Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5896.t1
Gene name
Locationscaffold_15:100082..101762
Strand+
Gene length (bp)1680
Transcript length (bp)1680
Coding sequence length (bp)1680
Protein length (aa) 560

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02776 TPP_enzyme_N Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2.4E-34 3 177
PF02775 TPP_enzyme_C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 2.9E-22 403 531
PF00205 TPP_enzyme_M Thiamine pyrophosphate enzyme, central domain 4.3E-23 199 312

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0000287 magnesium ion binding Yes
GO:0030976 thiamine pyrophosphate binding Yes
GO:0097159 organic cyclic compound binding No
GO:0036094 small molecule binding No
GO:0043168 anion binding No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0050662 coenzyme binding No
GO:0048037 cofactor binding No
GO:0019842 vitamin binding No
GO:1901681 sulfur compound binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5896.t1
MTTVGSYLATRLAQIGIERHFVVPGDYNLILLDKLQQEPSLNEINCTNELNCSMAAEGYARAKGVAACVVTYSVG
AFSAFNGIGSAYGENLPVILISGSPNTNDSGDFNLLHHTLGTHDFEYQLQMAKKITVAAVSIRRALDAPKLIDFT
IRKALRTKKPVYIEIPTNLSNQPCAPPGPPSVILEPLHSDPAVLKEAVHKTATFLSQKSKITILVGPKVRSAKAE
GALRDFAEALGCAVAVMPSAKSFFPENHPQFAGVYWGLASTLGAESIVDWSDVIVCVGTVFTDYSTVGWTSEPTD
SIRVTADVDQVQLPGAEYSRVYLKEFLSGLSHLVKKDPATMLEYKRLSPAEPSLTASHTNEKLTRKEMCLQIQNI
VTSKTTLFADTGDAWFDAIKMRLPEGTRLEVEMQWGHIGWSIPASLGYAVGHPDRQVITLVGDGSFQMTAQEVSQ
LTRLRIPVTIFLINNIGYTIEVEIHDGIYNNIKNWDYAAFVESFNAKDGHGRGFRATTTGELRAAIEAAKKNRHG
PTLIECAIDRDDCSKELISWGHFVAAANGRAPKA*
Coding >Pro_DTO377G3_2|g5896.t1
ATGACTACAGTCGGAAGCTATCTAGCCACCCGACTGGCTCAGATTGGTATCGAGAGGCACTTCGTAGTGCCGGGT
GACTATAACTTGATCCTGTTGGACAAACTGCAACAGGAACCCAGTCTAAACGAGATCAACTGCACAAATGAATTG
AACTGCTCCATGGCCGCTGAAGGCTACGCACGAGCCAAGGGCGTCGCTGCATGTGTCGTCACCTACAGCGTCGGT
GCTTTCTCAGCTTTCAACGGCATTGGGAGTGCCTATGGTGAAAACCTCCCTGTCATTCTCATCAGTGGTTCACCC
AACACCAATGATTCAGGTGACTTCAACCTACTTCACCACACGCTCGGGACTCATGACTTTGAGTATCAGTTGCAA
ATGGCGAAAAAGATCACGGTCGCTGCGGTTTCAATTCGTCGCGCCTTGGATGCGCCGAAACTGATCGACTTTACC
ATCCGCAAAGCACTCCGTACTAAGAAACCTGTATACATCGAGATTCCTACAAATTTGTCCAACCAACCGTGTGCG
CCCCCGGGACCACCGTCGGTCATCTTGGAGCCTCTCCATAGTGACCCTGCCGTTCTGAAGGAGGCTGTTCACAAG
ACAGCCACCTTTTTGTCACAAAAAAGTAAGATTACGATCTTGGTTGGTCCAAAAGTCAGGTCTGCCAAAGCCGAG
GGCGCTCTCCGAGACTTTGCGGAAGCATTGGGCTGCGCGGTGGCAGTGATGCCTAGTGCCAAGTCATTCTTTCCG
GAGAATCATCCCCAGTTCGCTGGAGTTTACTGGGGTCTCGCCAGCACGCTGGGTGCTGAGTCCATCGTGGACTGG
TCCGACGTGATCGTCTGCGTTGGAACAGTCTTTACCGACTATAGCACTGTCGGCTGGACGAGCGAGCCGACCGAT
TCCATACGCGTGACGGCCGACGTTGACCAGGTTCAGCTCCCGGGAGCAGAATACTCTCGCGTCTACTTGAAAGAG
TTTCTGTCTGGACTGTCACATCTGGTGAAGAAAGACCCGGCAACAATGCTGGAATATAAACGGTTGAGCCCAGCC
GAGCCAAGTCTGACTGCCAGTCATACGAATGAAAAGCTCACACGAAAGGAGATGTGTCTGCAGATCCAGAATATC
GTCACCTCGAAGACAACCCTCTTTGCTGATACCGGCGATGCTTGGTTCGATGCTATTAAAATGCGGCTTCCCGAA
GGAACCAGATTGGAGGTTGAGATGCAATGGGGTCACATTGGATGGTCCATCCCCGCATCCCTTGGCTATGCCGTT
GGGCACCCCGATAGGCAAGTGATCACGCTGGTCGGGGATGGGTCATTCCAAATGACAGCGCAGGAAGTATCGCAA
CTGACCAGACTGCGCATTCCCGTTACTATATTCCTCATCAACAACATTGGATACACCATTGAGGTCGAGATTCAT
GATGGGATTTACAACAACATCAAGAACTGGGACTATGCCGCGTTCGTAGAGTCGTTCAATGCGAAAGATGGGCAT
GGCCGCGGTTTCCGCGCCACCACTACAGGAGAGCTTCGTGCGGCTATCGAAGCAGCGAAAAAGAACCGACACGGA
CCGACTCTAATTGAGTGTGCCATCGACCGTGACGACTGCAGCAAGGAGTTGATTAGCTGGGGCCATTTCGTGGCT
GCAGCTAATGGTCGTGCTCCCAAGGCATAG
Transcript >Pro_DTO377G3_2|g5896.t1
ATGACTACAGTCGGAAGCTATCTAGCCACCCGACTGGCTCAGATTGGTATCGAGAGGCACTTCGTAGTGCCGGGT
GACTATAACTTGATCCTGTTGGACAAACTGCAACAGGAACCCAGTCTAAACGAGATCAACTGCACAAATGAATTG
AACTGCTCCATGGCCGCTGAAGGCTACGCACGAGCCAAGGGCGTCGCTGCATGTGTCGTCACCTACAGCGTCGGT
GCTTTCTCAGCTTTCAACGGCATTGGGAGTGCCTATGGTGAAAACCTCCCTGTCATTCTCATCAGTGGTTCACCC
AACACCAATGATTCAGGTGACTTCAACCTACTTCACCACACGCTCGGGACTCATGACTTTGAGTATCAGTTGCAA
ATGGCGAAAAAGATCACGGTCGCTGCGGTTTCAATTCGTCGCGCCTTGGATGCGCCGAAACTGATCGACTTTACC
ATCCGCAAAGCACTCCGTACTAAGAAACCTGTATACATCGAGATTCCTACAAATTTGTCCAACCAACCGTGTGCG
CCCCCGGGACCACCGTCGGTCATCTTGGAGCCTCTCCATAGTGACCCTGCCGTTCTGAAGGAGGCTGTTCACAAG
ACAGCCACCTTTTTGTCACAAAAAAGTAAGATTACGATCTTGGTTGGTCCAAAAGTCAGGTCTGCCAAAGCCGAG
GGCGCTCTCCGAGACTTTGCGGAAGCATTGGGCTGCGCGGTGGCAGTGATGCCTAGTGCCAAGTCATTCTTTCCG
GAGAATCATCCCCAGTTCGCTGGAGTTTACTGGGGTCTCGCCAGCACGCTGGGTGCTGAGTCCATCGTGGACTGG
TCCGACGTGATCGTCTGCGTTGGAACAGTCTTTACCGACTATAGCACTGTCGGCTGGACGAGCGAGCCGACCGAT
TCCATACGCGTGACGGCCGACGTTGACCAGGTTCAGCTCCCGGGAGCAGAATACTCTCGCGTCTACTTGAAAGAG
TTTCTGTCTGGACTGTCACATCTGGTGAAGAAAGACCCGGCAACAATGCTGGAATATAAACGGTTGAGCCCAGCC
GAGCCAAGTCTGACTGCCAGTCATACGAATGAAAAGCTCACACGAAAGGAGATGTGTCTGCAGATCCAGAATATC
GTCACCTCGAAGACAACCCTCTTTGCTGATACCGGCGATGCTTGGTTCGATGCTATTAAAATGCGGCTTCCCGAA
GGAACCAGATTGGAGGTTGAGATGCAATGGGGTCACATTGGATGGTCCATCCCCGCATCCCTTGGCTATGCCGTT
GGGCACCCCGATAGGCAAGTGATCACGCTGGTCGGGGATGGGTCATTCCAAATGACAGCGCAGGAAGTATCGCAA
CTGACCAGACTGCGCATTCCCGTTACTATATTCCTCATCAACAACATTGGATACACCATTGAGGTCGAGATTCAT
GATGGGATTTACAACAACATCAAGAACTGGGACTATGCCGCGTTCGTAGAGTCGTTCAATGCGAAAGATGGGCAT
GGCCGCGGTTTCCGCGCCACCACTACAGGAGAGCTTCGTGCGGCTATCGAAGCAGCGAAAAAGAACCGACACGGA
CCGACTCTAATTGAGTGTGCCATCGACCGTGACGACTGCAGCAAGGAGTTGATTAGCTGGGGCCATTTCGTGGCT
GCAGCTAATGGTCGTGCTCCCAAGGCATAG
Gene >Pro_DTO377G3_2|g5896.t1
ATGACTACAGTCGGAAGCTATCTAGCCACCCGACTGGCTCAGATTGGTATCGAGAGGCACTTCGTAGTGCCGGGT
GACTATAACTTGATCCTGTTGGACAAACTGCAACAGGAACCCAGTCTAAACGAGATCAACTGCACAAATGAATTG
AACTGCTCCATGGCCGCTGAAGGCTACGCACGAGCCAAGGGCGTCGCTGCATGTGTCGTCACCTACAGCGTCGGT
GCTTTCTCAGCTTTCAACGGCATTGGGAGTGCCTATGGTGAAAACCTCCCTGTCATTCTCATCAGTGGTTCACCC
AACACCAATGATTCAGGTGACTTCAACCTACTTCACCACACGCTCGGGACTCATGACTTTGAGTATCAGTTGCAA
ATGGCGAAAAAGATCACGGTCGCTGCGGTTTCAATTCGTCGCGCCTTGGATGCGCCGAAACTGATCGACTTTACC
ATCCGCAAAGCACTCCGTACTAAGAAACCTGTATACATCGAGATTCCTACAAATTTGTCCAACCAACCGTGTGCG
CCCCCGGGACCACCGTCGGTCATCTTGGAGCCTCTCCATAGTGACCCTGCCGTTCTGAAGGAGGCTGTTCACAAG
ACAGCCACCTTTTTGTCACAAAAAAGTAAGATTACGATCTTGGTTGGTCCAAAAGTCAGGTCTGCCAAAGCCGAG
GGCGCTCTCCGAGACTTTGCGGAAGCATTGGGCTGCGCGGTGGCAGTGATGCCTAGTGCCAAGTCATTCTTTCCG
GAGAATCATCCCCAGTTCGCTGGAGTTTACTGGGGTCTCGCCAGCACGCTGGGTGCTGAGTCCATCGTGGACTGG
TCCGACGTGATCGTCTGCGTTGGAACAGTCTTTACCGACTATAGCACTGTCGGCTGGACGAGCGAGCCGACCGAT
TCCATACGCGTGACGGCCGACGTTGACCAGGTTCAGCTCCCGGGAGCAGAATACTCTCGCGTCTACTTGAAAGAG
TTTCTGTCTGGACTGTCACATCTGGTGAAGAAAGACCCGGCAACAATGCTGGAATATAAACGGTTGAGCCCAGCC
GAGCCAAGTCTGACTGCCAGTCATACGAATGAAAAGCTCACACGAAAGGAGATGTGTCTGCAGATCCAGAATATC
GTCACCTCGAAGACAACCCTCTTTGCTGATACCGGCGATGCTTGGTTCGATGCTATTAAAATGCGGCTTCCCGAA
GGAACCAGATTGGAGGTTGAGATGCAATGGGGTCACATTGGATGGTCCATCCCCGCATCCCTTGGCTATGCCGTT
GGGCACCCCGATAGGCAAGTGATCACGCTGGTCGGGGATGGGTCATTCCAAATGACAGCGCAGGAAGTATCGCAA
CTGACCAGACTGCGCATTCCCGTTACTATATTCCTCATCAACAACATTGGATACACCATTGAGGTCGAGATTCAT
GATGGGATTTACAACAACATCAAGAACTGGGACTATGCCGCGTTCGTAGAGTCGTTCAATGCGAAAGATGGGCAT
GGCCGCGGTTTCCGCGCCACCACTACAGGAGAGCTTCGTGCGGCTATCGAAGCAGCGAAAAAGAACCGACACGGA
CCGACTCTAATTGAGTGTGCCATCGACCGTGACGACTGCAGCAAGGAGTTGATTAGCTGGGGCCATTTCGTGGCT
GCAGCTAATGGTCGTGCTCCCAAGGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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