© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g5684.t1 |
| Gene name | |
| Location | scaffold_14:138080..139183 |
| Strand | - |
| Gene length (bp) | 1103 |
| Transcript length (bp) | 978 |
| Coding sequence length (bp) | 978 |
| Protein length (aa) | 326 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04616 | Glyco_hydro_43 | Glycosyl hydrolases family 43 | 6.9E-34 | 29 | 320 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g5684.t1 MFGLIPLLFTALASAYPNRGPCTGDCWAHDPAMIQRVSDGKYYRFSTGTGVSIHSSPSVKGPWTDLGSALPDGSK ITLDGVDSKNIWAPDVHYQNDQYYMYYVLSQIGTQNSQIGVATSKTMDPGSWTDHGSVGLPANDNYNRIDPAWIS IGGKNYMNFGSFWGDIFQVQMDTPLQVGGATPYQISWNATLNHREEGSYEFKHGDYYYLLYSAGIAGKYTKTFPA EGAEYHIRVCRSKTGLGDFVDADGKSCKETGGTMLLASHGQVFGPGGPGVVNDKDLGVVMYYHYYPLATKQSTDV SDNANYRYAWNVLGWKDGWPFVKAT* |
| Coding | >Pro_DTO377G3_2|g5684.t1 ATGTTTGGTCTCATTCCGCTGCTATTTACTGCACTCGCCAGCGCATACCCTAACAGGGGCCCTTGCACAGGCGAT TGTTGGGCTCATGACCCAGCCATGATCCAGCGTGTGTCGGATGGGAAATACTACCGCTTTTCGACGGGCACCGGT GTCAGCATTCATAGCTCGCCGTCCGTGAAGGGTCCATGGACGGACCTTGGCTCGGCGTTGCCAGATGGGTCTAAG ATTACCCTCGATGGTGTGGACAGCAAGAATATCTGGGCCCCTGATGTCCACTACCAGAACGACCAGTACTACATG TACTATGTCCTGTCACAGATCGGCACCCAGAATTCACAGATCGGTGTCGCAACATCCAAGACCATGGATCCAGGG AGCTGGACAGACCATGGCTCCGTTGGTCTCCCTGCAAACGACAACTACAACCGTATCGATCCCGCCTGGATCAGC ATCGGCGGCAAGAACTATATGAACTTTGGTTCCTTCTGGGGCGATATCTTCCAGGTCCAGATGGACACTCCTCTG CAAGTTGGCGGCGCAACTCCCTATCAAATCTCGTGGAACGCTACTCTCAACCACCGCGAGGAGGGTTCATACGAG TTCAAGCACGGCGACTACTACTACCTGCTCTACTCTGCTGGTATTGCGGGCAAGTACACAAAGACATTCCCAGCT GAGGGTGCCGAGTACCACATTCGTGTTTGCCGATCCAAGACCGGTCTTGGTGACTTTGTTGATGCAGATGGAAAG TCCTGCAAGGAGACCGGAGGCACCATGCTCCTCGCAAGCCACGGCCAGGTATTTGGACCCGGCGGCCCTGGTGTT GTCAATGACAAGGACCTCGGTGTGGTCATGTACTACCACTACTACCCCCTTGCCACCAAGCAGAGCACCGATGTC TCCGACAACGCGAACTATAGGTACGCCTGGAACGTTCTCGGCTGGAAGGACGGATGGCCTTTCGTCAAGGCCACT TAA |
| Transcript | >Pro_DTO377G3_2|g5684.t1 ATGTTTGGTCTCATTCCGCTGCTATTTACTGCACTCGCCAGCGCATACCCTAACAGGGGCCCTTGCACAGGCGAT TGTTGGGCTCATGACCCAGCCATGATCCAGCGTGTGTCGGATGGGAAATACTACCGCTTTTCGACGGGCACCGGT GTCAGCATTCATAGCTCGCCGTCCGTGAAGGGTCCATGGACGGACCTTGGCTCGGCGTTGCCAGATGGGTCTAAG ATTACCCTCGATGGTGTGGACAGCAAGAATATCTGGGCCCCTGATGTCCACTACCAGAACGACCAGTACTACATG TACTATGTCCTGTCACAGATCGGCACCCAGAATTCACAGATCGGTGTCGCAACATCCAAGACCATGGATCCAGGG AGCTGGACAGACCATGGCTCCGTTGGTCTCCCTGCAAACGACAACTACAACCGTATCGATCCCGCCTGGATCAGC ATCGGCGGCAAGAACTATATGAACTTTGGTTCCTTCTGGGGCGATATCTTCCAGGTCCAGATGGACACTCCTCTG CAAGTTGGCGGCGCAACTCCCTATCAAATCTCGTGGAACGCTACTCTCAACCACCGCGAGGAGGGTTCATACGAG TTCAAGCACGGCGACTACTACTACCTGCTCTACTCTGCTGGTATTGCGGGCAAGTACACAAAGACATTCCCAGCT GAGGGTGCCGAGTACCACATTCGTGTTTGCCGATCCAAGACCGGTCTTGGTGACTTTGTTGATGCAGATGGAAAG TCCTGCAAGGAGACCGGAGGCACCATGCTCCTCGCAAGCCACGGCCAGGTATTTGGACCCGGCGGCCCTGGTGTT GTCAATGACAAGGACCTCGGTGTGGTCATGTACTACCACTACTACCCCCTTGCCACCAAGCAGAGCACCGATGTC TCCGACAACGCGAACTATAGGTACGCCTGGAACGTTCTCGGCTGGAAGGACGGATGGCCTTTCGTCAAGGCCACT TAA |
| Gene | >Pro_DTO377G3_2|g5684.t1 ATGTTTGGTCTCATTCCGCTGCTATTTACTGCACTCGCCAGCGCATACCCTAACAGGGGCCCTTGCACAGGCGAT TGTTGGGCTCATGACCCAGCCATGATCCAGCGTGTGTCGGATGGGAAATACTACCGCTTTTCGACGGGCACCGGT GTCAGCATTCATAGCTCGCCGTCCGTGAAGGGTCCATGGACGGACCTTGGCTCGGCGTTGCCAGATGGGTCTAAG ATTACCCTCGATGGTGTGGACAGCAAGAATATCTGGGTAAGAATGACCTGAAAACGCAACTGGGAACAATATCAA GGCCAATGGCTAACATGATTCACCTTATAGGCCCCTGATGTCCACTACCAGAACGACCAGTACTACATGTACTAT GTCCTGTCACAGATCGGCACCCAGAATTCACAGATCGGTGTCGCAACATCCAAGACCATGGATCCAGGGAGCTGG ACAGACCATGGCTCCGTTGGTCTCCCTGCAAACGACAACTACAACCGTATCGATCCCGCCTGGATCAGCATCGGC GGCAAGAACTATATGAACTTTGGTTCCTTCTGGGGCGATATCTTCCAGGTCCAGATGGACACTCCTCTGCAAGTT GGCGGCGCAACTCCCTATCAAATCTCGTGGAACGCTACTCTCAACCACCGCGAGGAGGGTTCATACGAGTTCAAG CACGGCGACTACTACTACCTGCTCTACTCTGCTGGTATTGCGGGCAAGTACACAAAGACATTCCCAGCTGAGGGT GCCGAGTACCACATTCGTGTTTGCCGATCCAAGACCGGTCTTGGTGACTTTGTATGTTTCCCGTCTTTGTTCATT CGTCAAGACACGTTCTAACATTTGAGTTACAGGTTGATGCAGATGGAAAGTCCTGCAAGGAGACCGGAGGCACCA TGCTCCTCGCAAGCCACGGCCAGGTATTTGGACCCGGCGGCCCTGGTGTTGTCAATGACAAGGACCTCGGTGTGG TCATGTACTACCACTACTACCCCCTTGCCACCAAGCAGAGCACCGATGTCTCCGACAACGCGAACTATAGGTACG CCTGGAACGTTCTCGGCTGGAAGGACGGATGGCCTTTCGTCAAGGCCACTTAA |