Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5817.t1
Gene name
Locationscaffold_14:527982..529139
Strand+
Gene length (bp)1157
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 2.2E-05 281 303
PF00096 zf-C2H2 Zinc finger, C2H2 type 4.0E-03 309 333
PF12874 zf-met Zinc-finger of C2H2 type 1.8E-05 282 303

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5817.t1
MVMENQNRPYGGMSFDNVYHHTPPQFTDPWAHSSSHSTPPVYATSMGNGASMGLGQVKQEEVNRSAMSMPYPNIP
VSAPSMVTGSSYASAAYGPEVMGMQHEVARTTFDQAPSYTSAPPMSSFAPSSYAYAHAPIHPSAQDGRRISHSDA
ARVGASASAPTFGDALDASRGMVALSQDLTPRNIYGPGPRGTRGSADSYGFPSTQSSASSISSGGNYPYYSASVG
SVDSSVTDYSSTTSESYESRTLPRPTSLLAGSAPPGPQSMMSQFSSKMPSNTQKKHKCKVCDKRFTRPSSLQTHM
YSHTGEKPFACDVEGCGRHFSVVSNLRRHKKVHKGEKDPGSGDDDE*
Coding >Pro_DTO377G3_2|g5817.t1
ATGGTTATGGAAAATCAGAACCGTCCCTATGGCGGCATGAGCTTCGACAATGTCTATCATCACACCCCACCACAG
TTTACAGACCCGTGGGCACACAGTTCGTCGCATTCGACGCCCCCAGTCTATGCGACCTCCATGGGCAATGGCGCC
AGCATGGGGCTGGGCCAGGTCAAGCAGGAGGAAGTGAACCGCTCCGCCATGTCCATGCCCTATCCCAACATCCCC
GTGTCTGCCCCGTCAATGGTGACCGGGTCCAGCTACGCGAGCGCCGCCTATGGGCCCGAGGTAATGGGAATGCAA
CACGAGGTTGCGCGCACAACTTTCGACCAGGCTCCTTCCTACACCAGCGCTCCCCCAATGAGCAGCTTTGCACCT
TCCAGCTATGCCTACGCCCACGCCCCTATTCACCCATCCGCGCAAGACGGCCGCCGTATCTCGCACTCAGACGCC
GCTCGCGTTGGCGCTTCAGCTTCCGCCCCTACGTTCGGTGATGCCCTCGACGCCAGCCGCGGAATGGTCGCTCTC
AGCCAGGATCTGACTCCGCGCAACATCTACGGCCCCGGTCCTCGCGGCACGCGAGGCTCGGCCGATTCATACGGT
TTCCCTTCCACCCAATCCTCCGCCTCGTCTATCTCCTCCGGCGGCAACTACCCCTACTACAGCGCCTCGGTGGGC
TCCGTCGACTCCTCCGTGACCGACTACAGCTCCACAACTTCCGAGTCATACGAATCGCGCACTCTTCCCCGGCCC
ACTAGCCTTTTGGCCGGTAGTGCTCCCCCTGGCCCGCAATCGATGATGAGCCAGTTCAGCTCCAAGATGCCCTCC
AACACCCAGAAAAAGCACAAGTGCAAGGTCTGCGACAAGCGGTTCACGCGTCCATCTTCGCTCCAGACGCATATG
TACAGCCACACTGGCGAAAAGCCATTCGCGTGTGATGTTGAAGGCTGCGGGCGGCACTTCTCCGTTGTCTCAAAC
CTGCGCCGTCACAAGAAGGTCCACAAGGGCGAGAAGGATCCCGGCTCTGGCGATGACGACGAGTAA
Transcript >Pro_DTO377G3_2|g5817.t1
ATGGTTATGGAAAATCAGAACCGTCCCTATGGCGGCATGAGCTTCGACAATGTCTATCATCACACCCCACCACAG
TTTACAGACCCGTGGGCACACAGTTCGTCGCATTCGACGCCCCCAGTCTATGCGACCTCCATGGGCAATGGCGCC
AGCATGGGGCTGGGCCAGGTCAAGCAGGAGGAAGTGAACCGCTCCGCCATGTCCATGCCCTATCCCAACATCCCC
GTGTCTGCCCCGTCAATGGTGACCGGGTCCAGCTACGCGAGCGCCGCCTATGGGCCCGAGGTAATGGGAATGCAA
CACGAGGTTGCGCGCACAACTTTCGACCAGGCTCCTTCCTACACCAGCGCTCCCCCAATGAGCAGCTTTGCACCT
TCCAGCTATGCCTACGCCCACGCCCCTATTCACCCATCCGCGCAAGACGGCCGCCGTATCTCGCACTCAGACGCC
GCTCGCGTTGGCGCTTCAGCTTCCGCCCCTACGTTCGGTGATGCCCTCGACGCCAGCCGCGGAATGGTCGCTCTC
AGCCAGGATCTGACTCCGCGCAACATCTACGGCCCCGGTCCTCGCGGCACGCGAGGCTCGGCCGATTCATACGGT
TTCCCTTCCACCCAATCCTCCGCCTCGTCTATCTCCTCCGGCGGCAACTACCCCTACTACAGCGCCTCGGTGGGC
TCCGTCGACTCCTCCGTGACCGACTACAGCTCCACAACTTCCGAGTCATACGAATCGCGCACTCTTCCCCGGCCC
ACTAGCCTTTTGGCCGGTAGTGCTCCCCCTGGCCCGCAATCGATGATGAGCCAGTTCAGCTCCAAGATGCCCTCC
AACACCCAGAAAAAGCACAAGTGCAAGGTCTGCGACAAGCGGTTCACGCGTCCATCTTCGCTCCAGACGCATATG
TACAGCCACACTGGCGAAAAGCCATTCGCGTGTGATGTTGAAGGCTGCGGGCGGCACTTCTCCGTTGTCTCAAAC
CTGCGCCGTCACAAGAAGGTCCACAAGGGCGAGAAGGATCCCGGCTCTGGCGATGACGACGAGTAA
Gene >Pro_DTO377G3_2|g5817.t1
ATGGTTATGGAAAATCAGAACCGTCCCTATGGCGGCATGAGCTTCGACAATGTCTATCATCACACCCCACCACAG
TTTACAGACCCGTGGGCACACAGTTCGTCGCATTCGACGCCCCCAGTCTATGCGACCTCCATGGGCAATGGCGCC
AGCATGGGGCTGGGCCAGGTCAAGCAGGAGGAAGTGAACCGCTCCGCCATGTCCATGCCCTATCCCAACATCCCC
GTGTCTGCCCCGTCAATGGTGACCGGGTCCAGCTACGCGAGCGCCGCCTATGGGCCCGAGGTAATGGGAATGCAA
CACGAGGTTGCGCGCACAACTTTCGACCAGGCTCCTTCCTACACCAGCGCTCCCCCAATGAGCAGCTTTGCACCT
TCCAGCTATGCCTACGCCCACGCCCCTATTCACCCATCCGCGCAAGACGGCCGCCGTATCTCGCACTCGTAAGTT
GATTCGAGTCTGCATTACATGGAATCGCAAAGACTTACACAATCCACAGAGACGCCGCTCGCGTTGGCGCTTCAG
CTTCCGCCCCTACGTTCGGTGATGCCCTCGACGCCAGCCGCGGAATGGTCGCTCTCAGCCAGGATCTGACTCCGC
GCAACATCTACGGCCCCGGTCCTCGCGGCACGCGAGGCTCGGCCGATTCATACGGTTTCCCTTCCACCCAATCCT
CCGCCTCGTCTATCTCCTCCGGCGGCAACTACCCCTACTACAGCGCCTCGGTGGGCTCCGTCGACTCCTCCGTGA
CCGACTACAGCTCCACAACTTCCGAGTCATACGAATCGCGCACTCTTCCCCGGCCCACTAGCCTTTTGGCCGGTA
GTGCTCCCCCTGGCCCGCAATCGATGATGAGCCAGTTCAGCTCCAAGATGCCCTCCAACACCCAGAAAAAGCACA
AGTGCAAGGTCTGCGACAAGCGGTTCACGCGTCCATCTTCGCTCCAGACGCATATGTACAGCCACACTGGCGAAA
AGCGTGAGTTTTTTTATTGTTCCGTGAGAACTAAATCATTCGAATCATACTGACATTTTCCAGCATTCGCGTGTG
ATGTTGAAGGCTGCGGGCGGCACTTCTCCGTTGTCTCAAACCTGCGCCGTCACAAGAAGGTCCACAAGGGCGAGA
AGGATCCCGGCTCTGGCGATGACGACGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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