Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5908.t1
Gene name
Locationscaffold_15:120168..121044
Strand-
Gene length (bp)876
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.2E-45 15 251
PF00106 adh_short short chain dehydrogenase 8.0E-44 10 203
PF08659 KR KR domain 3.5E-12 12 176
PF01370 Epimerase NAD dependent epimerase/dehydratase family 2.1E-05 11 153
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 5.7E-05 12 107

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5908.t1
MSLNEIQGRLALITGASGGIGSACAHQLAQHGVHLALTYASNLTAMNALVTDLQSKYADKKLHISIHKVDVGSAD
DIETMFQQIDTEHGHRPDILISNAGHGKRIPQIWDCSLEEFDHTIHVNLRASFILVKGVVEHMKSQNWGRIVFMS
SIAAQGGGINGCHYAASKGGLTGMMKNLSTRLAEFNISVNDVAPAMIGDTGMIPNAAAIPEVAAGIPLGRLGTPE
ETANVVTMLVKTGYMTGQSLLLAGGLK*
Coding >Pro_DTO377G3_2|g5908.t1
ATGTCACTTAACGAGATCCAGGGTCGGCTTGCGCTCATTACCGGCGCATCGGGAGGAATTGGATCTGCCTGTGCA
CACCAGCTTGCTCAACATGGAGTGCATCTCGCCCTGACATACGCGAGCAACCTGACCGCCATGAACGCACTGGTG
ACCGACCTGCAGAGCAAATACGCAGATAAAAAGCTCCATATCTCAATTCATAAAGTGGACGTAGGTTCCGCTGAC
GACATCGAGACGATGTTCCAGCAAATCGACACCGAGCACGGCCACCGACCTGATATCCTGATCTCGAACGCTGGG
CACGGGAAGCGGATTCCCCAAATCTGGGACTGCTCTCTCGAAGAGTTCGATCATACTATACATGTCAACTTGCGC
GCTTCATTCATTCTCGTCAAGGGGGTGGTGGAGCATATGAAGAGCCAGAATTGGGGGCGTATTGTGTTTATGTCC
TCGATTGCTGCGCAAGGTGGTGGAATCAATGGATGTCATTACGCTGCCTCTAAAGGTGGTCTGACAGGCATGATG
AAGAACCTTTCTACCCGACTGGCTGAATTCAATATCAGTGTTAACGATGTGGCGCCTGCCATGATTGGTGACACT
GGTATGATTCCTAACGCTGCGGCTATCCCTGAGGTGGCAGCTGGGATTCCGCTTGGTCGCCTCGGGACTCCCGAG
GAAACGGCCAATGTTGTGACTATGCTTGTGAAAACAGGCTACATGACGGGTCAGAGTCTTTTGCTGGCTGGAGGG
TTGAAATGA
Transcript >Pro_DTO377G3_2|g5908.t1
ATGTCACTTAACGAGATCCAGGGTCGGCTTGCGCTCATTACCGGCGCATCGGGAGGAATTGGATCTGCCTGTGCA
CACCAGCTTGCTCAACATGGAGTGCATCTCGCCCTGACATACGCGAGCAACCTGACCGCCATGAACGCACTGGTG
ACCGACCTGCAGAGCAAATACGCAGATAAAAAGCTCCATATCTCAATTCATAAAGTGGACGTAGGTTCCGCTGAC
GACATCGAGACGATGTTCCAGCAAATCGACACCGAGCACGGCCACCGACCTGATATCCTGATCTCGAACGCTGGG
CACGGGAAGCGGATTCCCCAAATCTGGGACTGCTCTCTCGAAGAGTTCGATCATACTATACATGTCAACTTGCGC
GCTTCATTCATTCTCGTCAAGGGGGTGGTGGAGCATATGAAGAGCCAGAATTGGGGGCGTATTGTGTTTATGTCC
TCGATTGCTGCGCAAGGTGGTGGAATCAATGGATGTCATTACGCTGCCTCTAAAGGTGGTCTGACAGGCATGATG
AAGAACCTTTCTACCCGACTGGCTGAATTCAATATCAGTGTTAACGATGTGGCGCCTGCCATGATTGGTGACACT
GGTATGATTCCTAACGCTGCGGCTATCCCTGAGGTGGCAGCTGGGATTCCGCTTGGTCGCCTCGGGACTCCCGAG
GAAACGGCCAATGTTGTGACTATGCTTGTGAAAACAGGCTACATGACGGGTCAGAGTCTTTTGCTGGCTGGAGGG
TTGAAATGA
Gene >Pro_DTO377G3_2|g5908.t1
ATGTCACTTAACGAGATCCAGGGTCGGCTTGCGCTCATTACCGGCGCATCGGGAGGGTAAGCTATTCCAACTCAT
ATCACCCCAATACGGCGAATGAAGAACTGACAATTAATTCTATAGAATTGGATCTGCCTGTGCACACCAGCTTGC
TCAACATGGAGTGCATCTCGCCCTGACATACGCGAGCAACCTGACCGCCATGAACGCACTGGTGACCGACCTGCA
GAGCAAATACGCAGATAAAAAGCTCCATATCTCAATTCATAAAGTGGACGTAGGTTCCGCTGACGACATCGAGAC
GATGTTCCAGCAAATCGACACCGAGCACGGCCACCGACCTGATATCCTGATCTCGAACGCTGGGCACGGGAAGCG
GATTCCCCAAATCTGGGACTGCTCTCTCGAAGAGTTCGATCATACTATACATGTCAACTTGCGCGCTTCATTCAT
TCTCGTCAAGGGGGTGGTGGAGCATATGAAGAGCCAGAATTGGGGGCGTATTGTGTTTATGTCCTCGATTGCTGC
GCAAGGTGGTGGAATCAATGGATGTCGTATGTATAGCTTCTTTCCTTCTCTGAGGAATACCAAACTGACTCTCTT
TTAGATTACGCTGCCTCTAAAGGTGGTCTGACAGGCATGATGAAGAACCTTTCTACCCGACTGGCTGAATTCAAT
ATCAGTGTTAACGATGTGGCGCCTGCCATGATTGGTGACACTGGTATGATTCCTAACGCTGCGGCTATCCCTGAG
GTGGCAGCTGGGATTCCGCTTGGTCGCCTCGGGACTCCCGAGGAAACGGCCAATGTTGTGACTATGCTTGTGAAA
ACAGGCTACATGACGGGTCAGAGTCTTTTGCTGGCTGGAGGGTTGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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