Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g5746.t1
Gene name
Location	scaffold_14:312806..315144
Strand	-
Gene length (bp)	2338
Transcript length (bp)	2193
Coding sequence length (bp)	2193
Protein length (aa)	731

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09402	MSC	Man1-Src1p-C-terminal domain	1.7E-106	347	670
PF12949	HeH	HeH/LEM domain	4.5E-16	14	48

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 38	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	550	572	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	46.30	28.24	64.36
5d_25C	Five days - 25 degrees Celsius	49.82	30.47	69.17
7d_25C	Seven days - 25 degrees Celsius	50.13	30.66	69.59
10d_25C	Ten days - 25 degrees Celsius	59.48	36.52	82.43
7d_15C	Seven days - 15 degrees Celsius	63.33	38.90	87.76
7d_30C	Seven days - 30 degrees Celsius	51.20	31.33	71.08

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.812019	no
3d_25C	7d_25C	0.787478	no
3d_25C	7d_15C	0.156573	no
3d_25C	7d_30C	0.723246	no
3d_25C	10d_25C	0.281890	no
5d_25C	7d_25C	0.986811	no
5d_25C	7d_15C	0.296237	no
5d_25C	7d_30C	0.934919	no
5d_25C	10d_25C	0.473351	no
7d_25C	7d_15C	0.304807	no
7d_25C	7d_30C	0.950544	no
7d_25C	10d_25C	0.484473	no
7d_15C	7d_30C	0.372381	no
7d_15C	10d_25C	0.837304	no
7d_30C	10d_25C	0.553577	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5746.t1 MADELEYLHPDFDLNSLTVPRLRSILVNHDVPYPASAKKAQLIGILEDEVLPQARKLLRDRDRVRRTSAGITDMG SRSTSVASDVNDRESMPPPPTPSTVGSTSRSMRGTSRRSTRHSTVDTDDGLEPATPIRNTKRTSVARSVGKHART SDTETGDDTLATPIAATRPTPRKSTARKIGRSEILPSTELDEHTRIKSEPRNESMFTDDNPFQSGSPEAPKSARM SYDGKRKSVSRLSTDSPARGRGLRSRKSATPSNVQQDDGFQPPKRDSFDFASRLMPPQEEPEEESDESEDDEGSE IGAGEEFTPEEQLAMSMEDDQYSPQIQARRRPQKQSTLSRLAPWVVILSLVGSFGTWWRKEKLEIGYCGLGKPTW SLADTKVPEWANVLEPRCEPCPSHAFCYPDFVVRCENDFLLKPHPLALGGLVPLPPTCEPDSEKERRVKAVADKA VEELRERRAKWECGQLKEDGKGARSPDISEPELREEVAKKRRKGMSDTEFDELWKGAIGEILEKDEVISKTKQNS AILILSSTSIARLPLACAVRRYFRLTLLAYRLPISLLIMTIGLLVYARARVLARRSDIARVPELVATTLDRLSTQ AALYARGDAKEPHIAIGQLRDDVLRFELQGKRREELWRRVRSFVEGNANVRASVREGRSGDVSRVWEWIGGINAV GEPEHIGRRESARFSVPSPSGNIVTSPQTPASESQPEPISSPRESRRWDESRPIY*
Coding	>Pro_DTO377G3_2\|g5746.t1 ATGGCGGATGAACTGGAATATCTCCATCCAGATTTCGATCTGAACTCTCTCACCGTGCCTCGTCTCCGCTCGATC CTTGTCAACCACGATGTTCCCTACCCTGCCTCTGCAAAGAAGGCTCAACTGATCGGCATCCTCGAAGATGAAGTT CTTCCGCAAGCCAGAAAACTCTTGCGTGACCGCGACAGGGTTCGACGGACCAGTGCAGGTATTACAGATATGGGC AGTCGGTCTACATCGGTGGCAAGCGACGTGAACGACAGAGAGTCGATGCCTCCTCCACCCACACCCTCAACAGTC GGATCCACAAGCAGAAGCATGCGAGGCACATCGCGTCGCAGCACCCGTCACTCAACGGTAGATACAGATGATGGT CTGGAACCTGCCACACCTATAAGGAACACAAAACGCACGAGCGTCGCTCGCTCGGTGGGTAAACACGCTCGCACA TCTGACACGGAAACCGGCGACGACACACTCGCGACTCCAATCGCTGCTACCCGTCCTACGCCTCGCAAGTCTACA GCTAGAAAAATCGGACGGAGCGAGATCCTCCCTTCGACAGAACTGGATGAACACACTCGTATTAAGTCAGAACCA CGCAACGAGAGCATGTTTACGGATGATAATCCCTTTCAAAGTGGAAGCCCTGAGGCCCCTAAAAGCGCAAGGATG AGTTATGATGGCAAGCGGAAGAGCGTTTCGCGCTTATCTACAGACAGTCCAGCTCGGGGTCGCGGACTCAGGTCG CGGAAATCAGCAACCCCGTCCAACGTTCAGCAAGACGATGGCTTCCAGCCACCGAAGCGGGATTCGTTTGATTTC GCCTCCCGGCTGATGCCTCCACAGGAGGAACCTGAGGAGGAATCGGATGAATCCGAGGATGATGAAGGGAGCGAA ATTGGCGCAGGTGAAGAATTCACACCTGAGGAACAGCTCGCTATGTCTATGGAGGATGACCAGTACTCGCCACAA ATTCAGGCTAGACGACGGCCCCAAAAGCAAAGCACTCTCAGCCGCTTGGCACCTTGGGTAGTCATCCTGTCACTG GTCGGTAGTTTTGGTACCTGGTGGCGCAAAGAAAAACTCGAGATTGGATATTGCGGCCTAGGAAAGCCCACCTGG TCTTTGGCAGACACTAAAGTTCCTGAATGGGCGAATGTGCTGGAGCCCCGGTGCGAGCCGTGCCCAAGCCACGCC TTCTGCTACCCAGACTTTGTAGTCCGCTGCGAAAATGATTTCCTGTTGAAGCCGCATCCTCTCGCCCTCGGAGGC CTAGTGCCGTTGCCGCCAACATGTGAACCTGATAGTGAAAAGGAACGCCGCGTGAAGGCCGTTGCTGATAAAGCT GTTGAGGAGCTTCGTGAGCGCCGGGCAAAGTGGGAATGCGGTCAGCTAAAGGAAGACGGGAAGGGCGCCAGATCT CCAGACATCAGCGAGCCAGAGTTGAGGGAAGAGGTGGCTAAGAAACGCCGCAAGGGCATGAGTGACACGGAATTT GATGAGCTGTGGAAGGGCGCCATTGGGGAGATCCTTGAAAAAGATGAAGTTATTAGCAAGACCAAGCAAAATTCC GCCATCCTCATCCTCTCCTCCACCTCCATTGCACGGCTCCCACTCGCATGCGCCGTCCGCCGCTACTTCCGACTC ACTCTCCTCGCGTATCGACTCCCTATTTCACTTTTAATCATGACCATCGGTCTTCTTGTGTACGCTCGTGCGCGT GTCCTCGCACGTCGGTCTGACATTGCTCGCGTGCCCGAATTGGTAGCTACAACCCTCGACCGACTATCCACGCAG GCTGCACTATACGCCCGCGGTGATGCCAAAGAACCTCATATTGCCATCGGGCAGCTCCGCGATGACGTTCTCCGC TTTGAACTCCAGGGCAAGCGTCGCGAGGAGCTCTGGCGACGGGTCCGCAGCTTTGTCGAAGGCAACGCCAACGTC CGCGCTTCTGTGCGTGAAGGACGTAGCGGTGATGTTTCTCGGGTCTGGGAGTGGATCGGTGGGATTAACGCTGTC GGCGAGCCGGAACATATTGGCCGCCGTGAGAGTGCACGATTCTCCGTCCCTTCTCCATCCGGTAATATTGTGACA AGCCCTCAGACGCCTGCGAGTGAAAGCCAGCCCGAGCCTATTTCTAGCCCAAGAGAGTCTCGCCGCTGGGACGAG AGCCGTCCGATCTATTGA
Transcript	>Pro_DTO377G3_2\|g5746.t1 ATGGCGGATGAACTGGAATATCTCCATCCAGATTTCGATCTGAACTCTCTCACCGTGCCTCGTCTCCGCTCGATC CTTGTCAACCACGATGTTCCCTACCCTGCCTCTGCAAAGAAGGCTCAACTGATCGGCATCCTCGAAGATGAAGTT CTTCCGCAAGCCAGAAAACTCTTGCGTGACCGCGACAGGGTTCGACGGACCAGTGCAGGTATTACAGATATGGGC AGTCGGTCTACATCGGTGGCAAGCGACGTGAACGACAGAGAGTCGATGCCTCCTCCACCCACACCCTCAACAGTC GGATCCACAAGCAGAAGCATGCGAGGCACATCGCGTCGCAGCACCCGTCACTCAACGGTAGATACAGATGATGGT CTGGAACCTGCCACACCTATAAGGAACACAAAACGCACGAGCGTCGCTCGCTCGGTGGGTAAACACGCTCGCACA TCTGACACGGAAACCGGCGACGACACACTCGCGACTCCAATCGCTGCTACCCGTCCTACGCCTCGCAAGTCTACA GCTAGAAAAATCGGACGGAGCGAGATCCTCCCTTCGACAGAACTGGATGAACACACTCGTATTAAGTCAGAACCA CGCAACGAGAGCATGTTTACGGATGATAATCCCTTTCAAAGTGGAAGCCCTGAGGCCCCTAAAAGCGCAAGGATG AGTTATGATGGCAAGCGGAAGAGCGTTTCGCGCTTATCTACAGACAGTCCAGCTCGGGGTCGCGGACTCAGGTCG CGGAAATCAGCAACCCCGTCCAACGTTCAGCAAGACGATGGCTTCCAGCCACCGAAGCGGGATTCGTTTGATTTC GCCTCCCGGCTGATGCCTCCACAGGAGGAACCTGAGGAGGAATCGGATGAATCCGAGGATGATGAAGGGAGCGAA ATTGGCGCAGGTGAAGAATTCACACCTGAGGAACAGCTCGCTATGTCTATGGAGGATGACCAGTACTCGCCACAA ATTCAGGCTAGACGACGGCCCCAAAAGCAAAGCACTCTCAGCCGCTTGGCACCTTGGGTAGTCATCCTGTCACTG GTCGGTAGTTTTGGTACCTGGTGGCGCAAAGAAAAACTCGAGATTGGATATTGCGGCCTAGGAAAGCCCACCTGG TCTTTGGCAGACACTAAAGTTCCTGAATGGGCGAATGTGCTGGAGCCCCGGTGCGAGCCGTGCCCAAGCCACGCC TTCTGCTACCCAGACTTTGTAGTCCGCTGCGAAAATGATTTCCTGTTGAAGCCGCATCCTCTCGCCCTCGGAGGC CTAGTGCCGTTGCCGCCAACATGTGAACCTGATAGTGAAAAGGAACGCCGCGTGAAGGCCGTTGCTGATAAAGCT GTTGAGGAGCTTCGTGAGCGCCGGGCAAAGTGGGAATGCGGTCAGCTAAAGGAAGACGGGAAGGGCGCCAGATCT CCAGACATCAGCGAGCCAGAGTTGAGGGAAGAGGTGGCTAAGAAACGCCGCAAGGGCATGAGTGACACGGAATTT GATGAGCTGTGGAAGGGCGCCATTGGGGAGATCCTTGAAAAAGATGAAGTTATTAGCAAGACCAAGCAAAATTCC GCCATCCTCATCCTCTCCTCCACCTCCATTGCACGGCTCCCACTCGCATGCGCCGTCCGCCGCTACTTCCGACTC ACTCTCCTCGCGTATCGACTCCCTATTTCACTTTTAATCATGACCATCGGTCTTCTTGTGTACGCTCGTGCGCGT GTCCTCGCACGTCGGTCTGACATTGCTCGCGTGCCCGAATTGGTAGCTACAACCCTCGACCGACTATCCACGCAG GCTGCACTATACGCCCGCGGTGATGCCAAAGAACCTCATATTGCCATCGGGCAGCTCCGCGATGACGTTCTCCGC TTTGAACTCCAGGGCAAGCGTCGCGAGGAGCTCTGGCGACGGGTCCGCAGCTTTGTCGAAGGCAACGCCAACGTC CGCGCTTCTGTGCGTGAAGGACGTAGCGGTGATGTTTCTCGGGTCTGGGAGTGGATCGGTGGGATTAACGCTGTC GGCGAGCCGGAACATATTGGCCGCCGTGAGAGTGCACGATTCTCCGTCCCTTCTCCATCCGGTAATATTGTGACA AGCCCTCAGACGCCTGCGAGTGAAAGCCAGCCCGAGCCTATTTCTAGCCCAAGAGAGTCTCGCCGCTGGGACGAG AGCCGTCCGATCTATTGA
Gene	>Pro_DTO377G3_2\|g5746.t1 ATGGCGGATGAACTGGAATATCTCCATCCAGATTTCGATCTGAACTCTCTCACCGTGCCTCGTCTCCGCTCGATC CTTGTCAACCACGATGTTCCCTACCCTGCCTCTGCAAAGAAGGCTCAACTGATCGGCATCCTCGAAGATGAAGTT CTTCCGCAAGCCAGAAAACTCTTGCGTGACCGCGACAGGGTTCGACGGACCAGTGCAGGTATTACAGATATGGGC AGTCGGTCTACATCGGTGGCAAGCGACGTGAACGACAGAGAGTCGATGCCTCCTCCACCCACACCCTCAACAGTC GGATCCACAAGCAGAAGCATGCGAGGCACATCGCGTCGCAGCACCCGTCACTCAACGGTAGATACAGATGATGGT CTGGAACCTGCCACACCTATAAGGAACACAAAACGCACGAGCGTCGCTCGCTCGGTGGGTAAACACGCTCGCACA TCTGACACGGAAACCGGCGACGACACACTCGCGACTCCAATCGCTGCTACCCGTCCTACGCCTCGCAAGTCTACA GCTAGAAAAATCGGACGGAGCGAGATCCTCCCTTCGACAGAACTGGATGAACACACTCGTATTAAGTCAGAACCA CGCAACGAGAGCATGTTTACGGATGATAATCCCTTTCAAAGTGGAAGCCCTGAGGCCCCTAAAAGCGCAAGGATG AGTTATGATGGCAAGCGGAAGAGCGTTTCGCGCTTATCTACAGACAGTCCAGCTCGGGGTCGCGGACTCAGGTCG CGGAAATCAGCAACCCCGTCCAACGTTCAGCAAGACGATGGCTTCCAGCCACCGAAGCGGGATTCGTTTGATTTC GCCTCCCGGCTGATGCCTCCACAGGAGGAACCTGAGGAGGAATCGGATGAATCCGAGGATGATGAAGGGAGCGAA ATTGGCGCAGGTGAAGAATTCACACCTGAGGAACAGCTCGCTATGTCTATGGAGGATGACCAGTACTCGCCACAA ATTCAGGCTAGACGACGGCCCCAAAAGCAAAGCACTCTCAGCCGCTTGGCACCTTGGGTAGTCATCCTGTCACTG GTCGGTAGTTTTGGTACCTGGTGGCGCAAAGAAAAACTCGAGATTGGATATTGCGGCCTAGGAAAGCCCACCTGG TCTTTGGCAGACACTAAAGTTCCTGAATGGGCGAATGTGCTGGAGCCCCGGTGCGAGCCGTGCCCAAGCCACGCC TTCTGCTACCCAGACTTTGTAGTCCGCTGCGAAAATGATTTCCTGTTGAAGCCGCATCCTCTCGCCCTCGGAGGC CTAGTGCCGTTGCCGCCAACATGTGAACCTGATAGTGAAAAGGAACGCCGCGTGAAGGCCGTTGCTGATAAAGCT GTTGAGGAGCTTCGTGAGCGCCGGGCAAAGTGGGAATGCGGTCAGCTAAAGGAAGACGGGAAGGGCGCCAGATCT CCAGACATCAGCGAGCCAGAGTTGAGGGAAGAGGTGGCTAAGAAACGCCGCAAGGGCATGAGTGACACGGAATTT GATGAGCTGTGGAAGGGCGCCATTGGGGAGATCCTTGAAAAAGATGAAGTTATTAGCAAGACCAAGCAGTAAGTT TCCTTTGCCCTAGGATGGATTCTCGTGTCTCCTTGGCTATGCTCGAGGCTCTGGATTTCGACATCCAGCCGCATT TCTTATAAAGATCTGGTCTGACCTTGTGTACCGGAACTGACAGAGGCGCGTTCGCAATCACAGAAATTCCGCCAT CCTCATCCTCTCCTCCACCTCCATTGCACGGCTCCCACTCGCATGCGCCGTCCGCCGCTACTTCCGACTCACTCT CCTCGCGTATCGACTCCCTATTTCACTTTTAATCATGACCATCGGTCTTCTTGTGTACGCTCGTGCGCGTGTCCT CGCACGTCGGTCTGACATTGCTCGCGTGCCCGAATTGGTAGCTACAACCCTCGACCGACTATCCACGCAGGCTGC ACTATACGCCCGCGGTGATGCCAAAGAACCTCATATTGCCATCGGGCAGCTCCGCGATGACGTTCTCCGCTTTGA ACTCCAGGGCAAGCGTCGCGAGGAGCTCTGGCGACGGGTCCGCAGCTTTGTCGAAGGCAACGCCAACGTCCGCGC TTCTGTGCGTGAAGGACGTAGCGGTGATGTTTCTCGGGTCTGGGAGTGGATCGGTGGGATTAACGCTGTCGGCGA GCCGGAACATATTGGCCGCCGTGAGAGTGCACGATTCTCCGTCCCTTCTCCATCCGGTAATATTGTGACAAGCCC TCAGACGCCTGCGAGTGAAAGCCAGCCCGAGCCTATTTCTAGCCCAAGAGAGTCTCGCCGCTGGGACGAGAGCCG TCCGATCTATTGA

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