Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5732.t1
Gene name
Locationscaffold_14:275014..276488
Strand+
Gene length (bp)1474
Transcript length (bp)1308
Coding sequence length (bp)1308
Protein length (aa) 436

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 9.0E-12 297 338
PF17123 zf-RING_11 RING-like zinc finger 1.4E-10 297 324
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.1E-07 296 343
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 3.1E-09 297 337
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.2E-05 297 337

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5732.t1
MDTGDRMLCHACGGVWTKDGDFLTCPHCQSEFTEIIEIPPEISPEGSPSRRADSVSPSRVSPWLDHNPWEQDTQE
QQGPGFFGRATPPFSSLRTYRSPDGRFSFSSATLETGRPSGQRNNGPNPVVPMMMHGFDTIFQNLMEPNARGYRG
FGEDPFHPQSSTAPDWLEDDHLTGHHPGLSPRNADAPQPVNRNPTDINEIMDAIRADIGVQTTRRSRGGRNPASP
HALSILSALLNMSRSGDAVYSQEELDRVITQLVDNPGGTSTAAPPASDAAVQALPKQKITEEMMGSEGKAVCSIC
MDNVELGLEVTVLPCAHWFHYNCIHAWLTQHDTCPHCRRSINSNTTGGEGTPENPVVIRDSPEQPRSQPRRSSAR
TVRSGRSSLSSSLQSRLSTRMSPPGSPTPEGGESRNRRSSRGEGVGGLAGWLTNRFGSSA*
Coding >Pro_DTO377G3_2|g5732.t1
ATGGACACTGGCGACCGCATGTTATGCCATGCCTGTGGCGGGGTTTGGACTAAGGATGGTGATTTTTTGACGTGC
CCACATTGTCAATCGGAGTTCACAGAAATAATTGAAATCCCCCCAGAAATATCTCCCGAAGGCTCCCCCTCACGC
CGTGCGGACTCCGTATCGCCTTCGCGCGTTAGCCCATGGTTAGACCACAATCCGTGGGAACAAGACACGCAAGAA
CAGCAAGGCCCCGGGTTTTTCGGAAGGGCTACTCCTCCATTTTCCTCCTTGCGCACATACAGATCGCCGGACGGT
CGCTTCTCATTCAGCAGCGCGACACTTGAGACCGGAAGGCCTTCTGGTCAGCGCAACAATGGCCCGAACCCTGTG
GTTCCGATGATGATGCACGGCTTTGACACAATTTTTCAAAATTTAATGGAGCCAAATGCCCGTGGTTACAGAGGC
TTTGGAGAGGACCCCTTCCATCCTCAATCCTCTACCGCTCCCGACTGGCTCGAGGACGACCACCTTACTGGCCAT
CACCCAGGCCTCTCTCCCCGCAATGCAGATGCGCCTCAACCTGTCAACCGCAACCCGACAGACATAAATGAAATC
ATGGACGCCATTCGTGCTGACATTGGAGTACAAACTACACGACGCTCACGTGGAGGTCGTAACCCGGCAAGCCCA
CATGCTCTTTCGATATTGTCTGCCCTTCTCAACATGAGTCGAAGCGGGGATGCAGTCTATTCGCAGGAGGAGCTC
GACCGAGTCATCACACAACTGGTTGATAATCCTGGAGGGACTAGCACTGCGGCACCGCCAGCATCTGATGCTGCC
GTCCAAGCTTTGCCGAAGCAGAAGATCACTGAAGAGATGATGGGATCTGAAGGAAAAGCAGTGTGTTCGATTTGC
ATGGATAACGTTGAACTCGGCTTGGAAGTCACTGTGTTACCATGCGCTCACTGGTTTCATTACAACTGCATCCAT
GCATGGCTGACCCAGCATGACACTTGTCCGCATTGCCGGCGCAGCATCAATTCAAATACAACAGGCGGAGAAGGC
ACCCCTGAGAATCCGGTAGTGATCCGGGATAGTCCTGAGCAGCCGAGATCCCAACCGCGTCGCAGTTCTGCTCGC
ACTGTGCGCAGCGGTCGATCCTCATTATCTTCTTCATTGCAGAGTCGGCTTTCCACTCGAATGTCACCACCCGGG
TCCCCTACACCAGAGGGAGGGGAATCCAGGAACCGTCGGTCTAGCCGGGGTGAGGGTGTTGGGGGACTCGCCGGT
TGGCTTACGAACCGATTTGGAAGCAGCGCATGA
Transcript >Pro_DTO377G3_2|g5732.t1
ATGGACACTGGCGACCGCATGTTATGCCATGCCTGTGGCGGGGTTTGGACTAAGGATGGTGATTTTTTGACGTGC
CCACATTGTCAATCGGAGTTCACAGAAATAATTGAAATCCCCCCAGAAATATCTCCCGAAGGCTCCCCCTCACGC
CGTGCGGACTCCGTATCGCCTTCGCGCGTTAGCCCATGGTTAGACCACAATCCGTGGGAACAAGACACGCAAGAA
CAGCAAGGCCCCGGGTTTTTCGGAAGGGCTACTCCTCCATTTTCCTCCTTGCGCACATACAGATCGCCGGACGGT
CGCTTCTCATTCAGCAGCGCGACACTTGAGACCGGAAGGCCTTCTGGTCAGCGCAACAATGGCCCGAACCCTGTG
GTTCCGATGATGATGCACGGCTTTGACACAATTTTTCAAAATTTAATGGAGCCAAATGCCCGTGGTTACAGAGGC
TTTGGAGAGGACCCCTTCCATCCTCAATCCTCTACCGCTCCCGACTGGCTCGAGGACGACCACCTTACTGGCCAT
CACCCAGGCCTCTCTCCCCGCAATGCAGATGCGCCTCAACCTGTCAACCGCAACCCGACAGACATAAATGAAATC
ATGGACGCCATTCGTGCTGACATTGGAGTACAAACTACACGACGCTCACGTGGAGGTCGTAACCCGGCAAGCCCA
CATGCTCTTTCGATATTGTCTGCCCTTCTCAACATGAGTCGAAGCGGGGATGCAGTCTATTCGCAGGAGGAGCTC
GACCGAGTCATCACACAACTGGTTGATAATCCTGGAGGGACTAGCACTGCGGCACCGCCAGCATCTGATGCTGCC
GTCCAAGCTTTGCCGAAGCAGAAGATCACTGAAGAGATGATGGGATCTGAAGGAAAAGCAGTGTGTTCGATTTGC
ATGGATAACGTTGAACTCGGCTTGGAAGTCACTGTGTTACCATGCGCTCACTGGTTTCATTACAACTGCATCCAT
GCATGGCTGACCCAGCATGACACTTGTCCGCATTGCCGGCGCAGCATCAATTCAAATACAACAGGCGGAGAAGGC
ACCCCTGAGAATCCGGTAGTGATCCGGGATAGTCCTGAGCAGCCGAGATCCCAACCGCGTCGCAGTTCTGCTCGC
ACTGTGCGCAGCGGTCGATCCTCATTATCTTCTTCATTGCAGAGTCGGCTTTCCACTCGAATGTCACCACCCGGG
TCCCCTACACCAGAGGGAGGGGAATCCAGGAACCGTCGGTCTAGCCGGGGTGAGGGTGTTGGGGGACTCGCCGGT
TGGCTTACGAACCGATTTGGAAGCAGCGCATGA
Gene >Pro_DTO377G3_2|g5732.t1
ATGGACACTGGCGACCGCATGTTATGCCATGCCTGTGGCGGGGTTTGGACTAAGGATGGTGATTTTTTGACGTGC
CCACATTGTCAATCGGAGTTCACAGAAATAGTACAGCGAATACTTTCTCTCTTGGTTTATTTAATTCTGACACTG
TCGCTTCCTCTAGATTGAAATCCCCCCAGAAATATCTCCCGAAGGCTCCCCCTCACGCCGTGCGGACTCCGTATC
GCCTTCGCGCGTTAGCCCATGGTTAGACCACAATCCGTGGGAACAAGACACGCAAGAACAGCAAGGCCCCGGGTT
TTTCGGAAGGGCTACTCCTCCATTTTCCTCCTTGCGCACATACAGATCGCCGGACGGTCGCTTCTCATTCAGCAG
CGCGACACTTGAGACCGGAAGGCCTTCTGGTCAGCGCAACAATGGCCCGAACCCTGTGGTTCCGATGATGATGCA
CGGCTTTGACACAATTTTTCAAAATTTAATGGAGCCAAATGCCCGTGGTTACAGAGGCTTTGGAGAGGACCCCTT
CCATCCTCAATCCTCTACCGCTCCCGACTGGCTCGAGGACGACCACCTTACTGGCCATCACCCAGGCCTCTCTCC
CCGCAATGCAGATGCGCCTCAACCTGTCAACCGCAACCCGACAGACATAAATGAGTATGTACTTGGCTACTATGT
TGCATTATCACCAGACTAATCAAATCTAGAATCATGGACGCCATTCGTGCTGACATTGGAGTACAAACTACACGA
CGCTCACGTGGAGGTCGTAACCCGGCAAGCCCACATGCTCTTTCGATATTGTCTGCCCTTCTCAACATGAGTCGA
AGCGGGGATGCAGTCTATTCGCAGGAGGAGCTCGACCGAGTCATCACACAACTGGTTGATAATCCTGGAGGGACT
AGCACTGCGGCACCGCCAGCATCTGATGCTGCCGTCCAAGCTTTGCCGAAGCAGAAGATCACTGAAGAGATGATG
GGATCTGAAGGAAAAGCAGTGTGTTCGATTTGCATGGATAACGTTGAACTCGGCTTGGAAGTCACTGTGTTACCA
TGCGCTCACTGGTTTCATTACAACTGCATCCATGCATGGCTGACCCAGCATGACACTTGTCCGCATTGCCGGCGC
AGCATCAATTCAAATACAACGTAAGTATGTGAGTCGTATCCATGAACGACGACTCTCAGTTGACGGTATATCTCA
CAGAGGCGGAGAAGGCACCCCTGAGAATCCGGTAGTGATCCGGGATAGTCCTGAGCAGCCGAGATCCCAACCGCG
TCGCAGTTCTGCTCGCACTGTGCGCAGCGGTCGATCCTCATTATCTTCTTCATTGCAGAGTCGGCTTTCCACTCG
AATGTCACCACCCGGGTCCCCTACACCAGAGGGAGGGGAATCCAGGAACCGTCGGTCTAGCCGGGGTGAGGGTGT
TGGGGGACTCGCCGGTTGGCTTACGAACCGATTTGGAAGCAGCGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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