Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5864.t1
Gene name
Locationscaffold_15:20610..21571
Strand+
Gene length (bp)961
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03998 Utp11 Utp11 protein 1.9E-59 10 288

GO

GO Term Description Terminal node
GO:0006364 rRNA processing Yes
GO:0032040 small-subunit processome Yes
GO:0046483 heterocycle metabolic process No
GO:0044237 cellular metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0071704 organic substance metabolic process No
GO:0034470 ncRNA processing No
GO:1901360 organic cyclic compound metabolic process No
GO:0044238 primary metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0006396 RNA processing No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1990904 ribonucleoprotein complex No
GO:0005575 cellular_component No
GO:0008152 metabolic process No
GO:0032991 protein-containing complex No
GO:0008150 biological_process No
GO:0006807 nitrogen compound metabolic process No
GO:0030684 preribosome No
GO:0006725 cellular aromatic compound metabolic process No
GO:0016072 rRNA metabolic process No
GO:0016070 RNA metabolic process No
GO:0034660 ncRNA metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5864.t1
MSSMRNAVQRRNHKERGQLQGREKWGLLEKHKDYSLRAKDYNAKKAKLKRLEEKVRDRNPDEFAFGMMGEKNRTQ
GRHGRGKGTARDSAAAQGLSHEAIKLLKTQDKGYLRTVGERVRREIERLERDVKLQDGMNKVLGKKDGKKDESDD
DGFDDDSDFDFGAPVQSKPTRVVFADDRQDQLAMKKQKIQKEEPALDSEEEEQTSSKTRKTPKQLEAERQALVDA
RRARKLRKRAIEARHNKLTALHKQYAEIRTAEQELDWQRAKMENSVGGTNRDGIKWKIRERKR*
Coding >Pro_DTO377G3_2|g5864.t1
ATGTCGTCCATGCGCAACGCCGTCCAACGGCGGAACCACAAAGAGCGTGGCCAGCTCCAGGGCCGCGAGAAATGG
GGTCTTCTCGAGAAGCACAAGGATTACTCGCTCCGTGCCAAAGATTACAATGCCAAGAAGGCTAAGCTGAAGCGC
CTCGAAGAGAAGGTGCGGGATCGCAACCCCGATGAGTTCGCCTTCGGTATGATGGGAGAGAAGAACCGGACCCAG
GGTCGGCACGGACGTGGCAAAGGCACAGCACGAGACTCTGCCGCAGCGCAGGGACTGAGCCACGAGGCAATCAAG
CTGCTCAAGACGCAAGATAAGGGTTATCTTCGGACGGTTGGCGAGCGGGTACGCCGCGAGATTGAGCGCCTGGAG
CGCGACGTGAAATTGCAAGATGGCATGAACAAGGTCCTTGGCAAAAAGGATGGGAAAAAGGACGAGAGCGACGAT
GACGGGTTTGACGACGACTCCGATTTCGATTTCGGGGCGCCGGTGCAATCGAAACCAACCAGGGTGGTGTTTGCC
GATGATAGACAAGACCAACTGGCAATGAAGAAGCAGAAGATACAAAAAGAAGAACCTGCGCTAGATTCAGAGGAA
GAAGAGCAGACGTCAAGCAAGACCCGCAAGACACCTAAGCAGCTTGAGGCTGAGCGGCAAGCACTTGTGGATGCT
CGGCGGGCTCGCAAGCTCCGGAAACGAGCCATCGAGGCCCGACACAACAAGCTGACTGCGTTGCACAAGCAGTAC
GCCGAGATTCGGACCGCAGAGCAAGAGCTTGATTGGCAGCGGGCTAAGATGGAAAATTCCGTGGGAGGCACCAAC
AGGGACGGAATCAAGTGGAAGATCCGTGAGCGCAAGCGCTAA
Transcript >Pro_DTO377G3_2|g5864.t1
ATGTCGTCCATGCGCAACGCCGTCCAACGGCGGAACCACAAAGAGCGTGGCCAGCTCCAGGGCCGCGAGAAATGG
GGTCTTCTCGAGAAGCACAAGGATTACTCGCTCCGTGCCAAAGATTACAATGCCAAGAAGGCTAAGCTGAAGCGC
CTCGAAGAGAAGGTGCGGGATCGCAACCCCGATGAGTTCGCCTTCGGTATGATGGGAGAGAAGAACCGGACCCAG
GGTCGGCACGGACGTGGCAAAGGCACAGCACGAGACTCTGCCGCAGCGCAGGGACTGAGCCACGAGGCAATCAAG
CTGCTCAAGACGCAAGATAAGGGTTATCTTCGGACGGTTGGCGAGCGGGTACGCCGCGAGATTGAGCGCCTGGAG
CGCGACGTGAAATTGCAAGATGGCATGAACAAGGTCCTTGGCAAAAAGGATGGGAAAAAGGACGAGAGCGACGAT
GACGGGTTTGACGACGACTCCGATTTCGATTTCGGGGCGCCGGTGCAATCGAAACCAACCAGGGTGGTGTTTGCC
GATGATAGACAAGACCAACTGGCAATGAAGAAGCAGAAGATACAAAAAGAAGAACCTGCGCTAGATTCAGAGGAA
GAAGAGCAGACGTCAAGCAAGACCCGCAAGACACCTAAGCAGCTTGAGGCTGAGCGGCAAGCACTTGTGGATGCT
CGGCGGGCTCGCAAGCTCCGGAAACGAGCCATCGAGGCCCGACACAACAAGCTGACTGCGTTGCACAAGCAGTAC
GCCGAGATTCGGACCGCAGAGCAAGAGCTTGATTGGCAGCGGGCTAAGATGGAAAATTCCGTGGGAGGCACCAAC
AGGGACGGAATCAAGTGGAAGATCCGTGAGCGCAAGCGCTAA
Gene >Pro_DTO377G3_2|g5864.t1
ATGTCGTCCATGCGCAACGCCGTCCAACGGCGGAACCACAAAGAGCGTGGCCAGCTCCAGGGCCGCGAGAAATGG
GGTCTTCTCGAGAAGCACAAGGTTAGTTCCTGAGAAGGAGGTCTTGGAATATTTTACCAATGATTCAAGCTTTCT
CTCATGCGTAGTTTTAAGACAAACATTCTAACTTCAATAGGATTACTCGCTCCGTGCCAAAGATTACAATGCCAA
GAAGGCTAAGCTGAAGCGCCTCGAAGAGAAGGTGCGGGATCGCAACCCCGATGAGTTCGCCTTCGGTATGATGGG
AGAGAAGAACCGGACCCAGGGTCGGCACGGACGTGGCAAAGGCACAGCACGAGACTCTGCCGCAGCGCAGGGACT
GAGCCACGAGGCAATCAAGCTGCTCAAGACGCAAGATAAGGGTTATCTTCGGACGGTTGGCGAGCGGGTACGCCG
CGAGATTGAGCGCCTGGAGCGCGACGTGAAATTGCAAGATGGCATGAACAAGGTCCTTGGCAAAAAGGATGGGAA
AAAGGACGAGAGCGACGATGACGGGTTTGACGACGACTCCGATTTCGATTTCGGGGCGCCGGTGCAATCGAAACC
AACCAGGGTGGTGTTTGCCGATGATAGACAAGACCAACTGGCAATGAAGAAGCAGAAGATACAAAAAGAAGAACC
TGCGCTAGATTCAGAGGAAGAAGAGCAGACGTCAAGCAAGACCCGCAAGACACCTAAGCAGCTTGAGGCTGAGCG
GCAAGCACTTGTGGATGCTCGGCGGGCTCGCAAGCTCCGGAAACGAGCCATCGAGGCCCGACACAACAAGCTGAC
TGCGTTGCACAAGCAGTACGCCGAGATTCGGACCGCAGAGCAAGAGCTTGATTGGCAGCGGGCTAAGATGGAAAA
TTCCGTGGGAGGCACCAACAGGGACGGAATCAAGTGGAAGATCCGTGAGCGCAAGCGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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