Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g59.t1
Gene name
Locationscaffold_01:143485..145303
Strand+
Gene length (bp)1818
Transcript length (bp)1683
Coding sequence length (bp)1683
Protein length (aa) 561

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01008 IF-2B Initiation factor 2 subunit family 1.1E-73 215 547

GO

GO Term Description Terminal node
GO:0044237 cellular metabolic process Yes
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g59.t1
MNRKLGLRRSVSRLWHHFILHKMTEPSNSVPTAQVLTPASSALEQSQPVTENSPQTLPIRDSKPTKPTGDAPAST
DGTTDKPLSPAELKKKAKADKAARRIREKLDKEGGTIGSAIPTPGVGAQARSPTTPKKDAAGAGSAQKGPRPLTP
RRGSGPLAQTGSVLVEQKKKKDDKKVAVFGHLYGQQRRVTVAGATKEVHHAILALGMQLMDYTICGSSARCVATL
IAFKRVIESYTTPMGTSLARHLTTHLSYQITYLSTCRPLSISQGNAIRALKLFIAGIDPSTPETSAKISLCEYID
SFIREKITVADQVIADSAAQKVQDGDVIVTFAGSSIVKQTLLLAHNQGKRFRVSIIDSRPLFEGKSLARDLAKSG
LDVQYSLVHAITHAVKDATKVFLGAHGMTSNGGLYSRVGTALVAMSAKERASGVEIPVIVCCETIKFTDRVALDS
IVVNEIADANELLPLNTPVSLVVRDPADAYVPPPPENKKGGNRTPVPEPPVTPHKTSSSPLANWRNTPNLQLLNI
MYDVTPAEYVDMVITEMGSLPPSAVPIVHRMVTNL*
Coding >Pro_DTO377G3_2|g59.t1
ATGAACCGCAAGTTAGGGCTGCGCCGCTCAGTGAGCCGCTTATGGCATCATTTCATTTTGCACAAGATGACGGAA
CCCTCCAATTCAGTGCCGACCGCGCAAGTCTTAACTCCTGCCTCGTCAGCACTAGAGCAATCTCAACCCGTGACC
GAAAACTCTCCGCAGACTCTCCCGATCCGCGACTCAAAACCCACTAAACCCACCGGAGATGCGCCCGCGTCCACA
GACGGCACCACAGATAAGCCGCTTAGCCCAGCCGAGTTGAAGAAGAAAGCCAAGGCTGATAAGGCTGCCCGACGT
ATCCGAGAGAAACTCGATAAGGAAGGAGGCACCATCGGTAGTGCCATTCCCACTCCTGGTGTCGGCGCCCAGGCG
CGTTCACCAACTACGCCGAAGAAGGATGCCGCTGGTGCTGGCTCTGCACAGAAGGGACCCCGACCTCTTACCCCG
CGCCGTGGCTCAGGTCCCCTCGCGCAAACTGGGTCCGTTCTCGTGGAGCAAAAGAAGAAGAAGGATGATAAGAAG
GTTGCTGTCTTCGGCCATTTGTATGGACAACAGCGCCGTGTCACTGTCGCCGGTGCCACAAAGGAAGTGCACCAT
GCCATCTTGGCCTTGGGTATGCAGTTGATGGACTACACTATCTGCGGCAGCAGTGCGCGCTGTGTGGCAACGTTG
ATTGCTTTTAAACGAGTCATTGAATCTTACACAACCCCCATGGGCACCTCTCTGGCTCGCCACCTCACCACGCAC
CTCTCGTATCAAATTACCTACCTCTCGACATGCCGACCCCTCTCTATCAGCCAGGGAAATGCTATCCGTGCCCTG
AAGCTCTTCATTGCAGGCATTGATCCCTCTACCCCCGAGACGAGTGCGAAGATCTCACTCTGCGAATACATCGAC
AGCTTTATCCGGGAGAAGATTACCGTCGCCGACCAGGTGATTGCAGACAGCGCAGCACAGAAGGTTCAAGACGGC
GACGTGATCGTAACATTTGCCGGCAGCAGCATTGTCAAGCAGACACTTTTGTTAGCGCACAACCAAGGCAAGCGG
TTCCGTGTCTCGATCATTGACTCAAGGCCTCTCTTTGAAGGCAAAAGCCTCGCCCGCGATCTCGCCAAGAGCGGG
CTCGACGTCCAATATTCCCTCGTCCACGCCATCACCCACGCCGTCAAGGATGCCACAAAGGTCTTCCTCGGCGCT
CACGGCATGACCAGTAACGGCGGCTTGTACTCCCGCGTCGGCACCGCTCTTGTTGCCATGTCCGCCAAAGAGCGC
GCCAGTGGCGTCGAAATCCCCGTCATTGTCTGCTGTGAGACGATCAAATTCACCGACCGCGTCGCCCTCGACAGC
ATCGTCGTCAATGAAATCGCCGACGCCAACGAGCTGCTACCCTTGAACACTCCTGTCTCCCTCGTCGTTCGCGAC
CCGGCAGATGCGTATGTCCCCCCTCCGCCTGAGAATAAGAAGGGTGGAAACCGCACCCCGGTTCCCGAACCTCCT
GTTACCCCGCACAAGACCTCTTCGTCGCCTCTCGCGAACTGGCGCAACACTCCCAACCTGCAGCTGCTGAACATC
ATGTATGATGTTACGCCTGCGGAATACGTCGACATGGTTATTACTGAGATGGGCAGTCTTCCTCCCAGTGCTGTC
CCGATTGTCCACCGGATGGTGACAAACCTGTGA
Transcript >Pro_DTO377G3_2|g59.t1
ATGAACCGCAAGTTAGGGCTGCGCCGCTCAGTGAGCCGCTTATGGCATCATTTCATTTTGCACAAGATGACGGAA
CCCTCCAATTCAGTGCCGACCGCGCAAGTCTTAACTCCTGCCTCGTCAGCACTAGAGCAATCTCAACCCGTGACC
GAAAACTCTCCGCAGACTCTCCCGATCCGCGACTCAAAACCCACTAAACCCACCGGAGATGCGCCCGCGTCCACA
GACGGCACCACAGATAAGCCGCTTAGCCCAGCCGAGTTGAAGAAGAAAGCCAAGGCTGATAAGGCTGCCCGACGT
ATCCGAGAGAAACTCGATAAGGAAGGAGGCACCATCGGTAGTGCCATTCCCACTCCTGGTGTCGGCGCCCAGGCG
CGTTCACCAACTACGCCGAAGAAGGATGCCGCTGGTGCTGGCTCTGCACAGAAGGGACCCCGACCTCTTACCCCG
CGCCGTGGCTCAGGTCCCCTCGCGCAAACTGGGTCCGTTCTCGTGGAGCAAAAGAAGAAGAAGGATGATAAGAAG
GTTGCTGTCTTCGGCCATTTGTATGGACAACAGCGCCGTGTCACTGTCGCCGGTGCCACAAAGGAAGTGCACCAT
GCCATCTTGGCCTTGGGTATGCAGTTGATGGACTACACTATCTGCGGCAGCAGTGCGCGCTGTGTGGCAACGTTG
ATTGCTTTTAAACGAGTCATTGAATCTTACACAACCCCCATGGGCACCTCTCTGGCTCGCCACCTCACCACGCAC
CTCTCGTATCAAATTACCTACCTCTCGACATGCCGACCCCTCTCTATCAGCCAGGGAAATGCTATCCGTGCCCTG
AAGCTCTTCATTGCAGGCATTGATCCCTCTACCCCCGAGACGAGTGCGAAGATCTCACTCTGCGAATACATCGAC
AGCTTTATCCGGGAGAAGATTACCGTCGCCGACCAGGTGATTGCAGACAGCGCAGCACAGAAGGTTCAAGACGGC
GACGTGATCGTAACATTTGCCGGCAGCAGCATTGTCAAGCAGACACTTTTGTTAGCGCACAACCAAGGCAAGCGG
TTCCGTGTCTCGATCATTGACTCAAGGCCTCTCTTTGAAGGCAAAAGCCTCGCCCGCGATCTCGCCAAGAGCGGG
CTCGACGTCCAATATTCCCTCGTCCACGCCATCACCCACGCCGTCAAGGATGCCACAAAGGTCTTCCTCGGCGCT
CACGGCATGACCAGTAACGGCGGCTTGTACTCCCGCGTCGGCACCGCTCTTGTTGCCATGTCCGCCAAAGAGCGC
GCCAGTGGCGTCGAAATCCCCGTCATTGTCTGCTGTGAGACGATCAAATTCACCGACCGCGTCGCCCTCGACAGC
ATCGTCGTCAATGAAATCGCCGACGCCAACGAGCTGCTACCCTTGAACACTCCTGTCTCCCTCGTCGTTCGCGAC
CCGGCAGATGCGTATGTCCCCCCTCCGCCTGAGAATAAGAAGGGTGGAAACCGCACCCCGGTTCCCGAACCTCCT
GTTACCCCGCACAAGACCTCTTCGTCGCCTCTCGCGAACTGGCGCAACACTCCCAACCTGCAGCTGCTGAACATC
ATGTATGATGTTACGCCTGCGGAATACGTCGACATGGTTATTACTGAGATGGGCAGTCTTCCTCCCAGTGCTGTC
CCGATTGTCCACCGGATGGTGACAAACCTGTGA
Gene >Pro_DTO377G3_2|g59.t1
ATGAACCGCAAGTTAGGGCTGCGCCGCTCAGTGAGCCGCTTATGGCATCATTTCATTTTGCGTGAGTCAACCCTC
CCTCCTCCCCACCATCTTCGCAGAACCACACTCACACGTGAATTAATTCACAGACAAGATGACGGAACCCTCCAA
TTCAGTGCCGACCGCGCAAGTCTTAACTCCTGCCTCGTCAGCACTAGAGCAATCTCAACCCGTGACCGAAAACTC
TCCGCAGACTCTCCCGATCCGCGACTCAAAACCCACTAAACCCACCGGAGATGCGCCCGCGTCCACAGACGGCAC
CACAGATAAGCCGCTTAGCCCAGCCGAGTTGAAGAAGAAAGCCAAGGCTGATAAGGCTGCCCGACGTATCCGAGA
GAAACTCGATAAGGAAGGAGGCACCATCGGTAGTGCCATTCCCACTCCTGGTGTCGGCGCCCAGGCGCGTTCACC
AACTACGCCGAAGAAGGATGCCGCTGGTGCTGGCTCTGCACAGAAGGGACCCCGACCTCTTACCCCGCGCCGTGG
CTCAGGTCCCCTCGCGCAAACTGGGTCCGTTCTCGTGGAGCAAAAGAAGAAGAAGGATGATAAGAAGGTTGCTGT
CTTCGGCCATTTGTATGGACAACAGCGCCGTGTCACTGTCGCCGGTGCCACAAAGGAAGTGCACCATGCCATCTT
GGCCTTGGGTATGCAGTTGATGGACTACACTATCTGCGGCAGCAGTGCGCGCTGTGTGGCAACGTTGATTGCTTT
TAAACGAGTATGTTGTTGTTCTTCTGTTTCATGCTGGTAAGACATGACCCTATACTGACAAGTCACTTTCTCAAG
GTCATTGAATCTTACACAACCCCCATGGGCACCTCTCTGGCTCGCCACCTCACCACGCACCTCTCGTATCAAATT
ACCTACCTCTCGACATGCCGACCCCTCTCTATCAGCCAGGGAAATGCTATCCGTGCCCTGAAGCTCTTCATTGCA
GGCATTGATCCCTCTACCCCCGAGACGAGTGCGAAGATCTCACTCTGCGAATACATCGACAGCTTTATCCGGGAG
AAGATTACCGTCGCCGACCAGGTGATTGCAGACAGCGCAGCACAGAAGGTTCAAGACGGCGACGTGATCGTAACA
TTTGCCGGCAGCAGCATTGTCAAGCAGACACTTTTGTTAGCGCACAACCAAGGCAAGCGGTTCCGTGTCTCGATC
ATTGACTCAAGGCCTCTCTTTGAAGGCAAAAGCCTCGCCCGCGATCTCGCCAAGAGCGGGCTCGACGTCCAATAT
TCCCTCGTCCACGCCATCACCCACGCCGTCAAGGATGCCACAAAGGTCTTCCTCGGCGCTCACGGCATGACCAGT
AACGGCGGCTTGTACTCCCGCGTCGGCACCGCTCTTGTTGCCATGTCCGCCAAAGAGCGCGCCAGTGGCGTCGAA
ATCCCCGTCATTGTCTGCTGTGAGACGATCAAATTCACCGACCGCGTCGCCCTCGACAGCATCGTCGTCAATGAA
ATCGCCGACGCCAACGAGCTGCTACCCTTGAACACTCCTGTCTCCCTCGTCGTTCGCGACCCGGCAGATGCGTAT
GTCCCCCCTCCGCCTGAGAATAAGAAGGGTGGAAACCGCACCCCGGTTCCCGAACCTCCTGTTACCCCGCACAAG
ACCTCTTCGTCGCCTCTCGCGAACTGGCGCAACACTCCCAACCTGCAGCTGCTGAACATCATGTATGATGTTACG
CCTGCGGAATACGTCGACATGGTTATTACTGAGATGGGCAGTCTTCCTCCCAGTGCTGTCCCGATTGTCCACCGG
ATGGTGACAAACCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail