Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g5690.t1
Gene name
Location	scaffold_14:154525..157103
Strand	+
Gene length (bp)	2578
Transcript length (bp)	2163
Coding sequence length (bp)	2163
Protein length (aa)	721

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04082	Fungal_trans	Fungal specific transcription factor domain	1.1E-11	296	389
PF00172	Zn_clus	Fungal Zn(2)-Cys(6) binuclear cluster domain	1.7E-09	11	40

GO

GO Term	Description	Terminal node
GO:0003677	DNA binding	Yes
GO:0008270	zinc ion binding	Yes
GO:0006351	transcription, DNA-templated	Yes
GO:0006355	regulation of transcription, DNA-templated	Yes
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Yes
GO:0008152	metabolic process	No
GO:0060255	regulation of macromolecule metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0010556	regulation of macromolecule biosynthetic process	No
GO:0010468	regulation of gene expression	No
GO:0019438	aromatic compound biosynthetic process	No
GO:0008150	biological_process	No
GO:0140110	transcription regulator activity	No
GO:0050789	regulation of biological process	No
GO:0005488	binding	No
GO:2001141	regulation of RNA biosynthetic process	No
GO:0046914	transition metal ion binding	No
GO:0065007	biological regulation	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0009058	biosynthetic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0034654	nucleobase-containing compound biosynthetic process	No
GO:0051252	regulation of RNA metabolic process	No
GO:0043167	ion binding	No
GO:0032774	RNA biosynthetic process	No
GO:0046872	metal ion binding	No
GO:0016070	RNA metabolic process	No
GO:0031323	regulation of cellular metabolic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0043170	macromolecule metabolic process	No
GO:0018130	heterocycle biosynthetic process	No
GO:0044238	primary metabolic process	No
GO:1901576	organic substance biosynthetic process	No
GO:0009059	macromolecule biosynthetic process	No
GO:0009987	cellular process	No
GO:0050794	regulation of cellular process	No
GO:0044237	cellular metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0009889	regulation of biosynthetic process	No
GO:1901363	heterocyclic compound binding	No
GO:0097659	nucleic acid-templated transcription	No
GO:0003700	DNA-binding transcription factor activity	No
GO:0043169	cation binding	No
GO:0080090	regulation of primary metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0031326	regulation of cellular biosynthetic process	No
GO:0019219	regulation of nucleobase-containing compound metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0019222	regulation of metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0051171	regulation of nitrogen compound metabolic process	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0003674	molecular_function	No
GO:0046483	heterocycle metabolic process	No
GO:1903506	regulation of nucleic acid-templated transcription	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	2965
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g3417.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g4762.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g5386.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g92.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g9834.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g3599.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g2376.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g481.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g1899.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g8798.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g724.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g5061.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g1226.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g3729.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g6215.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g4374.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g6916.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g3332.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g2247.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g6471.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g4547.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g1234.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g5644.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g481.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g3024.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g4605.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g4656.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g7603.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g4832.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g1598.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g660.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g1593.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g481.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g5690.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g5690.t1 MAGSSPRSTNACETCRKRKVKCSGDKPCRACIKHNWECTFGHSGRRRFSEAQVKHLLEKVRTYEEQLSSQTVGAP VSSFHSSVVPDETPGRQSAQRSSSSQRQTELLYTDNDPSISPGNLTSLSSSWSACKYELTLHEATDLTSGPAFES QVRSLLDRSHSSDRSFHGSTSNFQYRADRLPQWASVKELVDNVAGVAFPSLEESQHLLDQFLFYLGVSQHFFDPR SFSDDLMLLFQSPETRQQQINSPWFTEYLLVMAMAKLMDVKHPTSQTPGTDLFAEALKRLPPLHHMGGEGVVAVE ILTLIATYLQWCDHKHDAYLYIGLALRLAIALGCNLREVDQRCLPSQSAHRLRLWWTVYMLDRRLSSGLGLAAGA DERQLRTELPRNAMGFQSPVALAINVRIARVTDDIMSTLYGNKSITQLELVQKIQGILQELHDTGRSFPKSLVLD FNRPLQSVTRTGASLYLMLFQAIILCTRPILLQRARFEAQSQQQSRSTEPAPSMLLRLCDTCDEAATRSLAILES LRLQQTIPRYGFFDLDATFSAAFVLVMVGFLDKSQSQPPPALDQASNVLRFLSKSGNLAAERRLQDIAQSYSHVW PNHVFDANTSHSDAATRDTTQTYTISLGPRQDALLASSDPPPYMTVASGGRGDHQDEISLLEPWSNMDVPDAMFD MQGDWNLDLSGEAEGIYSSFHNPTLPLTGVDYIDWLEIEKVFNGP*
Coding	>Pro_DTO377G3_2|g5690.t1 ATGGCGGGCTCCAGCCCACGATCTACCAACGCATGCGAAACATGCCGAAAACGCAAAGTAAAATGTTCCGGTGAT AAACCTTGTCGTGCTTGTATCAAACACAACTGGGAATGCACTTTCGGTCATTCCGGCCGCAGACGGTTTTCTGAA GCCCAAGTGAAACATCTCTTGGAAAAAGTACGAACCTATGAAGAGCAGCTGAGCTCTCAAACTGTAGGGGCTCCG GTCTCTTCATTTCATTCTTCAGTAGTACCAGATGAGACCCCAGGCCGTCAATCTGCGCAACGAAGTTCTTCCAGT CAGAGGCAAACTGAGTTATTATATACCGACAACGATCCTTCTATAAGTCCGGGTAACTTGACATCGCTTTCTTCG TCCTGGTCTGCTTGCAAATATGAACTGACTCTACACGAAGCAACGGACCTGACCTCCGGGCCTGCATTCGAGTCT CAGGTTAGATCGCTTCTTGACAGGTCGCATTCTAGTGACCGCAGCTTCCATGGATCTACTTCAAATTTTCAATAT CGGGCTGATCGGTTACCTCAGTGGGCGTCGGTCAAAGAGCTCGTTGACAATGTTGCTGGAGTAGCTTTCCCGTCT TTGGAAGAATCACAGCACTTGCTTGATCAATTCCTTTTCTATCTTGGCGTGAGCCAGCATTTCTTTGACCCACGA TCTTTCTCGGACGATCTTATGTTGCTATTTCAGAGCCCGGAGACAAGACAACAGCAGATCAACTCTCCTTGGTTT ACAGAATATCTTTTGGTCATGGCCATGGCAAAGCTCATGGATGTAAAACATCCCACATCACAGACACCGGGAACG GACTTGTTCGCTGAAGCGTTGAAGCGTCTTCCTCCGTTGCATCATATGGGTGGGGAAGGTGTTGTCGCCGTCGAG ATACTGACACTGATTGCTACATATCTTCAGTGGTGTGACCATAAACATGATGCATATCTCTATATTGGACTCGCA CTGCGGCTTGCTATTGCTCTTGGGTGCAATCTGCGGGAAGTCGACCAACGCTGCCTCCCTTCTCAAAGTGCCCAC AGATTAAGACTCTGGTGGACAGTGTACATGCTCGACAGGCGCCTCTCTTCAGGTCTCGGGCTGGCTGCAGGAGCC GATGAACGACAGCTACGAACTGAACTCCCGCGGAACGCGATGGGGTTCCAGTCGCCAGTTGCCCTTGCCATCAAT GTCCGTATTGCGCGTGTCACTGATGATATAATGTCAACTCTATATGGAAATAAGTCAATCACCCAACTGGAATTG GTCCAAAAGATCCAGGGAATTCTCCAAGAACTGCATGACACAGGCCGATCATTCCCTAAATCTTTGGTGTTGGAC TTCAATCGACCTTTACAATCGGTAACTCGCACAGGTGCATCATTGTACCTAATGCTGTTTCAGGCCATCATCCTA TGCACACGGCCAATATTACTTCAAAGAGCTCGGTTTGAAGCTCAGAGCCAACAGCAGTCGCGATCTACTGAACCG GCGCCGAGTATGCTGCTGCGTCTCTGTGATACGTGTGACGAGGCAGCCACCAGAAGTCTCGCAATACTTGAATCA CTTCGTCTCCAGCAAACCATCCCCCGGTATGGCTTTTTTGATCTGGACGCAACATTCTCCGCTGCATTTGTTCTG GTCATGGTGGGATTTTTGGACAAATCACAGAGTCAACCACCGCCAGCGCTTGATCAAGCATCTAATGTACTTCGA TTTCTATCAAAGTCTGGCAATCTAGCTGCCGAGCGACGCCTGCAGGATATTGCACAATCTTATTCGCACGTTTGG CCGAATCATGTCTTCGATGCAAATACCTCGCACAGCGATGCAGCTACCCGAGACACGACCCAGACATATACAATA AGTCTAGGCCCAAGACAAGATGCCTTGTTGGCTTCCTCAGATCCTCCACCATACATGACTGTAGCCTCAGGTGGC CGGGGTGACCATCAAGATGAAATCAGTTTACTCGAGCCATGGTCTAACATGGATGTCCCAGACGCAATGTTTGAT ATGCAGGGAGACTGGAATCTAGATCTTTCCGGGGAAGCAGAAGGGATTTATTCTAGTTTCCATAATCCGACATTA CCACTGACCGGGGTTGACTACATCGACTGGTTGGAGATTGAGAAAGTGTTTAACGGTCCATAG
Transcript	>Pro_DTO377G3_2|g5690.t1 ATGGCGGGCTCCAGCCCACGATCTACCAACGCATGCGAAACATGCCGAAAACGCAAAGTAAAATGTTCCGGTGAT AAACCTTGTCGTGCTTGTATCAAACACAACTGGGAATGCACTTTCGGTCATTCCGGCCGCAGACGGTTTTCTGAA GCCCAAGTGAAACATCTCTTGGAAAAAGTACGAACCTATGAAGAGCAGCTGAGCTCTCAAACTGTAGGGGCTCCG GTCTCTTCATTTCATTCTTCAGTAGTACCAGATGAGACCCCAGGCCGTCAATCTGCGCAACGAAGTTCTTCCAGT CAGAGGCAAACTGAGTTATTATATACCGACAACGATCCTTCTATAAGTCCGGGTAACTTGACATCGCTTTCTTCG TCCTGGTCTGCTTGCAAATATGAACTGACTCTACACGAAGCAACGGACCTGACCTCCGGGCCTGCATTCGAGTCT CAGGTTAGATCGCTTCTTGACAGGTCGCATTCTAGTGACCGCAGCTTCCATGGATCTACTTCAAATTTTCAATAT CGGGCTGATCGGTTACCTCAGTGGGCGTCGGTCAAAGAGCTCGTTGACAATGTTGCTGGAGTAGCTTTCCCGTCT TTGGAAGAATCACAGCACTTGCTTGATCAATTCCTTTTCTATCTTGGCGTGAGCCAGCATTTCTTTGACCCACGA TCTTTCTCGGACGATCTTATGTTGCTATTTCAGAGCCCGGAGACAAGACAACAGCAGATCAACTCTCCTTGGTTT ACAGAATATCTTTTGGTCATGGCCATGGCAAAGCTCATGGATGTAAAACATCCCACATCACAGACACCGGGAACG GACTTGTTCGCTGAAGCGTTGAAGCGTCTTCCTCCGTTGCATCATATGGGTGGGGAAGGTGTTGTCGCCGTCGAG ATACTGACACTGATTGCTACATATCTTCAGTGGTGTGACCATAAACATGATGCATATCTCTATATTGGACTCGCA CTGCGGCTTGCTATTGCTCTTGGGTGCAATCTGCGGGAAGTCGACCAACGCTGCCTCCCTTCTCAAAGTGCCCAC AGATTAAGACTCTGGTGGACAGTGTACATGCTCGACAGGCGCCTCTCTTCAGGTCTCGGGCTGGCTGCAGGAGCC GATGAACGACAGCTACGAACTGAACTCCCGCGGAACGCGATGGGGTTCCAGTCGCCAGTTGCCCTTGCCATCAAT GTCCGTATTGCGCGTGTCACTGATGATATAATGTCAACTCTATATGGAAATAAGTCAATCACCCAACTGGAATTG GTCCAAAAGATCCAGGGAATTCTCCAAGAACTGCATGACACAGGCCGATCATTCCCTAAATCTTTGGTGTTGGAC TTCAATCGACCTTTACAATCGGTAACTCGCACAGGTGCATCATTGTACCTAATGCTGTTTCAGGCCATCATCCTA TGCACACGGCCAATATTACTTCAAAGAGCTCGGTTTGAAGCTCAGAGCCAACAGCAGTCGCGATCTACTGAACCG GCGCCGAGTATGCTGCTGCGTCTCTGTGATACGTGTGACGAGGCAGCCACCAGAAGTCTCGCAATACTTGAATCA CTTCGTCTCCAGCAAACCATCCCCCGGTATGGCTTTTTTGATCTGGACGCAACATTCTCCGCTGCATTTGTTCTG GTCATGGTGGGATTTTTGGACAAATCACAGAGTCAACCACCGCCAGCGCTTGATCAAGCATCTAATGTACTTCGA TTTCTATCAAAGTCTGGCAATCTAGCTGCCGAGCGACGCCTGCAGGATATTGCACAATCTTATTCGCACGTTTGG CCGAATCATGTCTTCGATGCAAATACCTCGCACAGCGATGCAGCTACCCGAGACACGACCCAGACATATACAATA AGTCTAGGCCCAAGACAAGATGCCTTGTTGGCTTCCTCAGATCCTCCACCATACATGACTGTAGCCTCAGGTGGC CGGGGTGACCATCAAGATGAAATCAGTTTACTCGAGCCATGGTCTAACATGGATGTCCCAGACGCAATGTTTGAT ATGCAGGGAGACTGGAATCTAGATCTTTCCGGGGAAGCAGAAGGGATTTATTCTAGTTTCCATAATCCGACATTA CCACTGACCGGGGTTGACTACATCGACTGGTTGGAGATTGAGAAAGTGTTTAACGGTCCATAG
Gene	>Pro_DTO377G3_2|g5690.t1 ATGGCGGGCTCCAGCCCACGATCTACCAACGCGTAAGTGTGTAATGCGTCTGCATCTCCGGCTGCGGGGGATCAT GTATGATAACAACCGGACAGATGCGAAACATGCCGAAAACGCAAAGTAAAATGTTCCGGTGATAAACCTTGTCGT GCTTGTATCAAACACAACTGGGAATGCACTTTCGGTCATTCCGGCCGCAGACGGTTTTCTGAAGCGTACGTTCAT ATGCGTCGTATGATCTGGCTAGTCTTGCTGATTGGCAAATAGCCAAGTGAAACATCTCTTGGAAAAAGTACGAAC CTATGAAGAGCAGCTGAGCTCTCAAACTGTAGGGGCTCCGGTCTCTTCATTTCATTCTTCAGTAGTACCAGATGA GACCCCAGGCCGTCAATCTGCGCAACGAAGTTCTTCCAGTCAGAGGCAAACTGAGTTATTATATACCGACAACGA TCCTTCTATAAGTCCGGGTAACTTGACATCGCTTTCTTCGTCCTGGTCTGCTTGCAAATATGAACTGACTCTACA CGAAGCAACGGACCTGACCTCCGGGCCTGCATTCGAGTCTCAGGTTAGATCGCTTCTTGACAGGTCGCATTCTAG TGACCGCAGCTTCCATGGATCTACTTCAAATTTTCAATATCGGGCTGATCGGTTACCTCAGTGGGCGTCGGTCAA AGAGCTCGTTGACAATGTTGCTGGAGTAGCTTTCCCGTCTTTGGAAGAATCACAGCACTTGCTTGATCAATTCCT TTTCTATCTTGGCGTGAGCCAGCATTTCTTTGACCCACGATCTTTCTCGGACGATCTTATGTTGCTATTTCAGAG CCCGGAGACAAGACAACAGCAGATCAACTCTCCTTGGTTTACAGAATATCTTTTGGTCATGGCCATGGCAAAGCT CATGGATGTAAAACATCCCACATCACAGACACCGGGAACGGACTTGTTCGCTGAAGCGTTGAAGCGTCTTCCTCC GTTGCATCATATGGGTGGGGAAGGTGTTGTCGCCGTCGAGATACTGACACTGATTGCTACATATCTTCAGTGGTG TGACCATAAACATGATGCATATCTCTATGTACGTTGTGTAAGATCCACAATGCTCTTGCACAGTATCATTGACGT GTGGTAGATTGGACTCGCACTGCGGCTTGCTATTGCTCTTGGGTGCAATCTGCGGGAAGTCGACCAACGCTGCCT CCCTTCTCAAAGTGCCCACAGATTAAGACTCTGGTGGACAGTGTACATGCTCGACAGGTAGGCCCTTTGGCAACT TTAGGGGCTTGGCACTCAACTTACACTTCTAGGCGCCTCTCTTCAGGTCTCGGGCTGGCTGCAGGAGCCGATGAA CGACAGCTACGAACTGAACTCCCGCGGAACGCGATGGGGTTCCAGTCGCCAGTTGCCCTTGCCATCAATGTCCGT ATTGCGCGTGTCACTGATGATATAATGTCAAGTAGGATATACACCGTTGTGCTATTGGCATCATGCTAATACACC TACAACAGCTCTATATGGAAATAAGTCAATCACCCAACTGGAATTGGTCCAAAAGATCCAGGGAATTCTCCAAGA ACTGCATGACACAGGCCGATCATTCCCTAAATCTTTGGTGTTGGACTTCAATCGACCTTTACAATCGGTAACTCG CACAGGTGCATCATTGTACCTAATGCTGTTTCAGGTGGGACGATCACCAACAGAAAATATTATTGGTATTGTTCC TGATTCGTTATTAGGCCATCATCCTATGCACACGGCCAATATTACTTCAAAGAGCTCGGTTTGAAGCTCAGAGCC AACAGCAGTCGCGATCTACTGAACCGGCGCCGAGTATGCTGCTGCGTCTCTGTGATACGTGTGACGAGGCAGCCA CCAGAAGTCTCGCAATACTTGAATCACTTCGTCTCCAGCAAACCATCCGTGAGTCCTTCCAGTGCTCTAACCTAA CAGACCCTACATCCCCCAGTTTATGTTTAGTTATTCAAATCAAGAGCTGACATAAACACAAGCCCGGTATGGCTT TTTTGATCTGGACGCAACATTCTCCGCTGCATTTGTTCTGGTCATGGTGGGATTTTTGGACAAATCACAGAGTCA ACCACCGCCAGCGCTTGATCAAGCATCTAATGTACTTCGATTTCTATCAAAGTCTGGCAATCTAGCTGCCGAGCG ACGCCTGCAGGATATTGCACAATCTTATTCGCACGTTTGGCCGAATCATGTCTTCGATGCAAATACCTCGCACAG CGATGCAGCTACCCGAGACACGACCCAGACATATACAATAAGTCTAGGCCCAAGACAAGATGCCTTGTTGGCTTC CTCAGATCCTCCACCATACATGACTGTAGCCTCAGGTGGCCGGGGTGACCATCAAGATGAAATCAGTTTACTCGA GCCATGGTCTAACATGGATGTCCCAGACGCAATGTTTGATATGCAGGGAGACTGGAATCTAGATCTTTCCGGGGA AGCAGAAGGGATTTATTCTAGTTTCCATAATCCGACATTACCACTGACCGGGGTTGACTACATCGACTGGTTGGA GATTGAGAAAGTGTTTAACGGTCCATAG