Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g5804.t1
Gene name
Location	scaffold_14:487932..490394
Strand	-
Gene length (bp)	2462
Transcript length (bp)	2214
Coding sequence length (bp)	2214
Protein length (aa)	738

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01480	PWI	PWI domain	1.5E-11	11	73
PF00076	RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	2.5E-05	370	413

GO

GO Term	Description	Terminal node
GO:0006397	mRNA processing	Yes
GO:0003723	RNA binding	Yes
GO:0008152	metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0008150	biological_process	No
GO:0006396	RNA processing	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0016071	mRNA metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0044238	primary metabolic process	No
GO:0005488	binding	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:1901363	heterocyclic compound binding	No
GO:0090304	nucleic acid metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0009987	cellular process	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	2860
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g3301.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g7841.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g7662.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g8614.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g8757.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g3482.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g2262.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g596.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g1784.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g4438.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g608.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g4944.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g1110.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g8469.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g6329.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g4260.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g7030.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g3446.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g2361.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g6356.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g4433.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g1348.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g5529.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g368.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g2911.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g8033.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g8972.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g2053.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g4945.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g1712.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g775.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g1709.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g596.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g5804.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g5804.t1 MQFTDAEAADVKKWVVKKLEDISDADSDVLADYVLALVRSDAPAEEIKKISVENLEDFLREHTQPFVTELFTTFG PKQPAPPTPAPAPQPQRQPQPAAQIPLSQPPENAPSGPRATVTPGSANRKRTFNEGFQGEPDHDDSGFQNRAIKT ARRGGRGGSRGDFMGGQHMQAGQQYPPQQAGQLFPLQQQGQQFPSQQQGQQFPPHQQGQQFPPQQPGGFPMMPGF PPFDPNDPMAAMMAMQSMQGMGFPPMPGMPMPGMPGPPGQPGADQIPKSNQRCPFYDTQGICYLGNTCPYQHGEG VSKDDEYDPKTAGTHAQRGGAPSRGDRGRGRGRGGFSGRGRGRSDFSSAGPNEDQSVTTIVVEQIPDDKFNEDSV REFFSEFGKITEVSLQPYKKVALVKYETFPEAKAAWSSPKVIFDNRFVKVYWYKPNRDETHDSAQPEAPAFNKEE FEKQQQEAQRAHEEKMKKRQETEAAKQALERQRDELIKKQQEERARLMQRLGGTTDTNGATGGGDAMATEPPADE NISAETKQLRAQLAALEAEAKSLGLDPAADPSARGGYRGRGGFRGRGTYRGRGAYDPNFRGGYRGRGGFAARGRG GVLRLDNRPRRVAVSGVELNSDKDEALRQHLMGVGEYESIEAHPDQPNSVVVAFKERFQAEKLMFSPWNIPSVGE VQLTWVPNPPVVLPTAGSSTEFKGGIGQDEPEDTVMSSSSVANSAPARDMDYDVAEDDSWGA*
Coding	>Pro_DTO377G3_2|g5804.t1 ATGCAGTTTACTGATGCAGAAGCCGCTGACGTAAAGAAATGGGTGGTAAAAAAACTGGAGGACATCTCGGATGCC GACTCCGACGTGCTCGCAGACTATGTTTTGGCGCTAGTTAGGTCCGATGCGCCAGCCGAGGAAATCAAGAAGATC TCGGTGGAAAACTTGGAGGATTTCCTGCGCGAACACACTCAACCGTTCGTTACCGAGCTCTTTACAACATTCGGT CCCAAACAACCCGCACCTCCTACGCCCGCGCCTGCACCCCAGCCTCAGCGCCAGCCCCAACCTGCTGCCCAGATT CCTTTGTCACAGCCTCCTGAGAATGCCCCCAGCGGCCCGAGAGCTACCGTCACCCCGGGCAGTGCCAACCGGAAA CGAACTTTCAATGAGGGATTCCAGGGGGAGCCGGATCACGACGATAGTGGGTTCCAGAATCGCGCTATCAAGACT GCACGGCGTGGTGGGCGCGGAGGTAGTCGCGGCGACTTCATGGGCGGACAACATATGCAAGCGGGTCAACAATAT CCTCCACAACAAGCGGGTCAACTGTTTCCTCTGCAGCAACAAGGCCAGCAATTCCCCTCTCAGCAACAAGGCCAG CAATTCCCCCCGCATCAGCAGGGCCAACAGTTCCCTCCGCAGCAGCCCGGTGGCTTCCCTATGATGCCAGGTTTC CCACCGTTCGACCCCAATGACCCTATGGCAGCAATGATGGCTATGCAGAGTATGCAAGGTATGGGATTCCCGCCG ATGCCGGGGATGCCTATGCCCGGGATGCCCGGTCCTCCCGGTCAGCCAGGAGCCGATCAGATCCCGAAAAGCAAC CAGCGATGTCCATTCTATGATACCCAAGGTATCTGTTACCTAGGAAACACTTGCCCTTACCAGCACGGCGAGGGA GTCTCGAAAGACGATGAATATGACCCCAAGACCGCGGGTACGCATGCGCAGCGGGGCGGTGCTCCTTCGCGCGGT GACCGTGGCCGCGGCCGTGGTCGCGGCGGGTTCAGCGGACGAGGACGCGGCCGGTCCGATTTCTCATCGGCAGGA CCTAATGAAGATCAGTCTGTTACGACTATTGTTGTTGAGCAGATTCCCGACGACAAGTTCAACGAGGATTCTGTG CGCGAGTTCTTCTCCGAGTTCGGTAAGATCACCGAGGTTTCTTTGCAACCCTACAAAAAGGTGGCTTTGGTCAAA TACGAGACTTTCCCGGAAGCCAAGGCTGCGTGGTCTAGTCCCAAGGTTATCTTCGACAACCGCTTCGTGAAGGTT TACTGGTACAAACCGAATCGCGATGAGACGCACGACAGTGCACAACCGGAGGCCCCAGCCTTCAACAAAGAAGAG TTCGAGAAGCAACAACAAGAAGCACAGAGGGCGCACGAGGAGAAAATGAAAAAGCGACAGGAGACCGAAGCAGCC AAGCAGGCTCTAGAACGCCAGCGCGATGAACTTATCAAGAAACAGCAGGAGGAGCGGGCCCGTCTCATGCAGCGA CTTGGAGGCACGACAGACACAAACGGTGCCACCGGTGGTGGAGACGCTATGGCCACCGAGCCTCCAGCTGACGAG AATATCAGTGCTGAGACGAAACAGCTGCGAGCTCAACTGGCTGCTCTCGAGGCGGAGGCAAAGAGTCTTGGTCTC GACCCTGCGGCGGACCCTTCAGCGCGGGGTGGCTACCGGGGTCGTGGTGGCTTCCGCGGCCGAGGCACGTACCGT GGACGCGGCGCTTACGATCCCAACTTCCGCGGAGGATATCGTGGACGCGGTGGATTTGCGGCTCGGGGACGGGGA GGTGTACTGCGTCTGGATAACCGGCCTCGACGAGTCGCCGTATCGGGCGTTGAGCTCAACTCAGACAAGGACGAG GCATTGCGTCAGCACCTGATGGGCGTTGGCGAATACGAATCCATCGAGGCACACCCAGACCAGCCAAACTCGGTC GTGGTGGCATTCAAAGAGCGCTTCCAGGCCGAGAAGCTAATGTTCTCCCCGTGGAACATCCCCTCCGTGGGCGAG GTTCAACTCACCTGGGTGCCCAATCCGCCCGTTGTACTTCCTACCGCTGGGTCATCCACGGAATTCAAGGGTGGT ATTGGACAGGACGAACCGGAAGACACAGTCATGTCGTCTTCGTCGGTGGCCAACAGCGCTCCTGCGCGGGATATG GATTACGACGTTGCGGAGGATGACAGCTGGGGCGCTTAA
Transcript	>Pro_DTO377G3_2|g5804.t1 ATGCAGTTTACTGATGCAGAAGCCGCTGACGTAAAGAAATGGGTGGTAAAAAAACTGGAGGACATCTCGGATGCC GACTCCGACGTGCTCGCAGACTATGTTTTGGCGCTAGTTAGGTCCGATGCGCCAGCCGAGGAAATCAAGAAGATC TCGGTGGAAAACTTGGAGGATTTCCTGCGCGAACACACTCAACCGTTCGTTACCGAGCTCTTTACAACATTCGGT CCCAAACAACCCGCACCTCCTACGCCCGCGCCTGCACCCCAGCCTCAGCGCCAGCCCCAACCTGCTGCCCAGATT CCTTTGTCACAGCCTCCTGAGAATGCCCCCAGCGGCCCGAGAGCTACCGTCACCCCGGGCAGTGCCAACCGGAAA CGAACTTTCAATGAGGGATTCCAGGGGGAGCCGGATCACGACGATAGTGGGTTCCAGAATCGCGCTATCAAGACT GCACGGCGTGGTGGGCGCGGAGGTAGTCGCGGCGACTTCATGGGCGGACAACATATGCAAGCGGGTCAACAATAT CCTCCACAACAAGCGGGTCAACTGTTTCCTCTGCAGCAACAAGGCCAGCAATTCCCCTCTCAGCAACAAGGCCAG CAATTCCCCCCGCATCAGCAGGGCCAACAGTTCCCTCCGCAGCAGCCCGGTGGCTTCCCTATGATGCCAGGTTTC CCACCGTTCGACCCCAATGACCCTATGGCAGCAATGATGGCTATGCAGAGTATGCAAGGTATGGGATTCCCGCCG ATGCCGGGGATGCCTATGCCCGGGATGCCCGGTCCTCCCGGTCAGCCAGGAGCCGATCAGATCCCGAAAAGCAAC CAGCGATGTCCATTCTATGATACCCAAGGTATCTGTTACCTAGGAAACACTTGCCCTTACCAGCACGGCGAGGGA GTCTCGAAAGACGATGAATATGACCCCAAGACCGCGGGTACGCATGCGCAGCGGGGCGGTGCTCCTTCGCGCGGT GACCGTGGCCGCGGCCGTGGTCGCGGCGGGTTCAGCGGACGAGGACGCGGCCGGTCCGATTTCTCATCGGCAGGA CCTAATGAAGATCAGTCTGTTACGACTATTGTTGTTGAGCAGATTCCCGACGACAAGTTCAACGAGGATTCTGTG CGCGAGTTCTTCTCCGAGTTCGGTAAGATCACCGAGGTTTCTTTGCAACCCTACAAAAAGGTGGCTTTGGTCAAA TACGAGACTTTCCCGGAAGCCAAGGCTGCGTGGTCTAGTCCCAAGGTTATCTTCGACAACCGCTTCGTGAAGGTT TACTGGTACAAACCGAATCGCGATGAGACGCACGACAGTGCACAACCGGAGGCCCCAGCCTTCAACAAAGAAGAG TTCGAGAAGCAACAACAAGAAGCACAGAGGGCGCACGAGGAGAAAATGAAAAAGCGACAGGAGACCGAAGCAGCC AAGCAGGCTCTAGAACGCCAGCGCGATGAACTTATCAAGAAACAGCAGGAGGAGCGGGCCCGTCTCATGCAGCGA CTTGGAGGCACGACAGACACAAACGGTGCCACCGGTGGTGGAGACGCTATGGCCACCGAGCCTCCAGCTGACGAG AATATCAGTGCTGAGACGAAACAGCTGCGAGCTCAACTGGCTGCTCTCGAGGCGGAGGCAAAGAGTCTTGGTCTC GACCCTGCGGCGGACCCTTCAGCGCGGGGTGGCTACCGGGGTCGTGGTGGCTTCCGCGGCCGAGGCACGTACCGT GGACGCGGCGCTTACGATCCCAACTTCCGCGGAGGATATCGTGGACGCGGTGGATTTGCGGCTCGGGGACGGGGA GGTGTACTGCGTCTGGATAACCGGCCTCGACGAGTCGCCGTATCGGGCGTTGAGCTCAACTCAGACAAGGACGAG GCATTGCGTCAGCACCTGATGGGCGTTGGCGAATACGAATCCATCGAGGCACACCCAGACCAGCCAAACTCGGTC GTGGTGGCATTCAAAGAGCGCTTCCAGGCCGAGAAGCTAATGTTCTCCCCGTGGAACATCCCCTCCGTGGGCGAG GTTCAACTCACCTGGGTGCCCAATCCGCCCGTTGTACTTCCTACCGCTGGGTCATCCACGGAATTCAAGGGTGGT ATTGGACAGGACGAACCGGAAGACACAGTCATGTCGTCTTCGTCGGTGGCCAACAGCGCTCCTGCGCGGGATATG GATTACGACGTTGCGGAGGATGACAGCTGGGGCGCTTAA
Gene	>Pro_DTO377G3_2|g5804.t1 ATGCAGTTTACTGATGCAGAAGCCGCTGACGTAAAGAAATGGGTGGTAAAAAAACTGGAGGACATGTGAGTTGAT CAGGCACCAGAATCGGGGACTGAGACCCGTGGATTGCCCTAGGGGAAGCAAACTGAGACTAATTGGCTTTATTCT GTCTTTAGCTCGGATGCCGACTCCGACGTGCTCGCAGACTATGTTTTGGCGCTAGTTAGGTCCGATGCGCCAGCC GAGGAAATCAAGAAGATCTCGGTGGAAAACTTGGAGGATTTCCTGCGCGAACGTGAGTCCATATCTCAATCCCGA ATTGTTTCATACAACTAACAACTCTTAGACACTCAACCGTTCGTTACCGAGCTCTTTACAACATTCGGTCCCAAA CAACCCGCACCTCCTACGCCCGCGCCTGCACCCCAGCCTCAGCGCCAGCCCCAACCTGCTGCCCAGATTCCTTTG TCACAGCCTCCTGAGAATGCCCCCAGCGGCCCGAGAGCTACCGTCACCCCGGGCAGTGCCAACCGGAAACGAACT TTCAATGAGGGATTCCAGGGGGAGCCGGATCACGACGATAGTGGGTTCCAGAATCGCGCTATCAAGACTGCACGG CGTGGTGGGCGCGGAGGTAGTCGCGGCGACTTCATGGGCGGACAACATATGCAAGCGGGTCAACAATATCCTCCA CAACAAGCGGGTCAACTGTTTCCTCTGCAGCAACAAGGCCAGCAATTCCCCTCTCAGCAACAAGGCCAGCAATTC CCCCCGCATCAGCAGGGCCAACAGTTCCCTCCGCAGCAGCCCGGTGGCTTCCCTATGATGCCAGGTTTCCCACCG TTCGACCCCAATGACCCTATGGCAGCAATGATGGCTATGCAGAGTATGCAAGGTATGGGATTCCCGCCGATGCCG GGGATGCCTATGCCCGGGATGCCCGGTCCTCCCGGTCAGCCAGGAGCCGATCAGATCCCGAAAAGCAACCAGCGA TGTCCATTCTATGATACCCAAGGTATCTGTTACCTAGGAAACACTTGCCCTTACCAGCACGGCGAGGGAGTCTCG AAAGACGATGGTAAGAACAATTCATTTATCCTAGATATACCATTGCTAACAATCGCAGAATATGACCCCAAGACC GCGGGTACGCATGCGCAGCGGGGCGGTGCTCCTTCGCGCGGTGACCGTGGCCGCGGCCGTGGTCGCGGCGGGTTC AGCGGACGAGGACGCGGCCGGTCCGATTTCTCATCGGCAGGACCTAATGAAGATCAGTCTGTTACGACTATTGTT GTTGAGCAGATTCCCGACGACAAGTTCAACGAGGATTCTGTGCGCGAGTTCTTCTCCGAGTTCGGTAAGATCACC GAGGTTTCTTTGCAACCCTACAAAAAGGTGGCTTTGGTCAAATACGAGACTTTCCCGGAAGCCAAGGCTGCGTGG TCTAGTCCCAAGGTTATCTTCGACAACCGCTTCGTGAAGGTTTACTGGTACAAACCGAATCGCGATGAGACGCAC GACAGTGCACAACCGGAGGCCCCAGCCTTCAACAAAGAAGAGTTCGAGAAGCAACAACAAGAAGCACAGAGGGCG CACGAGGAGAAAATGAAAAAGCGACAGGAGACCGAAGCAGCCAAGCAGGCTCTAGAACGCCAGCGCGATGAACTT ATCAAGAAACAGCAGGAGGAGCGGGCCCGTCTCATGCAGCGACTTGGAGGCACGACAGACACAAACGGTGCCACC GGTGGTGGAGACGCTATGGCCACCGAGCCTCCAGCTGACGAGAATATCAGTGCTGAGACGAAACAGCTGCGAGCT CAACTGGCTGCTCTCGAGGCGGAGGCAAAGAGTCTTGGTCTCGACCCTGCGGCGGACCCTTCAGCGCGGGGTGGC TACCGGGGTCGTGGTGGCTTCCGCGGCCGAGGCACGTACCGTGGACGCGGCGCTTACGATCCCAACTTCCGCGGA GGATATCGTGGACGCGGTGGATTTGCGGCTCGGGGACGGGGAGGTGTACTGCGTCTGGATAACCGGCCTCGACGA GTCGCCGTATCGGGCGTTGAGCTCAACTCAGACAAGGACGAGGCATTGCGTCAGCACCTGATGGTAAGTTATGTA TCTTTCTAACCAAGCAAAGCGTGTACTAATTTGTTGTGTTCTAGGGCGTTGGCGAATACGAATCCATCGAGGCAC ACCCAGACCAGCCAAACTCGGTCGTGGTGGCATTCAAAGAGCGCTTCCAGGCCGAGAAGCTAATGTTCTCCCCGT GGAACATCCCCTCCGTGGGCGAGGTTCAACTCACCTGGGTGCCCAATCCGCCCGTTGTACTTCCTACCGCTGGGT CATCCACGGAATTCAAGGGTGGTATTGGACAGGACGAACCGGAAGACACAGTCATGTCGTCTTCGTCGGTGGCCA ACAGCGCTCCTGCGCGGGATATGGATTACGACGTTGCGGAGGATGACAGCTGGGGCGCTTAA