Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5882.t1
Gene name
Locationscaffold_15:59598..60359
Strand+
Gene length (bp)761
Transcript length (bp)711
Coding sequence length (bp)711
Protein length (aa) 237

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00877 NLPC_P60 NlpC/P60 family 8.7E-19 117 215

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5882.t1
MHFISLIAFSLTTAITAVSAYPITGDTVNCRSGPGTSHTVVKTYKKAHDVKITCQTTGDSISGNNIWDKTSDGCY
VADYYVKTGSNSYVTAKCSSSGSTSSTGTGKAIIAAAEKEKGLPYVWGGGGCKGPSGGGFDCSGLTQYAVCQALK
KTIPRVAQDQYNSSLGKRYPRAQAKPGDLLFWATGGDCKNKVVHVGIFINDKTMINAAHTGTPVREQAIWTSYGG
ESICPYVMRFT*
Coding >Pro_DTO377G3_2|g5882.t1
ATGCATTTCATCTCCCTCATTGCCTTCTCCCTCACAACCGCTATAACAGCGGTCAGCGCCTACCCCATCACCGGC
GACACCGTCAACTGCCGCTCCGGCCCTGGAACAAGCCATACAGTCGTCAAGACATACAAAAAAGCCCACGATGTC
AAAATCACCTGCCAAACCACCGGAGACTCAATCTCCGGCAACAACATCTGGGACAAGACCTCCGACGGCTGCTAT
GTAGCTGACTACTACGTGAAAACCGGCAGCAACAGCTACGTAACCGCCAAATGCAGTAGCAGTGGCAGCACCAGC
AGCACCGGCACCGGAAAAGCCATCATCGCCGCAGCCGAGAAGGAGAAAGGCCTCCCGTACGTCTGGGGCGGCGGT
GGTTGCAAGGGTCCCTCCGGCGGCGGCTTTGACTGCTCCGGTCTGACACAGTATGCTGTCTGCCAGGCTTTGAAG
AAGACAATTCCGCGTGTCGCGCAGGACCAGTATAACTCCAGCTTGGGCAAGCGGTATCCTCGTGCGCAGGCTAAG
CCTGGTGATCTCTTGTTCTGGGCTACTGGTGGTGATTGCAAGAACAAGGTTGTGCATGTCGGTATCTTTATCAAT
GATAAGACGATGATTAATGCTGCTCACACTGGTACGCCGGTGCGTGAGCAGGCTATTTGGACTTCCTATGGTGGA
GAGAGTATCTGTCCTTATGTTATGAGATTCACTTGA
Transcript >Pro_DTO377G3_2|g5882.t1
ATGCATTTCATCTCCCTCATTGCCTTCTCCCTCACAACCGCTATAACAGCGGTCAGCGCCTACCCCATCACCGGC
GACACCGTCAACTGCCGCTCCGGCCCTGGAACAAGCCATACAGTCGTCAAGACATACAAAAAAGCCCACGATGTC
AAAATCACCTGCCAAACCACCGGAGACTCAATCTCCGGCAACAACATCTGGGACAAGACCTCCGACGGCTGCTAT
GTAGCTGACTACTACGTGAAAACCGGCAGCAACAGCTACGTAACCGCCAAATGCAGTAGCAGTGGCAGCACCAGC
AGCACCGGCACCGGAAAAGCCATCATCGCCGCAGCCGAGAAGGAGAAAGGCCTCCCGTACGTCTGGGGCGGCGGT
GGTTGCAAGGGTCCCTCCGGCGGCGGCTTTGACTGCTCCGGTCTGACACAGTATGCTGTCTGCCAGGCTTTGAAG
AAGACAATTCCGCGTGTCGCGCAGGACCAGTATAACTCCAGCTTGGGCAAGCGGTATCCTCGTGCGCAGGCTAAG
CCTGGTGATCTCTTGTTCTGGGCTACTGGTGGTGATTGCAAGAACAAGGTTGTGCATGTCGGTATCTTTATCAAT
GATAAGACGATGATTAATGCTGCTCACACTGGTACGCCGGTGCGTGAGCAGGCTATTTGGACTTCCTATGGTGGA
GAGAGTATCTGTCCTTATGTTATGAGATTCACTTGA
Gene >Pro_DTO377G3_2|g5882.t1
ATGCATTTCATCTCCCTCATTGCCTTCTCCCTCACAACCGCTATAACAGCGGTCAGCGCCTACCCCATCACCGGC
GACACCGTCAACTGCCGCTCCGGCCCTGGAACAAGCCATACAGTCGTCAAGACATACAAAAAAGCCCACGATGTC
AAAATCACCTGCCAAACCACCGGAGACTCAATCTCCGGCAACAACATCTGGGACAAGACCTCCGACGGCTGCTAT
GTAGCTGACTACTACGTGAAAACCGGCAGCAACAGCTACGTAACCGCCAAATGCAGTAGCAGTGGCAGCACCAGC
AGCACCGGCACCGGAAAAGCCATCATCGCCGCAGCCGAGAAGGAGAAAGGCCTCCCGTACGTCTGGGGCGGCGGT
GGTTGCAAGGGTCCCTCCGGCGGCGGCTTTGACTGCTCCGGTCTGACACAGTATGCTGTCTGCCAGGCTTTGAAG
AAGACAATTCCGCGTGTCGCGCAGGACCAGTATAACTCCAGCTTGGGCAAGCGGTATCCTCGTGCGCAGGCTAAG
CCTGGTGATCTCTTGTTCTGGGCTACTGGTGGTGATTGCAAGAACAAGGTTGTGCATGTCGGTATCTTTATCAAT
GATAAGACGATGATTAATGCTGCTCACACTGGTACGCCGGTGCGTGAGCAGGCTATTTGGACTTCCTATGGTGGA
GAGAGTATCTGTCCTTATGTTATGAGGTATGTATATCATTCTTGGGTTTTGGGTTGTCATACTAACTGGTGTATA
GATTCACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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