Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g5894.t1
Gene name
Location	scaffold_15:96847..97892
Strand	-
Gene length (bp)	1045
Transcript length (bp)	990
Coding sequence length (bp)	990
Protein length (aa)	330

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00056	Ldh_1_N	lactate/malate dehydrogenase, NAD binding domain	1.3E-43	22	160
PF02866	Ldh_1_C	lactate/malate dehydrogenase, alpha/beta C-terminal domain	6.1E-25	163	327

GO

GO Term	Description	Terminal node
GO:0016491	oxidoreductase activity	Yes
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Yes
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	No
GO:0003674	molecular_function	No
GO:0003824	catalytic activity	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	1862
Change Orthofinder run

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2\|g2307.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2\|g30.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2\|g1075.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2\|g5999.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3\|g1812.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2\|g3058.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2\|g6424.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2\|g1517.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2\|g3273.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2\|g724.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2\|g2695.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2\|g3339.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2\|g997.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2\|g1377.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2\|g8645.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2\|g2892.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2\|g2349.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2\|g5311.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2\|g5779.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2\|g6047.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2\|g5419.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2\|g4018.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2\|g9224.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2\|g3330.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2\|g6960.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2\|g906.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2\|g2355.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2\|g4870.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2\|g3803.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2\|g2991.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2\|g1859.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2\|g5160.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2\|g4092.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2\|g5894.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5894.t1 MQSNSARNSSKKPTIAIDLHPVKIAIVGAGNVGASTAYALLLSGLAAEIVLIDLNRRKAEGEVMDLNHAAPFSHQ TKITLGDLEDCSEAAIVIITAGANQKPGQSRLDLLRINAKIIEDIVPKVTQMAPSTILLIASNPVDVLTFLSWKL SGFPPSRVIGSGTVLDTARLRDTLGRRLDVDPSNIHADVVGEHGDSELPVWSRANISGIPLAEFSQQAGQDAKDI MKQSFQDTRNAAYEIIKLKGMTDYGISAGLVRIVETILRNENTLMTVSTAGTFAGVSEIALSMPKKVNRTGAHHV IDIKLSEEESRELEKSAHTIKSSIESLKS*
Coding	>Pro_DTO377G3_2\|g5894.t1 ATGCAATCCAATTCAGCCCGAAATTCTTCAAAGAAGCCTACAATTGCCATCGATCTCCATCCGGTCAAAATCGCC ATCGTCGGCGCAGGCAATGTCGGGGCTTCTACCGCTTACGCTCTTCTTCTGAGTGGTCTCGCAGCCGAAATCGTC CTGATCGACCTTAATCGACGCAAGGCCGAAGGAGAAGTAATGGACTTGAACCATGCAGCTCCCTTCTCACACCAG ACCAAGATCACACTTGGTGATCTTGAAGACTGCTCTGAGGCAGCGATTGTCATAATCACAGCTGGCGCAAACCAG AAGCCCGGACAGTCGCGGTTGGATCTCTTACGGATCAATGCCAAAATCATCGAGGACATTGTTCCAAAAGTCACG CAAATGGCCCCGTCCACCATCCTTCTTATAGCGAGTAACCCAGTCGATGTCTTGACCTTCCTGAGCTGGAAATTG TCTGGGTTCCCGCCGAGCCGCGTGATCGGGTCCGGTACCGTTCTGGACACCGCACGCTTGCGCGACACTCTAGGC CGACGATTGGATGTTGACCCGAGTAACATTCATGCAGACGTTGTTGGGGAGCATGGTGATAGCGAATTGCCAGTG TGGTCGCGGGCCAATATATCAGGTATCCCGTTGGCGGAGTTTTCCCAGCAGGCTGGTCAGGATGCAAAGGATATC ATGAAACAATCATTCCAAGACACCAGGAATGCTGCTTATGAGATAATCAAGCTGAAAGGCATGACGGACTATGGT ATCTCTGCTGGCTTGGTGAGGATCGTGGAGACTATACTCAGGAATGAGAACACGCTTATGACTGTGTCAACGGCT GGAACCTTTGCAGGCGTGAGTGAAATCGCGTTGAGCATGCCGAAAAAGGTAAACCGAACCGGGGCCCACCATGTT ATCGACATCAAGCTGTCTGAAGAAGAAAGTCGGGAGCTGGAAAAGTCGGCACACACTATCAAATCTAGCATAGAA TCTTTGAAGTCATAA
Transcript	>Pro_DTO377G3_2\|g5894.t1 ATGCAATCCAATTCAGCCCGAAATTCTTCAAAGAAGCCTACAATTGCCATCGATCTCCATCCGGTCAAAATCGCC ATCGTCGGCGCAGGCAATGTCGGGGCTTCTACCGCTTACGCTCTTCTTCTGAGTGGTCTCGCAGCCGAAATCGTC CTGATCGACCTTAATCGACGCAAGGCCGAAGGAGAAGTAATGGACTTGAACCATGCAGCTCCCTTCTCACACCAG ACCAAGATCACACTTGGTGATCTTGAAGACTGCTCTGAGGCAGCGATTGTCATAATCACAGCTGGCGCAAACCAG AAGCCCGGACAGTCGCGGTTGGATCTCTTACGGATCAATGCCAAAATCATCGAGGACATTGTTCCAAAAGTCACG CAAATGGCCCCGTCCACCATCCTTCTTATAGCGAGTAACCCAGTCGATGTCTTGACCTTCCTGAGCTGGAAATTG TCTGGGTTCCCGCCGAGCCGCGTGATCGGGTCCGGTACCGTTCTGGACACCGCACGCTTGCGCGACACTCTAGGC CGACGATTGGATGTTGACCCGAGTAACATTCATGCAGACGTTGTTGGGGAGCATGGTGATAGCGAATTGCCAGTG TGGTCGCGGGCCAATATATCAGGTATCCCGTTGGCGGAGTTTTCCCAGCAGGCTGGTCAGGATGCAAAGGATATC ATGAAACAATCATTCCAAGACACCAGGAATGCTGCTTATGAGATAATCAAGCTGAAAGGCATGACGGACTATGGT ATCTCTGCTGGCTTGGTGAGGATCGTGGAGACTATACTCAGGAATGAGAACACGCTTATGACTGTGTCAACGGCT GGAACCTTTGCAGGCGTGAGTGAAATCGCGTTGAGCATGCCGAAAAAGGTAAACCGAACCGGGGCCCACCATGTT ATCGACATCAAGCTGTCTGAAGAAGAAAGTCGGGAGCTGGAAAAGTCGGCACACACTATCAAATCTAGCATAGAA TCTTTGAAGTCATAA
Gene	>Pro_DTO377G3_2\|g5894.t1 ATGCAATCCAATTCAGCCCGAAATTCTTCAAAGAAGCCTACAATTGCCATCGATCTCCATGTTAGTTTTGAAGCC TCACTTGATAAATGCATTGAACCCATACTGATTACAAAAGCCGGTCAAAATCGCCATCGTCGGCGCAGGCAATGT CGGGGCTTCTACCGCTTACGCTCTTCTTCTGAGTGGTCTCGCAGCCGAAATCGTCCTGATCGACCTTAATCGACG CAAGGCCGAAGGAGAAGTAATGGACTTGAACCATGCAGCTCCCTTCTCACACCAGACCAAGATCACACTTGGTGA TCTTGAAGACTGCTCTGAGGCAGCGATTGTCATAATCACAGCTGGCGCAAACCAGAAGCCCGGACAGTCGCGGTT GGATCTCTTACGGATCAATGCCAAAATCATCGAGGACATTGTTCCAAAAGTCACGCAAATGGCCCCGTCCACCAT CCTTCTTATAGCGAGTAACCCAGTCGATGTCTTGACCTTCCTGAGCTGGAAATTGTCTGGGTTCCCGCCGAGCCG CGTGATCGGGTCCGGTACCGTTCTGGACACCGCACGCTTGCGCGACACTCTAGGCCGACGATTGGATGTTGACCC GAGTAACATTCATGCAGACGTTGTTGGGGAGCATGGTGATAGCGAATTGCCAGTGTGGTCGCGGGCCAATATATC AGGTATCCCGTTGGCGGAGTTTTCCCAGCAGGCTGGTCAGGATGCAAAGGATATCATGAAACAATCATTCCAAGA CACCAGGAATGCTGCTTATGAGATAATCAAGCTGAAAGGCATGACGGACTATGGTATCTCTGCTGGCTTGGTGAG GATCGTGGAGACTATACTCAGGAATGAGAACACGCTTATGACTGTGTCAACGGCTGGAACCTTTGCAGGCGTGAG TGAAATCGCGTTGAGCATGCCGAAAAAGGTAAACCGAACCGGGGCCCACCATGTTATCGACATCAAGCTGTCTGA AGAAGAAAGTCGGGAGCTGGAAAAGTCGGCACACACTATCAAATCTAGCATAGAATCTTTGAAGTCATAA

Fungal Genomics

General Properties

Overview

PFAM Domains

GO

Deeploc

SignalP

Transmembrane Domains

Transcription Factor Class

CAZymes

Secondary Metabolism

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Orthologs

Sequences