Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5744.t1
Gene name
Locationscaffold_14:303702..305934
Strand-
Gene length (bp)2232
Transcript length (bp)2052
Coding sequence length (bp)2052
Protein length (aa) 684

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 7.6E-36 157 415

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0006725 cellular aromatic compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0005488 binding No
GO:0008152 metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043167 ion binding No
GO:0032774 RNA biosynthetic process No
GO:0046872 metal ion binding No
GO:0016070 RNA metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0097659 nucleic acid-templated transcription No
GO:0043169 cation binding No
GO:0044238 primary metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0003674 molecular_function No
GO:0046483 heterocycle metabolic process No
GO:0009058 biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 500 522 22

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5744.t1
MECKYNAAYSRGLPPDPLPVSPGPISTPTRNPAFEAVDGRISSFNLQGTGRDPALTNNLLSNQSQSQRQHVISPR
HSPEPGSTDFEGNYLGPSSGVSFLNRVWSRLHQDETANFPDKLQIESSRNTAVFMFGDKPYSNPQDAEFTLPTLE
KALELVGIYFDYSMVTYRFVHRGNVEEWTRQVYQNNIGLSNLPVGNMVARTAIVLMIIAVSTLYMEMRPGEMPGG
PGERLESERWYAASKYMSSLESGPPRLETIQARLGQCLYLLSSSRANECWYSFGTTMQIVTALGLHRRGPAKVSN
NGCSYLELELRKRIFWSVYTLDKYLSIMFGRPRLLHDEDIDQELPNETNDIDLLEEDPTRRTGSTDSMMIASVLH
YRLGRILGDISRQLYSINTLSRDSPLETAIRLTSELEKWKETVPPLFNSVHPTSLIPPLCRQSQVLQLAYSHAMI
HVTRSFLLNDFTDLSRRPKVPHPMVSSHVHKCIQAAEDIMTIVDGLAHQGVLIQSFWFTHYVCFCAVLVIYIHTI
QQHRKSMGGSSSASVSSVGSPRDPDKLRQLFSLAESCQQHLAEATRKNCPSRRYGIILEELRQEVHRQISNGLSV
ETQAHSGANVTLYVSGEGSQTTDVKSVLFDTQGVDFMMQPPDLGTNPGDDAGFLESLEGSIWWAQLDSWALSNLP
NDPSTFSF*
Coding >Pro_DTO377G3_2|g5744.t1
ATGGAATGCAAATACAACGCCGCATATTCTCGGGGACTACCACCAGACCCTCTTCCTGTGTCACCGGGTCCAATT
TCGACTCCCACTAGAAATCCGGCATTTGAAGCTGTGGATGGGCGCATATCCAGCTTCAATTTACAGGGCACTGGC
CGGGACCCGGCTTTGACCAACAATCTACTTTCAAACCAAAGCCAAAGCCAGCGCCAGCATGTGATCTCACCGCGG
CATTCACCAGAACCAGGTTCAACGGATTTTGAGGGTAATTACCTCGGTCCTTCATCCGGTGTGTCGTTCTTAAAT
CGCGTATGGAGCCGTCTGCATCAAGATGAAACCGCGAACTTCCCAGATAAACTCCAAATTGAGTCCTCGCGGAAT
ACAGCCGTCTTTATGTTTGGTGATAAGCCTTACTCCAACCCTCAAGACGCGGAATTTACCCTCCCGACTCTGGAA
AAGGCCCTGGAGTTGGTGGGAATATACTTCGATTACTCTATGGTGACTTATCGATTCGTGCATAGAGGTAATGTA
GAAGAATGGACTAGACAGGTTTATCAAAATAACATCGGCCTCTCGAATCTGCCGGTGGGAAATATGGTTGCTCGG
ACTGCTATCGTTCTGATGATCATTGCTGTGAGTACTTTGTACATGGAAATGAGGCCCGGGGAAATGCCTGGGGGG
CCAGGTGAAAGATTAGAAAGTGAGCGCTGGTACGCAGCATCGAAATATATGTCTTCTCTCGAGTCAGGGCCGCCG
CGACTGGAAACCATCCAGGCCCGGCTAGGCCAATGCCTATACCTGCTGTCATCGTCACGGGCTAACGAATGCTGG
TACTCATTCGGAACGACAATGCAGATTGTGACTGCACTCGGATTACACAGGAGGGGGCCAGCCAAAGTCTCGAAT
AACGGGTGCTCGTATCTAGAATTGGAGCTTCGCAAGCGCATCTTCTGGAGTGTATACACTCTAGATAAATATCTA
AGCATTATGTTCGGAAGGCCTCGACTGCTCCACGATGAGGACATCGACCAAGAACTACCGAACGAGACGAACGAC
ATAGACTTACTGGAAGAAGACCCAACGCGAAGAACAGGATCTACGGACAGCATGATGATTGCCTCTGTTCTTCAT
TACCGACTTGGTCGTATCCTGGGCGACATATCTCGCCAACTATACAGCATAAACACCCTCTCTCGCGACTCCCCA
CTCGAGACAGCAATCCGCCTAACCTCAGAACTCGAAAAATGGAAAGAAACAGTCCCACCATTGTTCAACAGCGTC
CACCCGACCAGTTTAATTCCACCCCTCTGCCGCCAAAGCCAAGTCCTCCAACTCGCCTACTCGCACGCCATGATC
CACGTCACCCGCTCATTTCTCTTAAACGATTTCACAGACCTCAGCCGCAGACCGAAAGTCCCGCACCCGATGGTC
AGCTCGCACGTCCATAAATGCATCCAGGCTGCCGAGGACATCATGACAATAGTCGATGGTCTTGCGCACCAGGGT
GTACTGATCCAGTCCTTCTGGTTCACACACTACGTGTGTTTCTGTGCTGTTCTGGTCATTTACATCCATACCATC
CAACAGCACCGTAAGTCAATGGGCGGATCTAGCTCAGCCTCTGTCTCTTCGGTCGGAAGTCCCCGTGACCCAGAT
AAATTACGCCAGCTCTTTTCTCTCGCTGAATCTTGTCAGCAACATCTTGCCGAGGCCACGCGCAAGAACTGTCCG
AGCCGTCGCTACGGGATTATCCTGGAGGAGTTGAGACAGGAGGTTCATCGGCAGATATCTAATGGGCTCTCGGTT
GAAACTCAGGCTCATTCTGGTGCAAATGTTACTCTCTATGTTTCGGGAGAGGGTTCACAAACTACGGATGTAAAA
TCGGTACTCTTTGATACTCAGGGGGTTGATTTCATGATGCAACCACCCGATTTGGGAACGAATCCGGGTGATGAT
GCAGGCTTCCTTGAGAGCCTTGAGGGATCAATCTGGTGGGCTCAACTTGACTCATGGGCCTTGTCCAATCTCCCT
AATGATCCCTCGACATTTAGCTTTTAA
Transcript >Pro_DTO377G3_2|g5744.t1
ATGGAATGCAAATACAACGCCGCATATTCTCGGGGACTACCACCAGACCCTCTTCCTGTGTCACCGGGTCCAATT
TCGACTCCCACTAGAAATCCGGCATTTGAAGCTGTGGATGGGCGCATATCCAGCTTCAATTTACAGGGCACTGGC
CGGGACCCGGCTTTGACCAACAATCTACTTTCAAACCAAAGCCAAAGCCAGCGCCAGCATGTGATCTCACCGCGG
CATTCACCAGAACCAGGTTCAACGGATTTTGAGGGTAATTACCTCGGTCCTTCATCCGGTGTGTCGTTCTTAAAT
CGCGTATGGAGCCGTCTGCATCAAGATGAAACCGCGAACTTCCCAGATAAACTCCAAATTGAGTCCTCGCGGAAT
ACAGCCGTCTTTATGTTTGGTGATAAGCCTTACTCCAACCCTCAAGACGCGGAATTTACCCTCCCGACTCTGGAA
AAGGCCCTGGAGTTGGTGGGAATATACTTCGATTACTCTATGGTGACTTATCGATTCGTGCATAGAGGTAATGTA
GAAGAATGGACTAGACAGGTTTATCAAAATAACATCGGCCTCTCGAATCTGCCGGTGGGAAATATGGTTGCTCGG
ACTGCTATCGTTCTGATGATCATTGCTGTGAGTACTTTGTACATGGAAATGAGGCCCGGGGAAATGCCTGGGGGG
CCAGGTGAAAGATTAGAAAGTGAGCGCTGGTACGCAGCATCGAAATATATGTCTTCTCTCGAGTCAGGGCCGCCG
CGACTGGAAACCATCCAGGCCCGGCTAGGCCAATGCCTATACCTGCTGTCATCGTCACGGGCTAACGAATGCTGG
TACTCATTCGGAACGACAATGCAGATTGTGACTGCACTCGGATTACACAGGAGGGGGCCAGCCAAAGTCTCGAAT
AACGGGTGCTCGTATCTAGAATTGGAGCTTCGCAAGCGCATCTTCTGGAGTGTATACACTCTAGATAAATATCTA
AGCATTATGTTCGGAAGGCCTCGACTGCTCCACGATGAGGACATCGACCAAGAACTACCGAACGAGACGAACGAC
ATAGACTTACTGGAAGAAGACCCAACGCGAAGAACAGGATCTACGGACAGCATGATGATTGCCTCTGTTCTTCAT
TACCGACTTGGTCGTATCCTGGGCGACATATCTCGCCAACTATACAGCATAAACACCCTCTCTCGCGACTCCCCA
CTCGAGACAGCAATCCGCCTAACCTCAGAACTCGAAAAATGGAAAGAAACAGTCCCACCATTGTTCAACAGCGTC
CACCCGACCAGTTTAATTCCACCCCTCTGCCGCCAAAGCCAAGTCCTCCAACTCGCCTACTCGCACGCCATGATC
CACGTCACCCGCTCATTTCTCTTAAACGATTTCACAGACCTCAGCCGCAGACCGAAAGTCCCGCACCCGATGGTC
AGCTCGCACGTCCATAAATGCATCCAGGCTGCCGAGGACATCATGACAATAGTCGATGGTCTTGCGCACCAGGGT
GTACTGATCCAGTCCTTCTGGTTCACACACTACGTGTGTTTCTGTGCTGTTCTGGTCATTTACATCCATACCATC
CAACAGCACCGTAAGTCAATGGGCGGATCTAGCTCAGCCTCTGTCTCTTCGGTCGGAAGTCCCCGTGACCCAGAT
AAATTACGCCAGCTCTTTTCTCTCGCTGAATCTTGTCAGCAACATCTTGCCGAGGCCACGCGCAAGAACTGTCCG
AGCCGTCGCTACGGGATTATCCTGGAGGAGTTGAGACAGGAGGTTCATCGGCAGATATCTAATGGGCTCTCGGTT
GAAACTCAGGCTCATTCTGGTGCAAATGTTACTCTCTATGTTTCGGGAGAGGGTTCACAAACTACGGATGTAAAA
TCGGTACTCTTTGATACTCAGGGGGTTGATTTCATGATGCAACCACCCGATTTGGGAACGAATCCGGGTGATGAT
GCAGGCTTCCTTGAGAGCCTTGAGGGATCAATCTGGTGGGCTCAACTTGACTCATGGGCCTTGTCCAATCTCCCT
AATGATCCCTCGACATTTAGCTTTTAA
Gene >Pro_DTO377G3_2|g5744.t1
ATGGAATGCAAATACAACGCCGCATATTCTCGGGGACTACCACCAGACCCTCTTCCTGTGTCACCGGGTCCAATT
TCGACTCCCACTAGAAATCCGGCATTTGAAGCTGTGGATGGGCGCATATCCAGCTTCAATTTACAGGGCACTGGC
CGGGACCCGGCTTTGACCAACAATCTACTTTCAAACCAAAGCCAAAGCCAGCGCCAGCATGTGATCTCACCGCGG
CATTCACCAGAACCAGGTTCAACGGATTTTGAGGGTAATTACCTCGGTCCTTCATCCGGTGTGTCGTTCTTAAAT
CGCGTATGGAGCCGTCTGCATCAAGATGAAACCGCGAACTTCCCAGATAAACTCCAAATTGAGTCCTCGCGGAAT
ACAGCCGTCTTTATGTTTGGTGATAAGCCTTACTCCAACCCTCAAGACGCGGAATTTACCCTCCCGACTCTGGAA
AAGGCCCTGGAGTTGGTGGGAATATACTTCGATTACTCTATGGTGACTTATCGATTCGTGCATAGAGGTAATGTA
GAAGAATGGACTAGACAGGTTTATCAAAATAACATCGGCCTCTCGAATCTGCCGGTGGGAAATATGGTTGCTCGG
ACTGCTATCGTTCTGATGATCATTGCTGTGAGTACTTTGTACATGGAAATGAGGCCCGGGGAAATGCCTGGGGGG
CCAGGTGAAAGATTAGAAAGGTCAGTAATCTCTTGATATCAGAAAAGGAGCCCAGCTGAGAAATTGCAGTGAGCG
CTGGTACGCAGCATCGAAATATATGTCTTCTCTCGAGTCAGGGCCGCCGCGACTGGAAACCATCCAGGCCCGGCT
AGGCCAATGCCTATACCTGCTGTCATCGTCACGGGCTAACGAATGCTGGTACTCATTCGGAACGACAATGCAGAT
TGTGACTGCACTCGGATTACACAGGAGGGGGCCAGCCAAAGTCTCGAATAACGGGTGCTCGTATCTAGAATTGGA
GCTTCGCAAGCGCATCTTCTGGAGTGTATACACTCTAGATAAATATCTAAGCATTATGTTCGGAAGGCCTCGACT
GCTCCACGATGAGGACATCGACCAAGAACTACCGAACGAGACGAACGACATAGACTTACTGGAAGAAGACCCAAC
GCGAAGAACAGGATCTACGGACAGCATGATGATTGCCTCTGTTCTTCATTACCGGTGAGTCCCTCACCTAGCCTG
TACGTATACCTGAGCACTAACATCGAACACAGACTTGGTCGTATCCTGGGCGACATATCTCGCCAACTATACAGC
ATAAACACCCTCTCTCGCGACTCCCCACTCGAGACAGCAATCCGCCTAACCTCAGAACTCGAAAAATGGAAAGAA
ACAGTCCCACCATTGTTCAACAGCGTCCACCCGACCAGTTTAATTCCACCCCTCTGCCGCCAAAGCCAAGTCCTC
CAACTCGCCTACTCGCACGCCATGATCCACGTCACCCGCTCATTTCTCTTAAACGATTTCACAGACCTCAGCCGC
AGACCGAAAGTCCCGCACCCGATGGTCAGCTCGCACGTCCATAAATGCATCCAGGCTGCCGAGGACATCATGACA
ATAGTCGATGGTCTTGCGCACCAGGGTGTACTGATCCAGTCCTTCTGGTTCACACACTACGTGTGTTTCTGTGCT
GTTCTGGTCATTTACATCCATACCATCCAACAGCACCGTAAGTCAATGGGCGGATCTAGCTCAGCCTCTGTCTCT
TCGGTCGGAAGTCCCCGTGACCCAGATAAATTACGCCAGCTCTTTTCTCTCGCTGAATCTTGTCAGCAACATCTT
GCCGAGGCCACGCGCAAGAACTGTCCGAGCCGTCGCTACGGGATTATCCTGGAGGAGTTGAGACAGGAGGTTCAT
CGGCAGATATCTAATGGGCTCTCGGTTGAAACTCAGGCTCATTCTGGTGCAAATGTTACTCTCTATGTTTCGGGA
GAGGGTTCACAAACTACGGATGTAAAATCGGTACTCTTTGATACTCAGGGGGTTGATTTCATGATGCAACCACCC
GATTTGGGAACGAATCCGGGTGATGATGCAGGCTTCCTTGAGAGCCTTGAGGGATCAATCTGGTGGGCTCAACTT
GACTCATGGGTATGTATTATGCTTTTCTTGACGATACGAGTACGGAATATCACTCGCCTATACACATCTTGTTTA
ACTTTGTTCTAGGCCTTGTCCAATCTCCCTAATGATCCCTCGACATTTAGCTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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