Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g584.t1
Gene name
Locationscaffold_01:1507243..1508744
Strand+
Gene length (bp)1501
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 5.1E-29 262 416
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 4.4E-24 32 153
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 2.1E-24 157 250

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g584.t1
MAKILRPATAPYSEPLLPQLDIRNPYYTNLNHNLRATVREYIDIYITPYAAEWEEAGQVPEAVRRHYCKLGYSIV
HPLTSEEDSAGLSLPGNVPREKWDTWCSLIVTDELTRVGYVGVIWGLGGGNGIGCPPVARFGNDEQRKRWLPGVA
RGDIRFCLGITEPDAGSDVANIQTTAQRDGNHYIVNGAKKWITNGIWADYCTAAVRTGGPGRSGISLLVIPLATA
GVTRRRMHNSGVNASGSTFIEFEDVRVPVENLIGQENKGFPLIMSNFNPERLTLACASLRLSRVCAEDAYNYAIQ
RETFGSPLIEKQAIQSKIFKFGLMIEPAYAFMEQLVNILELTKDRPSDDVNIGGMTALLKVMSTRALEKSVREAQ
QIMGGAGYNKAGKGARIEQISRDARVHVVGGGSEEIMAGLALREETKAIRTRRKALEKRQSKV*
Coding >Pro_DTO377G3_2|g584.t1
ATGGCCAAAATCCTCCGCCCCGCAACAGCTCCGTACAGCGAGCCCCTTCTCCCGCAACTAGACATCCGCAACCCC
TACTATACAAACCTGAACCACAACCTGCGCGCCACCGTGCGCGAATATATCGATATATACATCACCCCCTACGCC
GCAGAGTGGGAAGAAGCAGGCCAAGTCCCCGAAGCCGTACGCCGGCACTATTGCAAGCTGGGCTATAGCATCGTG
CACCCCCTCACGAGCGAGGAGGACTCAGCCGGCCTCTCTCTGCCTGGGAATGTGCCGCGCGAGAAGTGGGATACG
TGGTGCTCACTTATTGTAACGGACGAGCTCACGCGCGTTGGATATGTCGGTGTGATTTGGGGGCTTGGTGGTGGT
AATGGGATTGGATGTCCGCCTGTTGCGCGTTTTGGGAATGATGAGCAGAGGAAGAGGTGGCTTCCTGGTGTTGCG
AGGGGGGATATTCGATTTTGTTTGGGGATTACCGAGCCGGATGCGGGCTCTGATGTTGCCAATATCCAGACTACA
GCCCAGCGGGATGGCAATCACTATATTGTGAATGGGGCGAAGAAATGGATTACCAATGGTATCTGGGCTGACTAT
TGCACTGCTGCTGTTAGGACCGGTGGTCCTGGAAGGTCTGGTATCAGCTTGCTTGTTATTCCCTTGGCTACTGCC
GGAGTGACTCGCAGGCGTATGCATAACTCGGGTGTGAATGCCAGTGGCTCAACCTTTATCGAGTTTGAAGATGTG
CGTGTTCCTGTCGAAAACCTCATCGGCCAAGAGAACAAAGGATTTCCCCTTATCATGTCGAACTTCAACCCAGAG
CGCCTTACTCTGGCGTGTGCGTCATTGCGACTCTCCCGAGTTTGTGCCGAAGATGCCTACAACTACGCCATCCAA
CGCGAGACCTTTGGATCCCCACTGATTGAAAAGCAAGCAATTCAATCCAAGATCTTCAAATTCGGCCTCATGATT
GAGCCAGCCTATGCCTTCATGGAACAGCTCGTGAACATCCTTGAACTTACCAAAGACCGTCCTTCCGACGACGTC
AACATTGGTGGTATGACTGCCTTGCTTAAAGTCATGTCGACCAGGGCTCTGGAGAAGAGTGTTCGAGAAGCACAG
CAGATTATGGGAGGTGCGGGCTATAACAAGGCTGGCAAAGGTGCTAGAATCGAGCAGATTAGTCGTGATGCTCGG
GTTCATGTAGTCGGCGGCGGAAGTGAGGAGATTATGGCGGGACTGGCGCTGAGGGAGGAGACAAAGGCTATTCGC
ACTCGGAGAAAGGCACTTGAGAAGAGACAGTCTAAAGTATGA
Transcript >Pro_DTO377G3_2|g584.t1
ATGGCCAAAATCCTCCGCCCCGCAACAGCTCCGTACAGCGAGCCCCTTCTCCCGCAACTAGACATCCGCAACCCC
TACTATACAAACCTGAACCACAACCTGCGCGCCACCGTGCGCGAATATATCGATATATACATCACCCCCTACGCC
GCAGAGTGGGAAGAAGCAGGCCAAGTCCCCGAAGCCGTACGCCGGCACTATTGCAAGCTGGGCTATAGCATCGTG
CACCCCCTCACGAGCGAGGAGGACTCAGCCGGCCTCTCTCTGCCTGGGAATGTGCCGCGCGAGAAGTGGGATACG
TGGTGCTCACTTATTGTAACGGACGAGCTCACGCGCGTTGGATATGTCGGTGTGATTTGGGGGCTTGGTGGTGGT
AATGGGATTGGATGTCCGCCTGTTGCGCGTTTTGGGAATGATGAGCAGAGGAAGAGGTGGCTTCCTGGTGTTGCG
AGGGGGGATATTCGATTTTGTTTGGGGATTACCGAGCCGGATGCGGGCTCTGATGTTGCCAATATCCAGACTACA
GCCCAGCGGGATGGCAATCACTATATTGTGAATGGGGCGAAGAAATGGATTACCAATGGTATCTGGGCTGACTAT
TGCACTGCTGCTGTTAGGACCGGTGGTCCTGGAAGGTCTGGTATCAGCTTGCTTGTTATTCCCTTGGCTACTGCC
GGAGTGACTCGCAGGCGTATGCATAACTCGGGTGTGAATGCCAGTGGCTCAACCTTTATCGAGTTTGAAGATGTG
CGTGTTCCTGTCGAAAACCTCATCGGCCAAGAGAACAAAGGATTTCCCCTTATCATGTCGAACTTCAACCCAGAG
CGCCTTACTCTGGCGTGTGCGTCATTGCGACTCTCCCGAGTTTGTGCCGAAGATGCCTACAACTACGCCATCCAA
CGCGAGACCTTTGGATCCCCACTGATTGAAAAGCAAGCAATTCAATCCAAGATCTTCAAATTCGGCCTCATGATT
GAGCCAGCCTATGCCTTCATGGAACAGCTCGTGAACATCCTTGAACTTACCAAAGACCGTCCTTCCGACGACGTC
AACATTGGTGGTATGACTGCCTTGCTTAAAGTCATGTCGACCAGGGCTCTGGAGAAGAGTGTTCGAGAAGCACAG
CAGATTATGGGAGGTGCGGGCTATAACAAGGCTGGCAAAGGTGCTAGAATCGAGCAGATTAGTCGTGATGCTCGG
GTTCATGTAGTCGGCGGCGGAAGTGAGGAGATTATGGCGGGACTGGCGCTGAGGGAGGAGACAAAGGCTATTCGC
ACTCGGAGAAAGGCACTTGAGAAGAGACAGTCTAAAGTATGA
Gene >Pro_DTO377G3_2|g584.t1
ATGGCCAAAATCCTCCGCCCCGCAACAGCTCCGTACAGCGAGCCCCTTCTCCCGCAACTAGACATCCGCAACCCC
TACTATACAAACCTGAACCACAACCTGCGCGCCACCGTGCGCGAATATATCGATATATACATCACCCCCTACGCC
GCAGAGTGGGAAGAAGCAGGCCAAGTCCCCGAAGCCGTACGCCGGCACTATTGCAAGCTGGGCTATAGCATCGTG
CACCCCCTCACGAGCGAGGAGGACTCAGCCGGCCTCTCTCTGCCTGGGAATGTGCCGCGCGAGAAGTGGGATACG
TGGTGCTCACTTATTGTAACGGACGAGCTCACGCGCGTTGGATATGTCGGTGTGATTTGGGGGCTTGGTGGTGGT
AATGGGATTGGATGTCCGCCTGTTGCGCGTTTTGGGAATGATGAGCAGAGGAAGAGGTGGCTTCCTGGTGTTGCG
AGGGGGGATATTCGATTTTGTTTGGGGATTACCGAGCCGGATGGTATGTGGATGTTTACTTCAGAGGTATAACTA
TCTTCAGGATATGGGTTGCTGACTTTGTTTACTTTTTGCAGCGGGCTCTGATGTTGCCAATATCCAGACTACAGC
CCAGCGGGATGGCAATCACTATATTGTGAATGGGGCGAAGAAATGGATTACCAATGGTATCTGGGCTGACTATTG
CACTGCTGCTGTTAGGACCGGTGGTCCTGGAAGGTCTGGTATCAGCTTGCTTGTTATTCCCTTGGCTACTGCCGG
AGTGACTCGCAGGCGTATGCATAACTCGGGTGTGAATGCCAGTGGTGGGTGCTTCTTTCTCAATATGACCTGTGA
AGAAAGACATCGCCAATCAACACAACTATAGGCTCAACCTTTATCGAGTTTGAAGATGTGCGTGTTCCTGTCGAA
AACCTCATCGGCCAAGAGAACAAAGGATTTCCCCTTATCATGTCGAGTGAGTTGCCTTACCAAGGGTCTGAATTG
GCTGCTAATATTTTCTTCAGACTTCAACCCAGAGCGCCTTACTCTGGCGTGTGCGTCATTGCGACTCTCCCGAGT
TTGTGCCGAAGATGCCTACAACTACGCCATCCAACGCGAGACCTTTGGATCCCCACTGATTGAAAAGCAAGCAAT
TCAATCCAAGATCTTCAAATTCGGCCTCATGATTGAGCCAGCCTATGCCTTCATGGAACAGCTCGTGAACATCCT
TGAACTTACCAAAGACCGTCCTTCCGACGACGTCAACATTGGTGGTATGACTGCCTTGCTTAAAGTCATGTCGAC
CAGGGCTCTGGAGAAGAGTGTTCGAGAAGCACAGCAGATTATGGGAGGTGCGGGCTATAACAAGGCTGGCAAAGG
TGCTAGAATCGAGCAGATTAGTCGTGATGCTCGGGTTCATGTAGTCGGCGGCGGAAGTGAGGAGATTATGGCGGG
ACTGGCGCTGAGGGAGGAGACAAAGGCTATTCGCACTCGGAGAAAGGCACTTGAGAAGAGACAGTCTAAAGTATG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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