Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5622.t1
Gene name
Locationscaffold_13:597092..598166
Strand+
Gene length (bp)1074
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01522 Polysacc_deac_1 Polysaccharide deacetylase 2.3E-18 41 146
PF10096 DUF2334 Uncharacterized protein conserved in bacteria (DUF2334) 6.4E-06 74 148

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5622.t1
MAPKRVLITYGVDVDAVAGWLGSYGGEDSTNDISRGYWAGTVGTQRLLKLFKKYDIKSTWFIPGHSLETFPEDMA
AVRDAGHEIGLHGYSHENPTDMSLEQQRDVLDKTYRMLTEFAGKPPRGSVAPWWETSKEGAQLLLDYGIEYDHSM
SHEDCQAYYLRTGDTWTKIDYKQKAETWMKPLEHGSETGLVEIPSNWYIDDLPPMMFIKDAPNSHGYVNPRDIED
IWRDHFDYFYREYDEFIFPITIHPDVSGRPHVLLMHERLIEHFKKHEGVEFVTMEQVCDDFKNKNAPPPGALMPA
KAGAMLEK*
Coding >Pro_DTO377G3_2|g5622.t1
ATGGCACCAAAGCGAGTTCTCATTACCTACGGTGTAGATGTTGATGCTGTAGCCGGTTGGCTAGGCTCGTATGGT
GGCGAGGATTCCACAAACGACATCAGCCGGGGATACTGGGCAGGGACAGTTGGAACCCAACGATTGTTGAAACTG
TTCAAGAAATACGATATCAAGTCAACATGGTTCATCCCCGGCCACTCCCTCGAGACCTTCCCGGAGGACATGGCC
GCAGTCCGGGACGCGGGCCACGAGATCGGCCTGCACGGGTATTCCCACGAGAACCCGACGGACATGTCTCTAGAA
CAGCAGCGTGACGTGCTGGACAAAACATACCGGATGTTGACCGAGTTCGCTGGAAAGCCTCCTCGAGGAAGCGTG
GCACCCTGGTGGGAAACTAGCAAAGAAGGAGCCCAGCTCCTCCTTGACTACGGCATCGAGTACGACCACAGCATG
AGCCACGAGGACTGCCAGGCTTACTACCTCCGAACCGGCGACACCTGGACTAAGATCGATTACAAGCAGAAAGCT
GAAACGTGGATGAAGCCTCTTGAGCATGGATCCGAAACAGGGCTTGTTGAGATCCCGTCCAACTGGTATATTGAC
GATCTACCGCCGATGATGTTCATCAAGGACGCGCCCAACAGTCATGGTTATGTCAACCCGCGGGACATTGAGGAT
ATCTGGCGCGACCATTTTGACTACTTCTACCGCGAGTACGATGAGTTTATTTTCCCAATTACTATCCACCCGGAT
GTGTCGGGAAGACCTCACGTGCTGCTGATGCATGAAAGGCTTATTGAGCATTTCAAAAAGCACGAGGGTGTTGAA
TTCGTGACAATGGAACAGGTTTGCGACGACTTCAAGAATAAGAACGCTCCTCCGCCTGGGGCCTTGATGCCCGCT
AAGGCTGGTGCGATGTTGGAGAAGTGA
Transcript >Pro_DTO377G3_2|g5622.t1
ATGGCACCAAAGCGAGTTCTCATTACCTACGGTGTAGATGTTGATGCTGTAGCCGGTTGGCTAGGCTCGTATGGT
GGCGAGGATTCCACAAACGACATCAGCCGGGGATACTGGGCAGGGACAGTTGGAACCCAACGATTGTTGAAACTG
TTCAAGAAATACGATATCAAGTCAACATGGTTCATCCCCGGCCACTCCCTCGAGACCTTCCCGGAGGACATGGCC
GCAGTCCGGGACGCGGGCCACGAGATCGGCCTGCACGGGTATTCCCACGAGAACCCGACGGACATGTCTCTAGAA
CAGCAGCGTGACGTGCTGGACAAAACATACCGGATGTTGACCGAGTTCGCTGGAAAGCCTCCTCGAGGAAGCGTG
GCACCCTGGTGGGAAACTAGCAAAGAAGGAGCCCAGCTCCTCCTTGACTACGGCATCGAGTACGACCACAGCATG
AGCCACGAGGACTGCCAGGCTTACTACCTCCGAACCGGCGACACCTGGACTAAGATCGATTACAAGCAGAAAGCT
GAAACGTGGATGAAGCCTCTTGAGCATGGATCCGAAACAGGGCTTGTTGAGATCCCGTCCAACTGGTATATTGAC
GATCTACCGCCGATGATGTTCATCAAGGACGCGCCCAACAGTCATGGTTATGTCAACCCGCGGGACATTGAGGAT
ATCTGGCGCGACCATTTTGACTACTTCTACCGCGAGTACGATGAGTTTATTTTCCCAATTACTATCCACCCGGAT
GTGTCGGGAAGACCTCACGTGCTGCTGATGCATGAAAGGCTTATTGAGCATTTCAAAAAGCACGAGGGTGTTGAA
TTCGTGACAATGGAACAGGTTTGCGACGACTTCAAGAATAAGAACGCTCCTCCGCCTGGGGCCTTGATGCCCGCT
AAGGCTGGTGCGATGTTGGAGAAGTGA
Gene >Pro_DTO377G3_2|g5622.t1
ATGGCACCAAAGCGAGTTCTCATTACCTACGGTGTAGATGTTGATGCTGTAGCCGGTTGGCTAGGCTCGTATGGT
GGCGAGGATTCCACAAACGACATCAGCCGGGGTAGGTTTCAATGTTCTTTTCTATATTCTGCTCGCTAACAATCA
ATTAGGATACTGGGCAGGGACAGTTGGAACCCAACGATTGTTGAAACTGTTCAAGAAATACGATATCAAGTCAAC
ATGGTTCATCCCCGGCCACTCCCTCGAGACCTTCCCGGAGGACATGGCCGCAGTCCGGGACGCGGGCCACGAGAT
CGGCCTGCACGGGTATTCCCACGAGAACCCGACGGACATGTCTCTAGAACAGCAGCGTGACGTGCTGGACAAAAC
ATACCGGATGTTGACCGAGTTCGCTGGAAAGCCTCCTCGAGGAAGCGTGGCACCCTGGTACGAGTCTTGAATTTA
GATTTAGCAATGGTGCTAATCAGATACAATAGGTGGGAAACTAGCAAAGAAGGAGCCCAGCTCCTCCTTGACTAC
GGCATCGAGTACGACCACAGCATGAGCCACGAGGACTGCCAGGCTTACTACCTCCGAACCGGCGACACCTGGACT
AAGATCGATTACAAGCAGAAAGCTGAAACGTGGATGAAGCCTCTTGAGCATGGATCCGAAACAGGGCTTGTTGAG
ATCCCGTCCAACTGGTATATTGACGATCTACCGCCGATGATGTTCATCAAGGACGCGCCCAACAGTCATGGTTAT
GTCAACCCGCGGGACATTGAGGATATCTGGCGCGACCATTTTGACTACTTCTACCGCGAGTACGATGAGTTTATT
TTCCCAATTACTATCCACCCGGATGTGTCGGGAAGACCTCACGTGCTGCTGATGCATGAAAGGTATGATGTGATC
ATAAATTTGTGCAGAGTAGGGCTGACATTCGATAGGCTTATTGAGCATTTCAAAAAGCACGAGGGTGTTGAATTC
GTGACAATGGAACAGGTTTGCGACGACTTCAAGAATAAGAACGCTCCTCCGCCTGGGGCCTTGATGCCCGCTAAG
GCTGGTGCGATGTTGGAGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail