Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g5740.t1
Gene name
Location	scaffold_14:292097..292955
Strand	+
Gene length (bp)	858
Transcript length (bp)	711
Coding sequence length (bp)	711
Protein length (aa)	237

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09445	Methyltransf_15	RNA cap guanine-N2 methyltransferase	3.5E-51	74	231
PF02475	Met_10	Met-10+ like-protein	8.7E-10	74	194
PF03602	Cons_hypoth95	Conserved hypothetical protein 95	4.0E-07	70	155
PF01170	UPF0020	Putative RNA methylase family UPF0020	1.3E-05	96	178

GO

GO Term	Description	Terminal node
GO:0008168	methyltransferase activity	Yes
GO:0009452	7-methylguanosine RNA capping	Yes
GO:0001510	RNA methylation	Yes
GO:0009987	cellular process	No
GO:0036260	RNA capping	No
GO:0046483	heterocycle metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0009451	RNA modification	No
GO:0016740	transferase activity	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0003824	catalytic activity	No
GO:0006396	RNA processing	No
GO:0044238	primary metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0043414	macromolecule methylation	No
GO:0043170	macromolecule metabolic process	No
GO:0016741	transferase activity, transferring one-carbon groups	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0032259	methylation	No
GO:0008152	metabolic process	No
GO:0008150	biological_process	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0043412	macromolecule modification	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0044237	cellular metabolic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5740.t1 MADEDAPPEVHHYSSLHEVPWDIQNYWAQRYRIFSKYDDGVWLTDDAWFGVTPEPVANTIASQIAESAPAGRSIL VDAFAGAGGNTIAFALTGKWKRIYAIEKNPAVLKCAKHNAKIYGVEDKITWFEGDCFEILKNQLKELAPYSLVFA SPPWGGPGYRSDQVFNLKTMEPYSLQRLYDEYSAFSKHMVLYIPRTSDLAQIAKLVPDGNKATVMHYCMEGASKA LCIFYGDFNVT*
Coding	>Pro_DTO377G3_2\|g5740.t1 ATGGCAGATGAAGACGCGCCTCCAGAGGTGCATCACTACAGCAGCTTGCATGAAGTGCCCTGGGACATCCAGAAC TACTGGGCGCAACGCTATCGGATCTTTTCCAAGTACGATGATGGCGTATGGTTGACCGATGATGCTTGGTTTGGT GTCACACCAGAACCAGTCGCAAACACTATAGCTTCGCAGATTGCCGAATCAGCGCCTGCTGGGCGCAGTATTCTC GTGGACGCCTTCGCTGGCGCAGGAGGTAACACCATTGCATTTGCTTTGACCGGAAAATGGAAACGAATCTACGCG ATCGAAAAAAACCCCGCTGTGCTGAAGTGCGCAAAGCATAATGCGAAAATCTATGGGGTGGAGGACAAGATCACT TGGTTCGAAGGCGATTGTTTCGAGATTCTCAAGAATCAACTCAAAGAACTGGCGCCGTACAGTCTCGTCTTCGCC AGCCCTCCCTGGGGAGGCCCGGGATATCGTTCAGATCAGGTATTCAACCTGAAAACCATGGAGCCATATTCCCTC CAACGATTGTATGATGAATACTCAGCATTCAGCAAGCACATGGTCCTTTACATTCCAAGGACCTCTGATTTGGCA CAAATTGCAAAACTGGTTCCTGACGGTAACAAGGCTACAGTAATGCACTATTGCATGGAGGGTGCAAGCAAGGCG TTGTGTATTTTCTATGGGGATTTCAATGTGACATGA
Transcript	>Pro_DTO377G3_2\|g5740.t1 ATGGCAGATGAAGACGCGCCTCCAGAGGTGCATCACTACAGCAGCTTGCATGAAGTGCCCTGGGACATCCAGAAC TACTGGGCGCAACGCTATCGGATCTTTTCCAAGTACGATGATGGCGTATGGTTGACCGATGATGCTTGGTTTGGT GTCACACCAGAACCAGTCGCAAACACTATAGCTTCGCAGATTGCCGAATCAGCGCCTGCTGGGCGCAGTATTCTC GTGGACGCCTTCGCTGGCGCAGGAGGTAACACCATTGCATTTGCTTTGACCGGAAAATGGAAACGAATCTACGCG ATCGAAAAAAACCCCGCTGTGCTGAAGTGCGCAAAGCATAATGCGAAAATCTATGGGGTGGAGGACAAGATCACT TGGTTCGAAGGCGATTGTTTCGAGATTCTCAAGAATCAACTCAAAGAACTGGCGCCGTACAGTCTCGTCTTCGCC AGCCCTCCCTGGGGAGGCCCGGGATATCGTTCAGATCAGGTATTCAACCTGAAAACCATGGAGCCATATTCCCTC CAACGATTGTATGATGAATACTCAGCATTCAGCAAGCACATGGTCCTTTACATTCCAAGGACCTCTGATTTGGCA CAAATTGCAAAACTGGTTCCTGACGGTAACAAGGCTACAGTAATGCACTATTGCATGGAGGGTGCAAGCAAGGCG TTGTGTATTTTCTATGGGGATTTCAATGTGACATGA
Gene	>Pro_DTO377G3_2\|g5740.t1 ATGGCAGATGAAGACGCGCCTCCAGAGGTGCATCACTACAGCAGCTTGCATGAAGTGCCCTGGGACATCCAGAAG TAAGTGTCATCATCATTAAAAAACACCAATGCTAACCTAATTATCAGCTACTGGGCGCAACGCTATCGGATCTTT TCCAAGTACGATGATGGCGTATGGTTGACCGATGATGCTTGGTTTGGTGTCACACCAGAACCAGTCGCAAAGTTT GTGACTCTTTTCGATTATGCCAGAATTTCTGCTAATATTTGTTTAGCACTATAGCTTCGCAGATTGCCGAATCAG CGCCTGCTGGGCGCAGTATTCTCGTGGACGCCTTCGCTGGCGCAGGAGGTAACACCATTGCATTTGCTTTGACCG GAAAATGGAAACGAATCTACGCGATCGAAAAAAACCCCGCTGTGCTGAAGTGCGCAAAGCATAATGCGAAAATCT ATGGGGTGGAGGACAAGATCACTTGGTTCGAAGGCGATTGTTTCGAGATTCTCAAGAATCAACTCAAAGAACTGG CGCCGTACAGTCTCGTCTTCGCCAGCCCTCCCTGGGGAGGTAAGTGTCACCGAATCGTTACTTCTGCGACATGAA CTGATTGTAGCAGGCCCGGGATATCGTTCAGATCAGGTATTCAACCTGAAAACCATGGAGCCATATTCCCTCCAA CGATTGTATGATGAATACTCAGCATTCAGCAAGCACATGGTCCTTTACATTCCAAGGACCTCTGATTTGGCACAA ATTGCAAAACTGGTTCCTGACGGTAACAAGGCTACAGTAATGCACTATTGCATGGAGGGTGCAAGCAAGGCGTTG TGTATTTTCTATGGGGATTTCAATGTGACATGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences