Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5636.t1
Gene name
Locationscaffold_13:636089..637639
Strand+
Gene length (bp)1550
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00650 CRAL_TRIO CRAL/TRIO domain 1.6E-22 138 317
PF03765 CRAL_TRIO_N CRAL/TRIO, N-terminal domain 4.2E-10 53 109

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5636.t1
MFWGNKTPQDSGEDLARTDSATKNDPAASASQASGTAWLAGHLHHLTPEQEEKLEEFKKVCAERKYYTPAVKQAD
GVEAKPASQDDATLLRFLRARKFDVEGAWAQFKDTEDWRKDNAIEELYANIKIDSYEAARRMYPQWTGRRDRRGI
PVYVFQIRHLDHKAVAAYNSTMNSGTPETHKSSKVPARLLNLFALYENLLRFVMPLSSALPRPNPETPIVTSTNI
VDVGGVGLKQFWNLKGHMQDASVLATAHYPETLDRIFIIGAPAFFPTVWGWIKRWFDPGTTSKIFILSASEVTPT
LNSFMEPTSIPKQFGGELDWAWGDMPNLDEPTSELLRGIEQPLAEGQKRREIIKGPVLFNGDHLQVLGTMDGTQT
KRREIVPIPKLQASVESEANSDSSAEKAAPNGAETKVDDSEKTIDNVAVKIDQLSVDENHVSV*
Coding >Pro_DTO377G3_2|g5636.t1
ATGTTTTGGGGCAACAAAACTCCGCAGGACTCCGGAGAGGACCTGGCCCGCACCGATTCAGCTACGAAGAACGAT
CCCGCCGCATCCGCCTCACAAGCTTCCGGCACCGCCTGGCTCGCCGGGCACTTGCACCACCTTACACCGGAGCAG
GAGGAAAAGCTGGAAGAGTTCAAGAAAGTGTGCGCTGAGCGGAAATATTACACCCCTGCCGTGAAACAAGCAGAT
GGCGTCGAGGCGAAGCCGGCCAGCCAGGACGATGCGACTTTATTGCGATTCCTCCGAGCTCGCAAGTTCGACGTT
GAGGGCGCGTGGGCCCAATTCAAGGACACCGAAGACTGGCGCAAAGACAACGCCATCGAGGAGCTGTATGCGAAT
ATCAAGATTGACTCATATGAAGCCGCTCGGCGGATGTATCCCCAATGGACTGGCCGTCGCGATCGCCGCGGAATC
CCCGTCTACGTCTTCCAGATCCGCCACCTGGATCACAAGGCTGTCGCCGCTTACAACTCCACCATGAATAGCGGT
ACACCCGAGACGCACAAATCATCCAAAGTTCCTGCGCGCTTGTTGAATCTCTTCGCGTTGTATGAGAACCTTCTG
CGCTTCGTGATGCCGCTCTCCTCGGCGCTGCCACGTCCGAACCCGGAGACGCCTATCGTGACGTCGACCAATATC
GTGGATGTCGGCGGTGTCGGGCTGAAGCAGTTCTGGAACTTGAAGGGTCACATGCAGGATGCTAGTGTTTTGGCC
ACGGCGCATTACCCGGAGACATTAGATCGGATCTTTATCATCGGAGCACCCGCATTCTTTCCAACCGTCTGGGGC
TGGATCAAGCGCTGGTTTGACCCAGGAACCACCTCGAAGATCTTCATTCTCTCCGCCTCAGAGGTCACGCCCACT
CTCAACTCCTTCATGGAGCCAACCAGCATCCCCAAGCAATTCGGTGGCGAGCTGGACTGGGCGTGGGGCGATATG
CCCAACCTGGACGAGCCCACCAGCGAGCTGCTCCGCGGCATCGAGCAACCGCTCGCCGAGGGCCAAAAGCGGAGA
GAAATCATCAAGGGACCTGTTCTGTTCAACGGCGATCACCTCCAGGTCCTAGGCACTATGGATGGAACGCAGACG
AAGCGGAGAGAAATCGTTCCCATCCCGAAACTCCAGGCTTCGGTTGAGTCAGAGGCTAACTCCGATAGCTCTGCA
GAGAAGGCGGCGCCTAATGGCGCAGAGACTAAGGTAGACGATAGCGAGAAAACCATCGACAACGTGGCGGTCAAA
ATCGACCAGTTATCCGTCGATGAGAATCATGTTTCCGTATAG
Transcript >Pro_DTO377G3_2|g5636.t1
ATGTTTTGGGGCAACAAAACTCCGCAGGACTCCGGAGAGGACCTGGCCCGCACCGATTCAGCTACGAAGAACGAT
CCCGCCGCATCCGCCTCACAAGCTTCCGGCACCGCCTGGCTCGCCGGGCACTTGCACCACCTTACACCGGAGCAG
GAGGAAAAGCTGGAAGAGTTCAAGAAAGTGTGCGCTGAGCGGAAATATTACACCCCTGCCGTGAAACAAGCAGAT
GGCGTCGAGGCGAAGCCGGCCAGCCAGGACGATGCGACTTTATTGCGATTCCTCCGAGCTCGCAAGTTCGACGTT
GAGGGCGCGTGGGCCCAATTCAAGGACACCGAAGACTGGCGCAAAGACAACGCCATCGAGGAGCTGTATGCGAAT
ATCAAGATTGACTCATATGAAGCCGCTCGGCGGATGTATCCCCAATGGACTGGCCGTCGCGATCGCCGCGGAATC
CCCGTCTACGTCTTCCAGATCCGCCACCTGGATCACAAGGCTGTCGCCGCTTACAACTCCACCATGAATAGCGGT
ACACCCGAGACGCACAAATCATCCAAAGTTCCTGCGCGCTTGTTGAATCTCTTCGCGTTGTATGAGAACCTTCTG
CGCTTCGTGATGCCGCTCTCCTCGGCGCTGCCACGTCCGAACCCGGAGACGCCTATCGTGACGTCGACCAATATC
GTGGATGTCGGCGGTGTCGGGCTGAAGCAGTTCTGGAACTTGAAGGGTCACATGCAGGATGCTAGTGTTTTGGCC
ACGGCGCATTACCCGGAGACATTAGATCGGATCTTTATCATCGGAGCACCCGCATTCTTTCCAACCGTCTGGGGC
TGGATCAAGCGCTGGTTTGACCCAGGAACCACCTCGAAGATCTTCATTCTCTCCGCCTCAGAGGTCACGCCCACT
CTCAACTCCTTCATGGAGCCAACCAGCATCCCCAAGCAATTCGGTGGCGAGCTGGACTGGGCGTGGGGCGATATG
CCCAACCTGGACGAGCCCACCAGCGAGCTGCTCCGCGGCATCGAGCAACCGCTCGCCGAGGGCCAAAAGCGGAGA
GAAATCATCAAGGGACCTGTTCTGTTCAACGGCGATCACCTCCAGGTCCTAGGCACTATGGATGGAACGCAGACG
AAGCGGAGAGAAATCGTTCCCATCCCGAAACTCCAGGCTTCGGTTGAGTCAGAGGCTAACTCCGATAGCTCTGCA
GAGAAGGCGGCGCCTAATGGCGCAGAGACTAAGGTAGACGATAGCGAGAAAACCATCGACAACGTGGCGGTCAAA
ATCGACCAGTTATCCGTCGATGAGAATCATGTTTCCGTATAG
Gene >Pro_DTO377G3_2|g5636.t1
ATGTTTTGGGGCAACAAAACTCCGCAGGACTCCGGAGAGGACCTGGCCCGCACCGATTCAGCTACGAAGAACGAT
CCCGCCGCATCCGCCTCACAAGCTTCCGGCACCGCCTGGCTCGCCGGGCACTTGCACCACCTTACACCGGAGCAG
GAGGAAAAGCTGGAAGAGTTCAAGAAAGTGTGCGCTGAGCGGAAATATTACACCCCTGCCGTGAAACAAGCAGAT
GGCGTCGAGGCGAAGCCGGCCAGCCAGGACGATGCGACTTTATTGTATGTGAATGTGGCGCGTCCACCTTAAACC
CCAATCCAGCTAGAAATGAACAAAATCAAACCGAACGATTGAGTGCTGACTTTGATTATTTGCGCAGGCGATTCC
TCCGAGCTCGCAAGTTCGACGTTGAGGGCGCGTGGGCCCAATTCAAGGACACCGAAGACTGGCGCAAAGACAACG
CCATCGAGGAGCTGTATGCGAATATCAAGATTGACTCATATGAAGCCGCTCGGCGGATGGTGCGTGTTATAATAC
CCTGTGAAATGAATACCCCGACCTCGTGCTGACATCTACTGTCTCTGTAGTATCCCCAATGGACTGGCCGTCGCG
ATCGCCGCGGAATCCCCGTCTACGTCTTCCAGATCCGCCACCTGGATCACAAGGCTGTCGCCGCTTACAACTCCA
CCATGAATAGCGGTACACCCGAGACGCACAAATCATCCAAAGTTCCTGCGCGCTTGTTGAATCTCTTCGCGTTGT
ATGAGAACCTTCTGCGCTTCGTGATGCCGCTCTCCTCGGCGCTGCCACGTCCGAACCCGGAGACGCCTATCGTGA
CGTCGACCAATATCGTGGATGTCGGCGGTGTCGGGCTGAAGCAGTTCTGGAACTTGAAGGGTCACATGCAGGATG
CTAGTGTTTTGGCCACGGCGCATTACCCGGAGACATTAGATCGGATCTTTGTATGTTGCGCCCCCGTTTAATACG
TCCAGGGAGTTGAAGATAAGTTCGTGAAACTAACTCGCTGTCAGATCATCGGAGCACCCGCATTCTTTCCAACCG
TCTGGGGCTGGATCAAGCGCTGGTTTGACCCAGGAACCACCTCGAAGATCTTCATTCTCTCCGCCTCAGAGGTCA
CGCCCACTCTCAACTCCTTCATGGAGCCAACCAGCATCCCCAAGCAATTCGGTGGCGAGCTGGACTGGGCGTGGG
GCGATATGCCCAACCTGGACGAGCCCACCAGCGAGCTGCTCCGCGGCATCGAGCAACCGCTCGCCGAGGGCCAAA
AGCGGAGAGAAATCATCAAGGGACCTGTTCTGTTCAACGGCGATCACCTCCAGGTCCTAGGCACTATGGATGGAA
CGCAGACGAAGCGGAGAGAAATCGTTCCCATCCCGAAACTCCAGGCTTCGGTTGAGTCAGAGGCTAACTCCGATA
GCTCTGCAGAGAAGGCGGCGCCTAATGGCGCAGAGACTAAGGTAGACGATAGCGAGAAAACCATCGACAACGTGG
CGGTCAAAATCGACCAGTTATCCGTCGATGAGAATCATGTTTCCGTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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