Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5786.t1
Gene name
Locationscaffold_14:442788..443932
Strand+
Gene length (bp)1144
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 4.0E-14 25 155
PF08659 KR KR domain 2.8E-09 26 119

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5786.t1
MSALSFLYSQLFVEPPVPTHDFQGQTVIITGSNRGIGFEAARHLLRLNVSRLILAARSAEKGQIAADTLEQLTGR
SGVIQVEELDMANQESVQEFATRMEMCRIDAVLLNAGIYTHDFVWADNHESTLTVNVINTFLLAILLLPALRRSS
KTWVIQPCISFVASDRHVMYDLPEWKTQNTFQVLNDRQQARMHERYPISKLLEILLARAMAKQLDSNPPNGTSNI
IVNSFTPGYCTSGLIENVHGITGFALWLLSKATARTTEVGGRTLVAAIAQGDKSHGKYLNDGHIDESALSPFVRS
QEGILAMEKLWEELMEILEQKRPGIGLLLSPVP*
Coding >Pro_DTO377G3_2|g5786.t1
ATGTCGGCGCTTTCGTTCCTCTACTCTCAGCTCTTCGTCGAGCCGCCAGTTCCCACGCATGACTTCCAAGGCCAA
ACTGTTATCATCACTGGATCTAACAGGGGCATCGGTTTTGAGGCTGCCCGTCATTTGTTGAGATTGAATGTGAGT
CGACTCATATTAGCTGCACGGTCAGCTGAGAAAGGCCAGATAGCCGCGGATACACTCGAACAGTTGACGGGGCGA
TCTGGAGTCATCCAAGTCGAGGAACTGGATATGGCCAATCAAGAGTCAGTGCAGGAATTTGCTACCCGAATGGAA
ATGTGTCGAATAGACGCCGTTCTGCTAAATGCAGGTATCTACACCCATGACTTTGTTTGGGCCGACAATCATGAA
AGCACGTTGACCGTGAACGTGATTAATACGTTTTTGCTGGCTATACTGCTTCTTCCAGCACTCAGACGCTCATCC
AAAACATGGGTGATTCAGCCCTGCATCAGTTTCGTGGCATCCGACAGGCACGTAATGTATGATCTCCCAGAGTGG
AAAACACAAAACACCTTCCAAGTTTTGAATGATCGACAGCAAGCCAGGATGCATGAAAGGTATCCCATCTCCAAA
TTGTTGGAGATACTACTTGCGAGGGCGATGGCAAAACAACTTGATTCAAACCCTCCTAACGGCACCAGCAATATA
ATTGTCAATTCATTCACACCTGGCTACTGCACTTCTGGTCTCATCGAGAATGTGCACGGGATCACAGGGTTCGCG
CTCTGGCTTCTGAGCAAGGCCACCGCTCGGACGACAGAAGTTGGAGGTCGCACATTGGTCGCAGCTATTGCGCAA
GGGGACAAAAGTCATGGAAAGTACCTAAATGACGGCCATATTGATGAATCAGCATTGTCTCCATTCGTAAGAAGT
CAAGAAGGCATATTGGCGATGGAGAAGCTATGGGAAGAACTGATGGAAATTTTAGAGCAGAAGCGACCTGGAATT
GGTCTACTCCTCAGTCCTGTACCATAA
Transcript >Pro_DTO377G3_2|g5786.t1
ATGTCGGCGCTTTCGTTCCTCTACTCTCAGCTCTTCGTCGAGCCGCCAGTTCCCACGCATGACTTCCAAGGCCAA
ACTGTTATCATCACTGGATCTAACAGGGGCATCGGTTTTGAGGCTGCCCGTCATTTGTTGAGATTGAATGTGAGT
CGACTCATATTAGCTGCACGGTCAGCTGAGAAAGGCCAGATAGCCGCGGATACACTCGAACAGTTGACGGGGCGA
TCTGGAGTCATCCAAGTCGAGGAACTGGATATGGCCAATCAAGAGTCAGTGCAGGAATTTGCTACCCGAATGGAA
ATGTGTCGAATAGACGCCGTTCTGCTAAATGCAGGTATCTACACCCATGACTTTGTTTGGGCCGACAATCATGAA
AGCACGTTGACCGTGAACGTGATTAATACGTTTTTGCTGGCTATACTGCTTCTTCCAGCACTCAGACGCTCATCC
AAAACATGGGTGATTCAGCCCTGCATCAGTTTCGTGGCATCCGACAGGCACGTAATGTATGATCTCCCAGAGTGG
AAAACACAAAACACCTTCCAAGTTTTGAATGATCGACAGCAAGCCAGGATGCATGAAAGGTATCCCATCTCCAAA
TTGTTGGAGATACTACTTGCGAGGGCGATGGCAAAACAACTTGATTCAAACCCTCCTAACGGCACCAGCAATATA
ATTGTCAATTCATTCACACCTGGCTACTGCACTTCTGGTCTCATCGAGAATGTGCACGGGATCACAGGGTTCGCG
CTCTGGCTTCTGAGCAAGGCCACCGCTCGGACGACAGAAGTTGGAGGTCGCACATTGGTCGCAGCTATTGCGCAA
GGGGACAAAAGTCATGGAAAGTACCTAAATGACGGCCATATTGATGAATCAGCATTGTCTCCATTCGTAAGAAGT
CAAGAAGGCATATTGGCGATGGAGAAGCTATGGGAAGAACTGATGGAAATTTTAGAGCAGAAGCGACCTGGAATT
GGTCTACTCCTCAGTCCTGTACCATAA
Gene >Pro_DTO377G3_2|g5786.t1
ATGTCGGCGCTTTCGTTCCTCTACTCTCAGCTCTTCGTCGAGCCGCCAGTTCCCACGCATGACTTCCAAGGCCAA
ACTGTTATCATCACTGGATCTAACAGGGGCATCGGTTTTGAGGCTGCCCGTCATTTGTTGAGATTGAATGTGAGT
CGACTCATATTAGCTGCACGGTCAGCTGAGAAAGGCCAGATAGCCGCGGATACACTCGAACAGTTGACGGGGCGA
TCTGGAGTCATCCAAGTCGAGGAACTGGATATGGCCAATCAAGAGTCAGTGCAGGAATTTGCTACCCGAATGGAA
ATGTGTCGAATAGACGCCGTTCTGCTAAATGCAGGTATCTACACCCATGACTTTGTTTGGGCCGACAATCATGAA
AGCACGTTGACCGTGAACGTGATTAATACGTTTTTGCTGGCTATACTGCTTCTTCCAGCACTCAGACGCTCATCC
AAAACATGGGTGATTCAGCCCTGCATCAGTTTCGTGGCATCCGACAGGCACGTAATGTATGATCTCCCAGAGTGG
AAAACACAAAACACCTTCCAAGTTTTGAATGATCGACAGCAAGCCAGGATGCATGAAAGGTGAGTTCAATCTATT
GTCTTTTACACATTGCAAACAAGGCCGAAAAGAACTGATGTAACATTCTCAGGTATCCCATCTCCAAATTGTTGG
AGATACTACTTGCGAGGGCGATGGCAAAACAACTTGATTCAAACCCTCCTAACGGCACCAGCAATATAATTGTCA
ATTCATTCACACCTGGCTACTGCACTTCTGGTCTCATCGAGAATGTGCACGGGATCACAGGGTTCGCGCTCTGGC
TTCTGAGCAAGGCCACCGCTCGGACGACAGAAGTTGGAGGTCGCACATTGGTCGCAGCTATTGCGCAAGGGGACA
AAAGTCATGGAAAGTACCTAAATGACGGCCATATTGATGAGTATGAACCCTTCCGAGAATATCTCTCTTCATACA
ATTTTCAAGCCGTGGCTGACCCATGCCTTTTATCATCAGATCAGCATTGTCTCCATTCGTAAGAAGTCAAGAAGG
CATATTGGCGATGGAGAAGCTATGGGAAGAACTGATGGAAATTTTAGAGCAGAAGCGACCTGGAATTGGTCTACT
CCTCAGTCCTGTACCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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