Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5908.t1
Gene name
Locationscaffold_15:120168..121044
Strand-
Gene length (bp)876
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.5E-45 15 251
PF00106 adh_short short chain dehydrogenase 8.8E-44 10 203
PF08659 KR KR domain 7.0E-12 12 176
PF01370 Epimerase NAD dependent epimerase/dehydratase family 2.3E-05 11 153
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 5.7E-05 12 107

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5908.t1
MSLNEIQGRLALITGASGGIGSACAHQLAQHGVHLALTYASNLTAMNALVTDLQSKYADKKLHISIHKVDVGSAD
DIETMFQQIDTEHGHRPDILISNAGHGKRIPQIWDCSLEEFDHTIHVNLRASFILVKGVVEHMKSQNWGRIVFMS
SIAAQGGGINGCHYAASKGGLTGMMKNLSTRLAEFNISVNDVAPAMIGDTGMIPNAAAIPEVAAGIPLGRLGTPE
ETANVVTMLVKTGYMTGQSLLLAGGLK*
Coding >Pro_DTO377G3_2|g5908.t1
ATGTCACTTAACGAGATCCAGGGTCGGCTTGCGCTCATTACCGGCGCATCGGGAGGAATTGGATCTGCCTGTGCA
CACCAGCTTGCTCAACATGGAGTGCATCTCGCCCTGACATACGCGAGCAACCTGACCGCCATGAACGCACTGGTG
ACCGACCTGCAGAGCAAATACGCAGATAAAAAGCTCCATATCTCAATTCATAAAGTGGACGTAGGTTCCGCTGAC
GACATCGAGACGATGTTCCAGCAAATCGACACCGAGCACGGCCACCGACCTGATATCCTGATCTCGAACGCTGGG
CACGGGAAGCGGATTCCCCAAATCTGGGACTGCTCTCTCGAAGAGTTCGATCATACTATACATGTCAACTTGCGC
GCTTCATTCATTCTCGTCAAGGGGGTGGTGGAGCATATGAAGAGCCAGAATTGGGGGCGTATTGTGTTTATGTCC
TCGATTGCTGCGCAAGGTGGTGGAATCAATGGATGTCATTACGCTGCCTCTAAAGGTGGTCTGACAGGCATGATG
AAGAACCTTTCTACCCGACTGGCTGAATTCAATATCAGTGTTAACGATGTGGCGCCTGCCATGATTGGTGACACT
GGTATGATTCCTAACGCTGCGGCTATCCCTGAGGTGGCAGCTGGGATTCCGCTTGGTCGCCTCGGGACTCCCGAG
GAAACGGCCAATGTTGTGACTATGCTTGTGAAAACAGGCTACATGACGGGTCAGAGTCTTTTGCTGGCTGGAGGG
TTGAAATGA
Transcript >Pro_DTO377G3_2|g5908.t1
ATGTCACTTAACGAGATCCAGGGTCGGCTTGCGCTCATTACCGGCGCATCGGGAGGAATTGGATCTGCCTGTGCA
CACCAGCTTGCTCAACATGGAGTGCATCTCGCCCTGACATACGCGAGCAACCTGACCGCCATGAACGCACTGGTG
ACCGACCTGCAGAGCAAATACGCAGATAAAAAGCTCCATATCTCAATTCATAAAGTGGACGTAGGTTCCGCTGAC
GACATCGAGACGATGTTCCAGCAAATCGACACCGAGCACGGCCACCGACCTGATATCCTGATCTCGAACGCTGGG
CACGGGAAGCGGATTCCCCAAATCTGGGACTGCTCTCTCGAAGAGTTCGATCATACTATACATGTCAACTTGCGC
GCTTCATTCATTCTCGTCAAGGGGGTGGTGGAGCATATGAAGAGCCAGAATTGGGGGCGTATTGTGTTTATGTCC
TCGATTGCTGCGCAAGGTGGTGGAATCAATGGATGTCATTACGCTGCCTCTAAAGGTGGTCTGACAGGCATGATG
AAGAACCTTTCTACCCGACTGGCTGAATTCAATATCAGTGTTAACGATGTGGCGCCTGCCATGATTGGTGACACT
GGTATGATTCCTAACGCTGCGGCTATCCCTGAGGTGGCAGCTGGGATTCCGCTTGGTCGCCTCGGGACTCCCGAG
GAAACGGCCAATGTTGTGACTATGCTTGTGAAAACAGGCTACATGACGGGTCAGAGTCTTTTGCTGGCTGGAGGG
TTGAAATGA
Gene >Pro_DTO377G3_2|g5908.t1
ATGTCACTTAACGAGATCCAGGGTCGGCTTGCGCTCATTACCGGCGCATCGGGAGGGTAAGCTATTCCAACTCAT
ATCACCCCAATACGGCGAATGAAGAACTGACAATTAATTCTATAGAATTGGATCTGCCTGTGCACACCAGCTTGC
TCAACATGGAGTGCATCTCGCCCTGACATACGCGAGCAACCTGACCGCCATGAACGCACTGGTGACCGACCTGCA
GAGCAAATACGCAGATAAAAAGCTCCATATCTCAATTCATAAAGTGGACGTAGGTTCCGCTGACGACATCGAGAC
GATGTTCCAGCAAATCGACACCGAGCACGGCCACCGACCTGATATCCTGATCTCGAACGCTGGGCACGGGAAGCG
GATTCCCCAAATCTGGGACTGCTCTCTCGAAGAGTTCGATCATACTATACATGTCAACTTGCGCGCTTCATTCAT
TCTCGTCAAGGGGGTGGTGGAGCATATGAAGAGCCAGAATTGGGGGCGTATTGTGTTTATGTCCTCGATTGCTGC
GCAAGGTGGTGGAATCAATGGATGTCGTATGTATAGCTTCTTTCCTTCTCTGAGGAATACCAAACTGACTCTCTT
TTAGATTACGCTGCCTCTAAAGGTGGTCTGACAGGCATGATGAAGAACCTTTCTACCCGACTGGCTGAATTCAAT
ATCAGTGTTAACGATGTGGCGCCTGCCATGATTGGTGACACTGGTATGATTCCTAACGCTGCGGCTATCCCTGAG
GTGGCAGCTGGGATTCCGCTTGGTCGCCTCGGGACTCCCGAGGAAACGGCCAATGTTGTGACTATGCTTGTGAAA
ACAGGCTACATGACGGGTCAGAGTCTTTTGCTGGCTGGAGGGTTGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail