Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5715.t1
Gene name
Locationscaffold_14:225638..227326
Strand-
Gene length (bp)1688
Transcript length (bp)1305
Coding sequence length (bp)1305
Protein length (aa) 435

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02779 Transket_pyr Transketolase, pyrimidine binding domain 6.5E-42 111 286
PF02780 Transketolase_C Transketolase, C-terminal domain 4.6E-31 303 423

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5715.t1
MNSQFQDSFCFQWKRRAKISVILYSMFYIRYSYLHDTVLYQGYYAPKMASLRTPLRSFAQAPRRFYSGAPTPAAK
LNLPIDYKTTPILHHTSASLSNTSEYPAAATSKRLNLYQAINSALRTALSKSDRTIVFGEDVGFGGVFRCSMDLQ
TEFGSDRVFNTPLTEQGIAGFAIGAAAEGMKPIAEIQFADYVFPAFDQIVNEAAKFRYREGGTGINVGGLVIRMP
CGAVGHGALYHTQSPESLFAHIPGLRVVMPRSPAQAKGLLLSSIFEHNDPVIFLEPKILYRAAVEYVPNEYYTIP
LSKAEVIKPGKDLTVISYGQPLYLCSSAISAIEKAMPGVNVELIDLRTIYPWDRQTVIESVKKTGRAIVVHESMI
NYGVGAEVASTIQESAFLRLEAPVKRVAGWSTHTGLSYEQFILPDVTRIYDAIKQILEY*
Coding >Pro_DTO377G3_2|g5715.t1
ATGAATAGTCAATTCCAGGATTCATTCTGTTTCCAATGGAAAAGACGAGCAAAGATCTCCGTCATTCTATATTCT
ATGTTTTACATTCGATATTCATATTTGCATGATACTGTCCTTTATCAGGGATACTATGCTCCAAAGATGGCTTCT
TTACGAACTCCTTTGCGGTCTTTCGCTCAAGCTCCTCGCCGGTTCTACTCTGGAGCTCCTACTCCGGCAGCGAAG
CTAAACCTACCTATTGACTACAAAACCACTCCGATTTTACACCACACCTCAGCCTCCTTGTCAAATACATCAGAG
TACCCGGCAGCTGCCACGAGTAAACGACTCAATCTCTACCAAGCAATCAACTCAGCATTGCGGACCGCATTGTCC
AAATCCGATCGAACTATTGTGTTTGGCGAGGATGTTGGGTTTGGAGGCGTTTTCCGATGCTCGATGGATCTTCAA
ACAGAATTTGGATCGGATCGGGTCTTCAACACCCCCTTGACCGAACAAGGCATTGCGGGTTTTGCAATTGGGGCA
GCAGCGGAAGGGATGAAGCCTATAGCTGAGATCCAATTCGCCGACTACGTGTTTCCAGCGTTTGATCAGATTGTG
AATGAGGCGGCCAAGTTTCGCTATCGAGAGGGTGGGACGGGCATTAATGTTGGGGGTCTCGTCATCCGCATGCCG
TGTGGCGCGGTTGGACACGGTGCTCTATACCACACTCAATCCCCAGAGTCGCTCTTCGCACATATTCCCGGTTTG
CGAGTAGTCATGCCACGCTCCCCTGCTCAAGCAAAGGGGCTACTTCTGTCTTCTATCTTCGAGCACAATGATCCG
GTGATCTTCCTGGAGCCCAAGATCCTCTATCGTGCCGCTGTGGAATATGTCCCGAATGAATACTACACCATCCCG
CTAAGTAAGGCCGAAGTCATCAAGCCTGGCAAGGACTTGACCGTCATCTCATATGGACAGCCTCTTTACCTGTGC
TCTTCTGCTATCTCCGCCATTGAAAAGGCTATGCCGGGTGTTAATGTGGAACTTATTGATCTGCGAACTATATAT
CCCTGGGATAGACAGACTGTTATCGAAAGTGTCAAAAAGACCGGTCGAGCCATTGTCGTGCATGAGAGTATGATC
AACTACGGCGTGGGTGCAGAGGTTGCCTCGACGATACAGGAGAGTGCATTCTTACGTCTTGAAGCCCCTGTCAAG
CGAGTTGCTGGCTGGAGCACACATACTGGGCTGAGTTACGAGCAATTCATTCTGCCCGATGTTACAAGAATCTAC
GACGCAATTAAACAAATACTTGAATATTAA
Transcript >Pro_DTO377G3_2|g5715.t1
ATGAATAGTCAATTCCAGGATTCATTCTGTTTCCAATGGAAAAGACGAGCAAAGATCTCCGTCATTCTATATTCT
ATGTTTTACATTCGATATTCATATTTGCATGATACTGTCCTTTATCAGGGATACTATGCTCCAAAGATGGCTTCT
TTACGAACTCCTTTGCGGTCTTTCGCTCAAGCTCCTCGCCGGTTCTACTCTGGAGCTCCTACTCCGGCAGCGAAG
CTAAACCTACCTATTGACTACAAAACCACTCCGATTTTACACCACACCTCAGCCTCCTTGTCAAATACATCAGAG
TACCCGGCAGCTGCCACGAGTAAACGACTCAATCTCTACCAAGCAATCAACTCAGCATTGCGGACCGCATTGTCC
AAATCCGATCGAACTATTGTGTTTGGCGAGGATGTTGGGTTTGGAGGCGTTTTCCGATGCTCGATGGATCTTCAA
ACAGAATTTGGATCGGATCGGGTCTTCAACACCCCCTTGACCGAACAAGGCATTGCGGGTTTTGCAATTGGGGCA
GCAGCGGAAGGGATGAAGCCTATAGCTGAGATCCAATTCGCCGACTACGTGTTTCCAGCGTTTGATCAGATTGTG
AATGAGGCGGCCAAGTTTCGCTATCGAGAGGGTGGGACGGGCATTAATGTTGGGGGTCTCGTCATCCGCATGCCG
TGTGGCGCGGTTGGACACGGTGCTCTATACCACACTCAATCCCCAGAGTCGCTCTTCGCACATATTCCCGGTTTG
CGAGTAGTCATGCCACGCTCCCCTGCTCAAGCAAAGGGGCTACTTCTGTCTTCTATCTTCGAGCACAATGATCCG
GTGATCTTCCTGGAGCCCAAGATCCTCTATCGTGCCGCTGTGGAATATGTCCCGAATGAATACTACACCATCCCG
CTAAGTAAGGCCGAAGTCATCAAGCCTGGCAAGGACTTGACCGTCATCTCATATGGACAGCCTCTTTACCTGTGC
TCTTCTGCTATCTCCGCCATTGAAAAGGCTATGCCGGGTGTTAATGTGGAACTTATTGATCTGCGAACTATATAT
CCCTGGGATAGACAGACTGTTATCGAAAGTGTCAAAAAGACCGGTCGAGCCATTGTCGTGCATGAGAGTATGATC
AACTACGGCGTGGGTGCAGAGGTTGCCTCGACGATACAGGAGAGTGCATTCTTACGTCTTGAAGCCCCTGTCAAG
CGAGTTGCTGGCTGGAGCACACATACTGGGCTGAGTTACGAGCAATTCATTCTGCCCGATGTTACAAGAATCTAC
GACGCAATTAAACAAATACTTGAATATTAA
Gene >Pro_DTO377G3_2|g5715.t1
ATGAATAGTCAATTCCAGGATTCATTCTGTTTCCAATGGAAAAGACGAGCAAAGATGTATGTTTCCTTTCAAGAT
ACCATCGCAGATTATCTTGAGTCCGATCCATTGGAAGGCAGTGCATAACTAGCGTATAGCTCCGTCATTCTATAT
TCTATGTTTTACATTCGATATTCATATTTGCATGATACTGTCCTTTATCAGGGATACTATGCTGTATGTTGACTT
CGTCATAGGTCCGGTCTGACTTGTGTGACTGGTTTGCCCTGTTTGCATCATCTCGGCTATCCGCGGCGGTTTCCC
CGCGCAATGCCCCGGACAATGAACAAGGAGCAATTTAAAGGCAATCATCCCTACAAAAAAAAAATATTATGTATT
TCCATTCTGTTCACATCCCACAATTCTAGCCAAAGATGGCTTCTTTACGAACTCCTTTGCGGTCTTTCGCTCAAG
CTCCTCGCCGGTTCTACTCTGGAGCTCCTACTCCGGCAGCGAAGCTAAACCTACCTATTGACTACAAAACCACTC
CGATTTTACACCACACCTCAGCCTCCTTGTCAAATACATCAGAGTACCCGGCAGCTGCCACGAGTAAACGACTCA
ATCTCTACCAAGCAATCAACTCAGCATTGCGGACCGCATTGTCCAAATCCGATCGAACTATTGTGTTTGGCGAGG
ATGTTGGGTTTGGAGGCGTTTTCCGATGCTCGATGGATCTTCAAACAGAATTTGGATCGGATCGGGTCTTCAACA
CCCCCTTGACCGAACAAGGCATTGCGGGTTTTGCAATTGGGGCAGCAGCGGAAGGGATGAAGCCTATAGCTGAGA
TCCAATTCGCCGACTACGTGTTTCCAGCGTTTGATCAGATTGTGAATGAGGCGGCCAAGTTTCGCTATCGAGAGG
GTGGGACGGGCATTAATGTTGGGGGTCTCGTCATCCGCATGCCGTGTGGCGCGGTTGGACACGGTGCTCTGTACG
TTACGTGGAGTGCCAAGCAAAGCGGTATGCTAATCAACTGATCGAATAGATACCACACTCAATCCCCAGAGTCGC
TCTTCGCACATATTCCCGGTTTGCGAGTAGTCATGCCACGCTCCCCTGCTCAAGCAAAGGGGCTACTTCTGTCTT
CTATCTTCGAGCACAATGATCCGGTGATCTTCCTGGAGCCCAAGATCCTCTATCGTGCCGCTGTGGAATATGTCC
CGAATGAATACTACACCATCCCGCTAAGTAAGGCCGAAGTCATCAAGCCTGGCAAGGACTTGACCGTCATCTCAT
ATGGACAGCCTCTTTACCTGTGCTCTTCTGCTATCTCCGCCATTGAAAAGGCTATGCCGGGTGTTAATGTGGAAC
TTATTGATCTGCGAACTATATATCCCTGGGATAGACAGACTGTTATCGAAAGTGTCAAAAAGACCGGTCGAGCCA
TTGTCGTGCATGAGAGTATGATCAACTACGGCGTGGGTGCAGAGGTTGCCTCGACGATACAGGAGAGTGCATTCT
TACGTCTTGAAGCCCCTGTCAAGCGAGTTGCTGGCTGGAGCACACATACTGGGCTGAGTTACGAGCAATTCATTC
TGCCCGATGTTACAAGTGAGTGCCCAACGCCCTTCATTTCGTCCTATCATCACTAACCCATAGTATTCTTTGTAG
GAATCTACGACGCAATTAAACAAATACTTGAATATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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