Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5900.t1
Gene name
Locationscaffold_15:106152..107112
Strand-
Gene length (bp)960
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03067 LPMO_10 Lytic polysaccharide mono-oxygenase, cellulose-degrading 2.2E-11 20 189

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5900.t1
MKSFTPALAFASIISLVNAHGFVTSPAAREPGTAMGAACGQQVLSNQESDKYGNIQGELQVAATQTDYNAAECDI
WLCKGYKFADNQANIQSYTAGEEVAFTVDIRAPHTGVANVSVVQTSSNTVIGSPLISWDVYASVATGVTANETSF
SVTIPDDLGSQCATAGDCVLQWYWYAESIDQTYESCIDFTLGGSGSSAVASTSSTSSTSSISSTSSSTVVAATTT
PTAAVVETPTTAAVQSTTPSITVAAQPTTSTTTVAAQPTTFATTVRQSTTSAAAQVPTTSADASATTSAVSIPTG
SAADVLSWIESLLGNLVGN*
Coding >Pro_DTO377G3_2|g5900.t1
ATGAAGTCTTTCACCCCCGCCCTGGCTTTCGCCAGTATCATCTCCTTGGTCAACGCCCATGGCTTCGTCACCAGC
CCGGCAGCCCGCGAGCCCGGTACTGCAATGGGAGCCGCGTGTGGTCAGCAAGTTCTGTCCAACCAGGAGTCCGAC
AAGTACGGCAACATCCAAGGCGAGCTACAAGTTGCCGCCACCCAGACCGACTACAACGCCGCCGAGTGTGACATC
TGGCTGTGCAAGGGCTACAAGTTCGCCGACAACCAGGCCAACATCCAGTCGTACACGGCAGGAGAGGAAGTCGCC
TTCACTGTTGATATTCGCGCCCCGCACACCGGTGTGGCCAATGTCTCTGTCGTCCAGACTTCTTCCAACACTGTC
ATTGGCAGTCCCCTAATCTCCTGGGATGTCTATGCGTCCGTAGCCACCGGCGTCACTGCCAACGAGACCAGCTTC
AGCGTCACTATCCCCGACGATCTTGGAAGCCAGTGTGCCACCGCCGGTGACTGTGTGTTGCAGTGGTACTGGTAC
GCAGAATCAATCGACCAGACCTACGAGTCGTGTATCGACTTCACTCTCGGTGGATCTGGTAGCTCGGCGGTTGCG
TCCACCTCGTCCACCTCATCAACCTCGTCGATCTCGTCGACCTCCAGCTCTACGGTGGTTGCCGCCACTACCACC
CCAACTGCTGCTGTTGTTGAAACCCCTACCACGGCCGCTGTTCAGTCTACAACGCCCTCCATCACAGTTGCTGCT
CAGCCTACTACTTCCACCACCACGGTTGCGGCCCAGCCTACTACTTTCGCCACCACTGTCCGTCAATCGACTACT
TCTGCTGCGGCGCAAGTCCCTACTACCAGCGCTGATGCCTCCGCTACTACCTCGGCCGTATCTATCCCCACTGGT
AGTGCTGCAGATGTCCTATCCTGGATTGAGTCCTTGTTGGGCAACTTGGTGGGTAATTAA
Transcript >Pro_DTO377G3_2|g5900.t1
ATGAAGTCTTTCACCCCCGCCCTGGCTTTCGCCAGTATCATCTCCTTGGTCAACGCCCATGGCTTCGTCACCAGC
CCGGCAGCCCGCGAGCCCGGTACTGCAATGGGAGCCGCGTGTGGTCAGCAAGTTCTGTCCAACCAGGAGTCCGAC
AAGTACGGCAACATCCAAGGCGAGCTACAAGTTGCCGCCACCCAGACCGACTACAACGCCGCCGAGTGTGACATC
TGGCTGTGCAAGGGCTACAAGTTCGCCGACAACCAGGCCAACATCCAGTCGTACACGGCAGGAGAGGAAGTCGCC
TTCACTGTTGATATTCGCGCCCCGCACACCGGTGTGGCCAATGTCTCTGTCGTCCAGACTTCTTCCAACACTGTC
ATTGGCAGTCCCCTAATCTCCTGGGATGTCTATGCGTCCGTAGCCACCGGCGTCACTGCCAACGAGACCAGCTTC
AGCGTCACTATCCCCGACGATCTTGGAAGCCAGTGTGCCACCGCCGGTGACTGTGTGTTGCAGTGGTACTGGTAC
GCAGAATCAATCGACCAGACCTACGAGTCGTGTATCGACTTCACTCTCGGTGGATCTGGTAGCTCGGCGGTTGCG
TCCACCTCGTCCACCTCATCAACCTCGTCGATCTCGTCGACCTCCAGCTCTACGGTGGTTGCCGCCACTACCACC
CCAACTGCTGCTGTTGTTGAAACCCCTACCACGGCCGCTGTTCAGTCTACAACGCCCTCCATCACAGTTGCTGCT
CAGCCTACTACTTCCACCACCACGGTTGCGGCCCAGCCTACTACTTTCGCCACCACTGTCCGTCAATCGACTACT
TCTGCTGCGGCGCAAGTCCCTACTACCAGCGCTGATGCCTCCGCTACTACCTCGGCCGTATCTATCCCCACTGGT
AGTGCTGCAGATGTCCTATCCTGGATTGAGTCCTTGTTGGGCAACTTGGTGGGTAATTAA
Gene >Pro_DTO377G3_2|g5900.t1
ATGAAGTCTTTCACCCCCGCCCTGGCTTTCGCCAGTATCATCTCCTTGGTCAACGCCCATGGCTTCGTCACCAGC
CCGGCAGCCCGCGAGCCCGGTACTGCAATGGGAGCCGCGTGTGGTCAGCAAGTTCTGTCCAACCAGGAGTCCGAC
AAGTACGGCAACATCCAAGGCGAGCTACAAGTTGCCGCCACCCAGACCGACTACAACGCCGCCGAGTGTGACATC
TGGCTGTGCAAGGGCTACAAGTTCGCCGACAACCAGGCCAACATCCAGTCGTACACGGCAGGAGAGGAAGTCGCC
TTCACTGTTGATATTCGCGCCCCGCACACCGGTGTGGCCAATGTCTCTGTCGTCCAGACTTCTTCCAACACTGTC
ATTGGCAGTCCCCTAATCTCCTGGGATGTCTATGCGTCCGTAGCCACCGGCGTCACTGCCAACGAGACCAGCTTC
AGCGTCACTATCCCCGACGATCTTGGAAGCCAGTGTGCCACCGCCGGTGACTGTGTGTTGCAGTGGTACTGGTAC
GCAGAATCAATCGACCAGACCTACGAGTCGTGTATCGACTTCACTCTCGGTGGATCTGGTAGCTCGGCGGTTGCG
TCCACCTCGTCCACCTCATCAACCTCGTCGATCTCGTCGACCTCCAGCTCTACGGTGGTTGCCGCCACTACCACC
CCAACTGCTGCTGTTGTTGAAACCCCTACCACGGCCGCTGTTCAGTCTACAACGCCCTCCATCACAGTTGCTGCT
CAGCCTACTACTTCCACCACCACGGTTGCGGCCCAGCCTACTACTTTCGCCACCACTGTCCGTCAATCGACTACT
TCTGCTGCGGCGCAAGTCCCTACTACCAGCGCTGATGCCTCCGCTACTACCTCGGCCGTATCTATCCCCACTGGT
AGTGCTGCAGATGTCCTATCCTGGATTGAGTCCTTGTTGGGCAACTTGGTGGGTAATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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