Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5712.t1
Gene name
Locationscaffold_14:218914..219846
Strand-
Gene length (bp)932
Transcript length (bp)882
Coding sequence length (bp)882
Protein length (aa) 294

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05368 NmrA NmrA-like family 1.2E-23 6 225
PF13460 NAD_binding_10 NAD(P)H-binding 1.6E-18 10 156
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.2E-04 8 78

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5712.t1
MANIKVALAGASGNLGPAVLKELLAAGFDVTVLTRQGSDKTFDSRAHVAQVDYESLDSLKAALSGQEAVVSTLHV
GAVPISTHLRLIDVAVAAGVKRFIPSEYGCDTTNPLTSKLPVYGDKVVIQEHLKNVAKESGLSYSFLITGLFLDW
GLEKGLIVNFAGPATLYDGGDRRFSATTLAGIGKGVVGIINNLDATKNSTVYINEARVTQNELLELSGKSLETKV
VQTADLEQQAFAELAKPAPNRTIFATNLILRAVFGEGYGGLFDPEKVSNELFGLKILSKEELRGLIPK*
Coding >Pro_DTO377G3_2|g5712.t1
ATGGCAAACATCAAGGTTGCTCTTGCCGGAGCCAGCGGAAACCTCGGTCCCGCCGTACTCAAGGAACTGCTCGCC
GCAGGCTTTGACGTGACAGTCCTCACCCGACAAGGCAGCGATAAAACCTTCGATTCCCGCGCGCACGTCGCACAA
GTGGACTACGAGTCCCTCGACTCCCTCAAGGCCGCTCTGTCTGGACAAGAAGCCGTAGTCAGCACTCTACATGTC
GGCGCAGTTCCGATATCCACTCATCTGCGCTTGATTGATGTAGCAGTAGCAGCTGGTGTCAAGCGGTTCATCCCG
TCGGAATACGGCTGCGACACCACGAACCCCCTCACGTCCAAATTGCCTGTCTACGGCGATAAGGTCGTCATCCAG
GAACATCTCAAGAATGTCGCTAAGGAATCTGGCCTCAGCTACTCGTTCCTCATTACTGGTCTTTTCCTTGACTGG
GGTCTTGAGAAGGGTCTTATAGTCAATTTTGCTGGCCCGGCGACGCTGTATGATGGCGGTGATCGCCGTTTTAGT
GCGACGACTCTCGCTGGTATTGGCAAGGGAGTTGTTGGGATCATCAACAACCTTGACGCTACTAAGAACTCCACG
GTCTATATCAATGAGGCTAGGGTCACGCAGAATGAGCTCCTGGAATTGTCTGGAAAGAGCCTTGAGACGAAGGTT
GTTCAGACTGCAGATCTGGAACAGCAGGCTTTTGCGGAACTGGCTAAACCGGCCCCCAACCGGACAATCTTTGCT
ACGAATTTGATTCTGCGGGCTGTCTTTGGTGAAGGATACGGCGGTCTTTTCGACCCTGAGAAGGTCTCGAATGAG
TTGTTTGGTCTGAAGATTTTGTCCAAGGAGGAACTCCGCGGCCTGATCCCCAAGTAA
Transcript >Pro_DTO377G3_2|g5712.t1
ATGGCAAACATCAAGGTTGCTCTTGCCGGAGCCAGCGGAAACCTCGGTCCCGCCGTACTCAAGGAACTGCTCGCC
GCAGGCTTTGACGTGACAGTCCTCACCCGACAAGGCAGCGATAAAACCTTCGATTCCCGCGCGCACGTCGCACAA
GTGGACTACGAGTCCCTCGACTCCCTCAAGGCCGCTCTGTCTGGACAAGAAGCCGTAGTCAGCACTCTACATGTC
GGCGCAGTTCCGATATCCACTCATCTGCGCTTGATTGATGTAGCAGTAGCAGCTGGTGTCAAGCGGTTCATCCCG
TCGGAATACGGCTGCGACACCACGAACCCCCTCACGTCCAAATTGCCTGTCTACGGCGATAAGGTCGTCATCCAG
GAACATCTCAAGAATGTCGCTAAGGAATCTGGCCTCAGCTACTCGTTCCTCATTACTGGTCTTTTCCTTGACTGG
GGTCTTGAGAAGGGTCTTATAGTCAATTTTGCTGGCCCGGCGACGCTGTATGATGGCGGTGATCGCCGTTTTAGT
GCGACGACTCTCGCTGGTATTGGCAAGGGAGTTGTTGGGATCATCAACAACCTTGACGCTACTAAGAACTCCACG
GTCTATATCAATGAGGCTAGGGTCACGCAGAATGAGCTCCTGGAATTGTCTGGAAAGAGCCTTGAGACGAAGGTT
GTTCAGACTGCAGATCTGGAACAGCAGGCTTTTGCGGAACTGGCTAAACCGGCCCCCAACCGGACAATCTTTGCT
ACGAATTTGATTCTGCGGGCTGTCTTTGGTGAAGGATACGGCGGTCTTTTCGACCCTGAGAAGGTCTCGAATGAG
TTGTTTGGTCTGAAGATTTTGTCCAAGGAGGAACTCCGCGGCCTGATCCCCAAGTAA
Gene >Pro_DTO377G3_2|g5712.t1
ATGGCAAACATCAAGGTTGCTCTTGCCGGAGTATGTCAGCAAACGACCCTCATACCATCCCATTCTCTAACATGA
TCCAGGCCAGCGGAAACCTCGGTCCCGCCGTACTCAAGGAACTGCTCGCCGCAGGCTTTGACGTGACAGTCCTCA
CCCGACAAGGCAGCGATAAAACCTTCGATTCCCGCGCGCACGTCGCACAAGTGGACTACGAGTCCCTCGACTCCC
TCAAGGCCGCTCTGTCTGGACAAGAAGCCGTAGTCAGCACTCTACATGTCGGCGCAGTTCCGATATCCACTCATC
TGCGCTTGATTGATGTAGCAGTAGCAGCTGGTGTCAAGCGGTTCATCCCGTCGGAATACGGCTGCGACACCACGA
ACCCCCTCACGTCCAAATTGCCTGTCTACGGCGATAAGGTCGTCATCCAGGAACATCTCAAGAATGTCGCTAAGG
AATCTGGCCTCAGCTACTCGTTCCTCATTACTGGTCTTTTCCTTGACTGGGGTCTTGAGAAGGGTCTTATAGTCA
ATTTTGCTGGCCCGGCGACGCTGTATGATGGCGGTGATCGCCGTTTTAGTGCGACGACTCTCGCTGGTATTGGCA
AGGGAGTTGTTGGGATCATCAACAACCTTGACGCTACTAAGAACTCCACGGTCTATATCAATGAGGCTAGGGTCA
CGCAGAATGAGCTCCTGGAATTGTCTGGAAAGAGCCTTGAGACGAAGGTTGTTCAGACTGCAGATCTGGAACAGC
AGGCTTTTGCGGAACTGGCTAAACCGGCCCCCAACCGGACAATCTTTGCTACGAATTTGATTCTGCGGGCTGTCT
TTGGTGAAGGATACGGCGGTCTTTTCGACCCTGAGAAGGTCTCGAATGAGTTGTTTGGTCTGAAGATTTTGTCCA
AGGAGGAACTCCGCGGCCTGATCCCCAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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