Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5590.t1
Gene name
Locationscaffold_13:519798..520705
Strand+
Gene length (bp)907
Transcript length (bp)789
Coding sequence length (bp)789
Protein length (aa) 263

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 6.1E-60 16 258
PF00106 adh_short short chain dehydrogenase 1.7E-50 10 201
PF08659 KR KR domain 3.8E-16 13 167

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5590.t1
MSTNKDLAGKVAIITGSSRGIGAAIALKLAQRGADIAVNYVSNATAAESVVEQIRALDVRAIAFKADVSKEEEVK
AMFESLHREFGRLDIAVSNSGIEHFGSLSEVKGSDIDAVFAVNVKGQYFVAQQAYRFMGDYGRVILTSSISAVKG
VPRHAVYAASKAAVQGMTKCLAMDFGPRNITVNCIAAGGVKTDMYAEMSAKYIPGGDKMSPQQIDDVLSKWSPMN
RPGEVEDVAGVVSLIASPESQWLTGQTWQVSGGAYMV*
Coding >Pro_DTO377G3_2|g5590.t1
ATGTCCACGAACAAAGACCTAGCCGGCAAAGTCGCAATAATCACAGGCTCCAGCCGCGGCATCGGCGCCGCCATA
GCCCTAAAACTCGCCCAACGAGGAGCAGACATAGCCGTAAACTACGTCTCCAATGCCACGGCCGCTGAGTCCGTC
GTCGAGCAGATCCGCGCTCTTGACGTGCGCGCCATCGCCTTCAAAGCCGACGTCTCCAAGGAAGAAGAGGTGAAG
GCCATGTTCGAGAGTCTGCACCGTGAATTCGGCCGTCTGGACATCGCAGTCAGTAACTCGGGCATCGAGCATTTC
GGGAGTCTGTCTGAGGTCAAAGGCAGCGATATCGACGCTGTCTTTGCGGTTAATGTCAAGGGACAGTATTTCGTT
GCGCAGCAGGCTTATCGCTTCATGGGAGATTACGGGCGGGTTATTTTGACTTCGTCTATTTCTGCCGTTAAGGGT
GTCCCTCGTCATGCTGTCTACGCTGCTTCTAAAGCCGCTGTGCAGGGTATGACCAAGTGTCTGGCGATGGACTTT
GGTCCGCGAAACATCACGGTTAACTGCATTGCGGCTGGCGGCGTCAAGACTGATATGTATGCTGAGATGTCGGCT
AAGTATATCCCCGGCGGCGACAAGATGAGTCCGCAGCAGATTGATGATGTCTTGAGCAAGTGGTCTCCGATGAAT
CGGCCTGGGGAGGTTGAGGATGTTGCTGGGGTTGTGTCTTTGATTGCTAGCCCTGAGTCGCAGTGGTTGACTGGG
CAGACTTGGCAGGTCTCTGGTGGTGCTTATATGGTGTAG
Transcript >Pro_DTO377G3_2|g5590.t1
ATGTCCACGAACAAAGACCTAGCCGGCAAAGTCGCAATAATCACAGGCTCCAGCCGCGGCATCGGCGCCGCCATA
GCCCTAAAACTCGCCCAACGAGGAGCAGACATAGCCGTAAACTACGTCTCCAATGCCACGGCCGCTGAGTCCGTC
GTCGAGCAGATCCGCGCTCTTGACGTGCGCGCCATCGCCTTCAAAGCCGACGTCTCCAAGGAAGAAGAGGTGAAG
GCCATGTTCGAGAGTCTGCACCGTGAATTCGGCCGTCTGGACATCGCAGTCAGTAACTCGGGCATCGAGCATTTC
GGGAGTCTGTCTGAGGTCAAAGGCAGCGATATCGACGCTGTCTTTGCGGTTAATGTCAAGGGACAGTATTTCGTT
GCGCAGCAGGCTTATCGCTTCATGGGAGATTACGGGCGGGTTATTTTGACTTCGTCTATTTCTGCCGTTAAGGGT
GTCCCTCGTCATGCTGTCTACGCTGCTTCTAAAGCCGCTGTGCAGGGTATGACCAAGTGTCTGGCGATGGACTTT
GGTCCGCGAAACATCACGGTTAACTGCATTGCGGCTGGCGGCGTCAAGACTGATATGTATGCTGAGATGTCGGCT
AAGTATATCCCCGGCGGCGACAAGATGAGTCCGCAGCAGATTGATGATGTCTTGAGCAAGTGGTCTCCGATGAAT
CGGCCTGGGGAGGTTGAGGATGTTGCTGGGGTTGTGTCTTTGATTGCTAGCCCTGAGTCGCAGTGGTTGACTGGG
CAGACTTGGCAGGTCTCTGGTGGTGCTTATATGGTGTAG
Gene >Pro_DTO377G3_2|g5590.t1
ATGTCCACGAACAAAGACCTAGCCGGCAAAGTCGCAATAAGTAAGGTCTACAACCACCCCAAGAGCCAGTAGACT
AACAGCGAAACAGTCACAGGCTCCAGCCGCGGCATCGGCGCCGCCATAGCCCTAAAACTCGCCCAACGAGGAGCA
GACATAGCCGTAAACTACGTCTCCAATGCCACGGCCGCTGAGTCCGTCGTCGAGCAGATCCGCGCTCTTGACGTG
CGCGCCATCGCCTTCAAAGCCGACGTCTCCAAGGAAGAAGAGGTGAAGGCCATGTTCGAGAGTCTGCACCGTGAA
TTCGGCCGTCTGGACATCGCAGTCAGTAACTCGGGCATCGAGCATTTCGGGAGTCTGTCTGAGGTCAAAGGCAGC
GATATCGACGCTGTCTTTGCGGTTAATGTCAAGGGACAGTATTTCGTTGCGCAGCAGGCTTATCGCTTCATGGGA
GATTACGGGCGGGTTATTTTGACTTCGTCTATTTCTGCCGTTAAGGTGAGGGCTAGAGTTGTAGTTTTGGTGGTT
TGTTAGGTTGGAGACGGAGCTGACTTCTGGTCTGATTTAGGGTGTCCCTCGTCATGCTGTCTACGCTGCTTCTAA
AGCCGCTGTGCAGGGTATGACCAAGTGTCTGGCGATGGACTTTGGTCCGCGAAACATCACGGTTAACTGCATTGC
GGCTGGCGGCGTCAAGACTGATATGTATGCTGAGATGTCGGCTAAGTATATCCCCGGCGGCGACAAGATGAGTCC
GCAGCAGATTGATGATGTCTTGAGCAAGTGGTCTCCGATGAATCGGCCTGGGGAGGTTGAGGATGTTGCTGGGGT
TGTGTCTTTGATTGCTAGCCCTGAGTCGCAGTGGTTGACTGGGCAGACTTGGCAGGTCTCTGGTGGTGCTTATAT
GGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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