAAATCGAGCCCGAAACCGAAGCCGCTATGCAGATTGAAGACATC
CGCGAGGCATTGAAACTCAAAATCAGTAAAGAGCGAGTGGGAACCGAGCTAGAAAAGATGTTGCGTGGTCCCGAC
CCTCGCGGTGCATTGCAGTTCATCGATCGACTCCATCTATTCACCACTATCTTCGCTAATCATCAGGACGAAGTT
AAGGCTGATACATCGACATGGCCTTTTGCATACAATACTTTGGCGCGATTGCTGCATCCAGAGGCTGGTGACAGC
GATGAACTTCAGGCAGTTACCAAGCGCATTCGTGAGATCTTATTCCGCGACAAAACTACCATATACTACGCCTGG
ATGATTGCCACATTTGCTCCCTGGACTTCAATTCCTGGCCGCACCGGGAAAGGATCCAAGCCCTTGCCCCCGCGA
GCGGTTGAGGTTGGAAGAGATGGCCTTCGCAGTGACAACAAGACGCTCAATGCGCTCCGCGCTGCTGCTCTGCAT
TACAAGGAAACAATTGCGACAAAATCCGCACTTCTCGCGAACAAGATGAGTGGAACCCCGGCAGAAATCCGACAG
TGCATTGGATTGCAAATGCGGTCGTGGAATAAGGACTGGAAGCTTTGCATTCTCCTGGCTATTCTGCAAGAAAAT
ATGGCGCTCCGTGACTTTGCAGAAGTGGCCCGTGAATACGACCAGTTCCTTGCGTACATTGTAGAAAACGATCTG
GAGGGTGTTTGTGACCTGAAGCCCATTGTAAATGGTGACGAAATTATGAAAAGTCTAGGGACTAAAAAGGGACCT
TGGATGTCCAAGGCAGTCAGCATGGCCCTTGAATGGCAACTTCTTCATCCTGATATTATCGACAAGGAAACGGTG
CTGGAGGAGATCGCGGGTCGACGAGCAGAATTCGAATGA
Transcript >Pro_DTO377G3_2|g591.t1
ATGCGCAACCCCGAATCGGACCCGGACTTCTCAGAACGAGTCAGCAAGAGACGACGCATTTCTTCCCCGACGCGG
GAAGGCTCATACGCAACCATGAGCTCCGCCATGCCTACCATCGAGCTCACTCCACTTGAAAGCACCTTACGAACC
CTACTCCTCGATGTCGCACAATACATCACCGAGCAGAAAATTGCCAATGGAGGCAGCACTGCGAAAGATCACTCC
GAGACTGTCTTGCGCTTCACGGGCGGGTGGGTCAGGGACAAGCTGCTTGGAGTCGAGAGCCATGATATCGACGTG
GGTATTAGCAACATGACAGGATACCAGTTTGGTATGGCCCTGAAAGACTACCTGGATGTTCCGGAGAATCTTGAA
ATATACAAGAAAGGCCTACCGAATGGGGAAATGCACGACGCCATTGTGAGCCTTCACAAAATCGAGGCCAACCCA
GAGAAGTCGAAGCACCTCGAAACCGTCACAACCAAGATCTTCGGCCTGGATATTGATTTGGTCAATCTACGGAAG
GAAACATACACAGATGACAGTCGAAATCCTCAGATGGAGTTTGGCACCGCTGTCGAAGACGCTTTGAGACGCGAT
GCAACTATCAATGCGCTTTTCTACAATCTAAATGAGTCACGGCTAGAGGATCTCACCGAGAGAGGACTGAACGAC
ATGAAGAAAAAGATTATCCGATGCCCAATGGAACCATATCAAACCTTCAAAGATGACCCACTGCGTGTGCTTCGG
TTGATCCGCTTTGCGAGCAGACTGGGATACCAAATCGAGCCCGAAACCGAAGCCGCTATGCAGATTGAAGACATC
CGCGAGGCATTGAAACTCAAAATCAGTAAAGAGCGAGTGGGAACCGAGCTAGAAAAGATGTTGCGTGGTCCCGAC
CCTCGCGGTGCATTGCAGTTCATCGATCGACTCCATCTATTCACCACTATCTTCGCTAATCATCAGGACGAAGTT
AAGGCTGATACATCGACATGGCCTTTTGCATACAATACTTTGGCGCGATTGCTGCATCCAGAGGCTGGTGACAGC
GATGAACTTCAGGCAGTTACCAAGCGCATTCGTGAGATCTTATTCCGCGACAAAACTACCATATACTACGCCTGG
ATGATTGCCACATTTGCTCCCTGGACTTCAATTCCTGGCCGCACCGGGAAAGGATCCAAGCCCTTGCCCCCGCGA
GCGGTTGAGGTTGGAAGAGATGGCCTTCGCAGTGACAACAAGACGCTCAATGCGCTCCGCGCTGCTGCTCTGCAT
TACAAGGAAACAATTGCGACAAAATCCGCACTTCTCGCGAACAAGATGAGTGGAACCCCGGCAGAAATCCGACAG
TGCATTGGATTGCAAATGCGGTCGTGGAATAAGGACTGGAAGCTTTGCATTCTCCTGGCTATTCTGCAAGAAAAT
ATGGCGCTCCGTGACTTTGCAGAAGTGGCCCGTGAATACGACCAGTTCCTTGCGTACATTGTAGAAAACGATCTG
GAGGGTGTTTGTGACCTGAAGCCCATTGTAAATGGTGACGAAATTATGAAAAGTCTAGGGACTAAAAAGGGACCT
TGGATGTCCAAGGCAGTCAGCATGGCCCTTGAATGGCAACTTCTTCATCCTGATATTATCGACAAGGAAACGGTG
CTGGAGGAGATCGCGGGTCGACGAGCAGAATTCGAATGA
Gene >Pro_DTO377G3_2|g591.t1
ATGCGCAACCCCGAATCGGACCCGGACTTCTCAGAACGAGTCAGCAAGAGACGACGCATTTCTTCCCCGACGCGG
GAAGGCTCATACGCAACCATGAGCTCCGCCATGCCTACCATCGAGCTCACTCCACTTGAAAGCACCTTACGAACC
CTACTCCTCGATGTCGCACAATACATCACCGAGCAGAAAATTGCCAATGGAGGCAGCACTGCGAAAGATCACTCC
GAGACTGTCTTGCGCTTCACGGGCGGGTGGGTCAGGGACAAGCTGCTTGGAGTCGAGAGCCATGATATCGACGTG
GGTATTAGCAACATGACAGGATACCAGTTTGGTATGGCCCTGAAAGACTACCTGGATGTTCCGGAGAATCTTGAA
ATATACAAGAAAGGCCTACCGAATGGGGAAATGCACGACGCCATTGTGAGCCTTCACAAAATCGAGGCCAACCCA
GAGAAGTCGAAGCACCTCGAAACCGTCACAACCAAGATCTTCGGCCTGGATATTGATTTGGTCAATCTACGGAAG
GAAACATACACAGATGACAGTCGAAATCCTCAGATGGAGTTTGGCACCGCTGTCGAAGACGCTTTGAGACGCGAT
GCAACTATCAATGCGCTTTTCTACAATCTAAATGAGTCACGGCTAGAGGATCTCACCGAGAGAGGACTGAACGAC
ATGAAGAAAAAGATTATCCGATGCCCAATGGAACCATATCAAACCTTCAAAGATGACCCACTGCGTGTGCTTCGG
TTGATCCGCTTTGCGAGCAGACTGGGATACCAAATCGAGCCCGAAACCGAAGCCGCTATGCAGATTGAAGACATC
CGCGAGGCATTGAAACTCAAAATCAGTAAAGAGCGAGTGGGAACCGAGCTAGAAAAGATGTTGCGTGGTGAGTCA
TTGCACGTGTCCGGTATTCTATATTTCTAACAAGTCATATCTCATATCTTAGGTCCCGACCCTCGCGGTGCATTG
CAGTTCATCGATCGACTCCATCTATTCACCACTATCTTCGCTAATCATCAGGACGAAGTTAAGGCTGATACATCG
ACATGGCCTTTTGCATACAATACTTTGGCGCGATTGCTGCATCCAGAGGCTGGTGACAGCGATGAACTTCAGGCA
GTTACCAAGCGCATTCGTGAGATCTTATTCCGCGACAAAACTACCATATACTACGCCTGGATGATTGCCACATTT
GCTCCCTGGACTTCAATTCCTGGCCGCACCGGGAAAGGATCCAAGCCCTTGCCCCCGCGAGCGGTTGAGGTTGGA
AGAGATGGCCTTCGCAGTGACAACAAGACGCTCAATGCGCTCCGCGCTGCTGCTCTGCATTACAAGGAAACAATT
GCGACAAAATCCGCACTTCTCGCGAACAAGATGAGTGGAACCCCGGCAGAAATCCGACAGTGCATTGGATTGCAA
ATGCGGTCGTGGAATAAGGACTGGAAGCTTTGCATTCTCCTGGCTATTCTGCAAGAAAATATGGCGCTCCGTGAC
TTTGCAGAAGGTAAGATCCGTTCCCTTGATGATAACATTCCAATTCTTACAATGTGTAGTGGCCCGTGAATACGA
CCAGTTCCTTGCGTACATTGTAGAAAACGATCTGGAGGGTGTTTGTGACCTGAAGCCCATTGTAAATGGTGACGA
AATTATGAAAAGTCTAGGGACTAAAAAGGGACCTTGGATGTCCAAGGCAGTCAGCATGGCCCTTGAATGGCAACT
TCTTCATCCTGATATTATCGACAAGGAAACGGTGCTGGAGGAGATCGCGGGTCGACGAGCAGAATTCGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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