Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5672.t1
Gene name
Locationscaffold_14:94225..96163
Strand-
Gene length (bp)1938
Transcript length (bp)702
Coding sequence length (bp)702
Protein length (aa) 234

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00069 Pkinase Protein kinase domain 1.2E-12 30 119
PF07714 PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 2.2E-06 31 97

GO

GO Term Description Terminal node
GO:0004672 protein kinase activity Yes
GO:0005524 ATP binding Yes
GO:0006468 protein phosphorylation Yes
GO:0017076 purine nucleotide binding No
GO:0008152 metabolic process No
GO:0000166 nucleotide binding No
GO:0043170 macromolecule metabolic process No
GO:0016740 transferase activity No
GO:0030554 adenyl nucleotide binding No
GO:0071704 organic substance metabolic process No
GO:0036211 protein modification process No
GO:0097367 carbohydrate derivative binding No
GO:0006796 phosphate-containing compound metabolic process No
GO:0008150 biological_process No
GO:0019538 protein metabolic process No
GO:0043167 ion binding No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0032559 adenyl ribonucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0140096 catalytic activity, acting on a protein No
GO:0003824 catalytic activity No
GO:0032553 ribonucleotide binding No
GO:0044238 primary metabolic process No
GO:0016773 phosphotransferase activity, alcohol group as acceptor No
GO:0009987 cellular process No
GO:1901564 organonitrogen compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0016310 phosphorylation No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0006793 phosphorus metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0006807 nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0043412 macromolecule modification No
GO:0036094 small molecule binding No
GO:0016301 kinase activity No
GO:0005488 binding No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 3.95 0.56 7.34
5d_25C Five days - 25 degrees Celsius 6.73 1.46 12.00
7d_25C Seven days - 25 degrees Celsius 8.85 2.34 15.37
10d_25C Ten days - 25 degrees Celsius 8.14 2.02 14.25
7d_15C Seven days - 15 degrees Celsius 7.76 1.92 13.60
7d_30C Seven days - 30 degrees Celsius 6.87 1.65 12.09

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.297696 no
3d_25C 7d_25C 0.077499 no
3d_25C 7d_15C 0.147337 no
3d_25C 7d_30C 0.247901 no
3d_25C 10d_25C 0.118954 no
5d_25C 7d_25C 0.600189 no
5d_25C 7d_15C 0.812235 no
5d_25C 7d_30C 0.977250 no
5d_25C 10d_25C 0.740420 no
7d_25C 7d_15C 0.821694 no
7d_25C 7d_30C 0.624590 no
7d_25C 10d_25C 0.894376 no
7d_15C 7d_30C 0.832546 no
7d_15C 10d_25C 0.939223 no
7d_30C 10d_25C 0.763035 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5672.t1
MAFKIDSTGRPVYQSRNDFGPLKSLRSIPQLIDFGLATRLEEDDDYGIWPIQPDHYRAPEVILGNGWRMPTDIWN
LGVLLWDMIEGKELFRHIHDQQGRYDAKLHLAEMIALLGPPPPEVIQRYQYMREYSWPEPVRREDDRVCEIAEEY
FCGPFFDSNGRFLYEDLIPDRKLYDTVSFLEGKEREAFLDLAKGMLRIEFLLLDIAEIVRPSISPLQSHLDQLVN
QMRDNKAV*
Coding >Pro_DTO377G3_2|g5672.t1
ATGGCTTTCAAGATTGATTCGACAGGACGACCAGTGTATCAGTCCCGTAATGACTTCGGGCCACTTAAAAGCCTG
AGAAGTATACCACAGCTTATCGACTTTGGCTTGGCAACCAGACTCGAGGAAGACGACGACTACGGCATCTGGCCT
ATTCAGCCAGACCACTATCGGGCGCCAGAGGTGATATTGGGTAATGGATGGCGAATGCCTACGGATATTTGGAAT
CTTGGTGTTCTATTGTGGGATATGATCGAAGGAAAAGAGCTATTTCGGCATATCCATGATCAACAAGGTCGTTAC
GATGCTAAACTACACCTCGCCGAAATGATAGCTTTACTCGGTCCACCCCCTCCAGAGGTCATACAAAGGTATCAA
TATATGCGAGAGTACTCGTGGCCGGAACCTGTCAGACGAGAAGACGACAGAGTATGCGAGATCGCGGAGGAGTAC
TTCTGCGGCCCATTCTTTGACAGTAATGGTCGCTTTCTTTACGAAGACCTGATCCCCGACCGGAAACTATACGAC
ACAGTTTCCTTCCTTGAAGGAAAGGAGAGGGAAGCGTTTCTGGATCTCGCCAAGGGAATGCTTCGCATTGAATTT
CTCTTACTGGACATTGCGGAGATTGTTCGACCGAGTATCAGCCCGCTGCAATCTCACCTCGACCAGCTCGTTAAC
CAGATGAGGGATAACAAGGCTGTCTAA
Transcript >Pro_DTO377G3_2|g5672.t1
ATGGCTTTCAAGATTGATTCGACAGGACGACCAGTGTATCAGTCCCGTAATGACTTCGGGCCACTTAAAAGCCTG
AGAAGTATACCACAGCTTATCGACTTTGGCTTGGCAACCAGACTCGAGGAAGACGACGACTACGGCATCTGGCCT
ATTCAGCCAGACCACTATCGGGCGCCAGAGGTGATATTGGGTAATGGATGGCGAATGCCTACGGATATTTGGAAT
CTTGGTGTTCTATTGTGGGATATGATCGAAGGAAAAGAGCTATTTCGGCATATCCATGATCAACAAGGTCGTTAC
GATGCTAAACTACACCTCGCCGAAATGATAGCTTTACTCGGTCCACCCCCTCCAGAGGTCATACAAAGGTATCAA
TATATGCGAGAGTACTCGTGGCCGGAACCTGTCAGACGAGAAGACGACAGAGTATGCGAGATCGCGGAGGAGTAC
TTCTGCGGCCCATTCTTTGACAGTAATGGTCGCTTTCTTTACGAAGACCTGATCCCCGACCGGAAACTATACGAC
ACAGTTTCCTTCCTTGAAGGAAAGGAGAGGGAAGCGTTTCTGGATCTCGCCAAGGGAATGCTTCGCATTGAATTT
CTCTTACTGGACATTGCGGAGATTGTTCGACCGAGTATCAGCCCGCTGCAATCTCACCTCGACCAGCTCGTTAAC
CAGATGAGGGATAACAAGGCTGTCTAA
Gene >Pro_DTO377G3_2|g5672.t1
ATGGCTTTCAAGATTGATTCGACAGGACGACCAGTGTATCAGTCCCGTAATGACTTCGGGCCACTTAAAAGCCTG
AGAAGTATACCACAGCTTATCGACTTTGGCTTGGCAACCAGACTCGAGGAAGACGACGACTACGGCATCTGGCCT
ATTCAGCCAGACCACTATCGGGCGCCAGAGGTGATATTGGGTAATGGATGGCGAATGCCTACGGATATTTGGAAT
CTTGGTGTTCTAGTACGTCCCGCTTTTCTCTAAAGTTGTTATTATCCACTAATGCCGGACCAGTTGTGGGATATG
ATCGAAGGAAAAGAGCTATTTCGGCATATCCATGATCAACAAGGTCGTTACGATGCTAAACTACACCTCGCCGAA
ATGATAGCTTTACTCGGTCCACCCCCTCCAGAGGTCATACAAAGGTATCAATATATGCGAGAGTACTCGTGGCCG
GAACCTGTCAGACGAGAAGACGACAGAGTATGCGAGATCGCGGAGGAGTACTTCTGCGGCCCATTCTTTGACAGT
AATGGTATCACTAGGTTTCCTATCTTGAACGAATTATTCTTAGACTCACGAAATATCTTAGGTCGCTTTCTTTAC
GAAGACCTGATCCCCGACCGGAAACTATACGACACAGTTTCCTTCCTTGAAGGAAAGGAGAGGGAAGCGTTTCTG
GATCTCGCCAAGGGAATGCTTGTCTGGCATCCAGATGCGAGAAAAACGGCAGGCGAACTGGCGGGGCATCCTTTT
CTTCAACCAAAACAGACAAGCGCCTGATTGCTGCGAGCGTTTGCTAGCGGAATGACTCAAAATCGTGGTTGATCC
CAGTTCGGCGGTTCCATCAAATGGTCAGTTGAAGCGTTAACGTAGTTGTCTTTTTGAATGACATCTAATAGAGTC
AGTTGATCTGTTTTTGATCGGAAAGTAATAGCATTATGCCTTAAATGGGATCGAAGACATCGAATTAAATCAAAT
AAATCAAATTCCCAAGGTACCCCCAAAGGGGTATCACACCCGTTGAACATTCGCGCGAGCAACAGAGGAACAGGG
TGAATAAATCAATTAAATTAATGGATTGAAGTCCAGACCCTCCATAGCAGGCAGCCTCCTAAGGAAACCCGGTAC
GTATAGTTACATATGGATTGCTATTGTATGTAAATGCACCTAAACGCTGACATCACATTGTAAGCTCGTACCTTC
CGTATAAACTATCGCCTCCCTGTATGTAGGTAGTCTGTGGAATGCCCTATTTGCCTATTTAATACGCGTCACAGC
TATATAAGCAGCTCCTTTACTTGTTTGTAGAGAATCAACTCTTCTTCTCTTTCCCTCCTTCGCTCTCTGAGCGTC
TTAACATAGTTACGAACTTCACATCAACAATCATTCGCACAACAAAATGTTTGATAGAACCATCTGTTGCTCTTT
CTTGCTTTTGGCTCTGTCTAGTAAGTTTGACCTCAGCTTGATCCTATTTTGACCTGATTTTGACCTCTCTTTTAG
CTGCAATGGTGATTCGAGAGGAGGGGGTCGAGTCCCTAGTGGCGAAACTCGTCCGCCTGGCTGAAGAGAAGAGAA
GGGTGATTGAGTGATGAGCAACGTGGCCAGCAATCTCATCTGGATGATCGTTGTCTGCGCTGCGGCCCTATAGCG
CATTGAATTTCTCTTACTGGACATTGCGGAGATTGTTCGACCGGTATGTCGCTGTGTCCCATGCACATAATCTTG
CCCGCATCGAATTGTGAAGTTATTCTCACTTCCTCGATATCACCGGACATCCAGCTCACCAGATTCCTTTTCAGT
TGGCCCTCACTAGAGTATCAGCCCGCTGCAATCTCACCTCGGTAGCGCACATCTGAATGTTTTGTGTAAGGTACA
CGACTAACATATACATATCTAGACCAGCTCGTTAACCAGATGAGGGATAACAAGGCTGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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