Protein ID | Pro_DTO377G3_2|g5586.t1 |
Gene name | |
Location | scaffold_13:506881..510078 |
Strand | + |
Gene length (bp) | 3197 |
Transcript length (bp) | 2886 |
Coding sequence length (bp) | 2886 |
Protein length (aa) | 962 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00350 | Dynamin_N | Dynamin family | 1.1E-30 | 41 | 234 |
PF01031 | Dynamin_M | Dynamin central region | 1.6E-27 | 249 | 516 |
PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | 6.1E-05 | 41 | 214 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005525 | GTP binding | Yes |
GO:0019001 | guanyl nucleotide binding | No |
GO:0036094 | small molecule binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0003674 | molecular_function | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
GO:0000166 | nucleotide binding | No |
GO:0032561 | guanyl ribonucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0043167 | ion binding | No |
GO:0005488 | binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0017076 | purine nucleotide binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 63 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5586.t1 MSSPLDENAMNQLQSEQSELLDKIDELRAIGVGGLVELPQIIVCGNQSSGKSSVLEAISRVRFPSKSNICTRFAT EIVLRRSPHDRIKVSIEPGDSRENEQERQKLRAFTSEAFSSSGDLPTLIEKAKECMGLSSADPSSVGFSDDVLKV EISGPEKPELTLVDLPGLYYSSSSEQTEQGMVIVQKLTEKYMKSSRSIILAVISARADYHIQKVLNIAQTFDPKY ERVLGIVTQPDIPEAGSEEQETYIQFIKNEKVKLQLGWHVLRNRSFETCSISDDARDAQEKDFFEKGRWASLPRD QVGIESLRHRLSKILLGHVRRNLPGLIADIQERISHNEQTLAKMGTPRTTLQEQRRFLVDISSKFARITDQALNG SYVDEFFGGFQDHTATTKESPFRRLRAVIRELNECFAEAMSIRGNRRIIQFPGQSTPVENVEQERSKPYMSDWTP QYISQESLVDEIKEQARQSRGIELPGSANQLLVGSLFRDQCEPWEAVAKSHLLNTWDSVEYFIQLVLKNLMDDQT RPLLMRHLIGPEMEKMKESLLEKLSELTSYYKRGHPLPVGTSFISKIQESRKNRQIAALKKNLQRSEFAPTGVDT FNVRDLERATSQLQSSSDQFAAAEIIDQMQAYYETAIVTFVDNVAILAIENCLLCPLEHIFTGKTVLEMNDEQIR QIAGEPSNIQKDRERLNEELEKLRKGRQTLNAFVIADSSLRARPILAGPPNPRARTPSRAGTAPIAQVAPNTRLF SRVSPAVTVPAVSSLPVVSLPVASPLPILPSSQGISDTAQGSLFRNPGNGGSLFRDPGNGESLFTGSLNSGSLFT GSLNGGSRPNNGATTTLGSFGLSPGTTSATGNVSSPTVNGTFGSNNQGSNSGSSSAPFGSSTSPTPLWKPLFNAT TAPSTLGYKPAYQERERDSNTMNYYQTLGVMLPFSSYSFEELRLGDYARMDKYLSTLPLAR* |
Coding | >Pro_DTO377G3_2|g5586.t1 ATGTCATCCCCACTTGATGAAAATGCCATGAACCAGCTACAGTCTGAACAGTCAGAACTGCTGGACAAGATTGAC GAGCTGCGCGCCATCGGAGTTGGAGGCCTTGTGGAGCTGCCTCAAATCATCGTCTGCGGCAATCAGTCCAGTGGA AAAAGCTCTGTATTGGAGGCCATCTCCAGAGTGCGCTTTCCATCCAAGAGCAATATCTGCACGCGGTTCGCGACC GAAATTGTTCTTCGCCGAAGCCCTCACGACAGGATTAAAGTATCCATCGAGCCTGGGGATTCTAGGGAGAATGAG CAGGAACGACAGAAGCTTCGAGCCTTCACCTCCGAGGCCTTTTCCTCTAGTGGGGACCTCCCCACACTGATCGAA AAAGCGAAGGAATGCATGGGCCTTTCCAGCGCCGATCCTTCGAGCGTTGGATTTAGCGACGATGTCCTCAAAGTC GAGATCTCGGGCCCTGAAAAGCCAGAGTTAACTCTAGTGGATCTCCCGGGGCTCTACTACTCCAGCAGCAGCGAA CAAACCGAGCAAGGAATGGTGATAGTCCAGAAACTGACGGAAAAGTACATGAAAAGCTCCCGGAGCATCATCCTG GCTGTCATCAGTGCAAGGGCCGATTATCATATCCAAAAGGTCTTGAACATCGCACAGACCTTTGACCCCAAATAT GAGAGGGTCTTGGGCATTGTGACGCAGCCCGATATCCCCGAAGCGGGCTCGGAGGAACAAGAAACTTATATACAG TTCATCAAAAACGAAAAAGTCAAGCTGCAACTTGGATGGCATGTACTGCGCAACCGCTCGTTTGAAACGTGCAGC ATTTCCGATGACGCTCGAGACGCTCAAGAAAAGGATTTCTTTGAAAAGGGACGGTGGGCTTCCCTTCCTCGAGAT CAAGTCGGGATCGAAAGTCTGAGGCATCGCCTCAGCAAGATTCTACTTGGTCATGTCCGTCGCAATCTTCCTGGT CTTATTGCGGACATACAAGAGAGGATTTCTCATAACGAGCAGACACTAGCAAAAATGGGCACGCCGCGCACTACT CTTCAGGAGCAACGCCGTTTCCTTGTTGATATCAGCAGCAAATTCGCGCGAATTACAGACCAGGCTTTGAATGGA TCGTACGTCGATGAGTTTTTCGGTGGATTCCAAGATCATACGGCGACCACAAAAGAGTCTCCTTTCCGCCGACTG CGGGCAGTAATCCGTGAGCTTAACGAGTGCTTTGCTGAAGCGATGAGCATTCGCGGGAACCGGCGAATCATCCAA TTCCCTGGACAGTCAACACCTGTTGAGAATGTCGAGCAAGAGAGATCCAAGCCTTATATGAGTGATTGGACACCG CAGTACATTTCCCAGGAGTCTCTTGTGGATGAGATCAAGGAACAGGCCCGACAGAGTAGGGGAATTGAGCTACCA GGTAGTGCGAACCAGCTACTTGTGGGGAGTTTGTTCCGAGACCAATGCGAGCCCTGGGAAGCAGTTGCTAAATCT CATCTGTTGAATACCTGGGATTCGGTCGAATACTTTATCCAGTTGGTCCTGAAGAACCTCATGGACGATCAGACC CGCCCGTTGCTTATGCGACACCTCATCGGACCGGAAATGGAGAAGATGAAGGAGTCTTTGTTGGAAAAGCTCAGC GAATTGACCTCGTACTATAAAAGGGGCCATCCGTTGCCTGTAGGGACATCATTTATCTCCAAGATCCAGGAGTCC AGAAAGAACCGCCAGATTGCTGCGTTGAAAAAGAACCTCCAGCGGTCTGAATTTGCCCCGACGGGAGTGGATACT TTCAATGTCCGAGATCTAGAGCGAGCGACATCTCAGCTACAGTCATCCAGCGATCAGTTTGCAGCAGCAGAGATT ATTGACCAAATGCAGGCCTACTACGAGACTGCGATCGTGACATTCGTCGACAATGTTGCCATCTTGGCTATCGAA AATTGCCTTCTTTGCCCTTTGGAGCATATCTTTACCGGCAAGACTGTACTTGAAATGAATGATGAGCAGATTCGA CAAATTGCAGGAGAGCCATCGAACATCCAGAAGGATCGGGAACGTCTGAATGAAGAGCTCGAAAAGCTCCGAAAG GGAAGGCAGACTCTCAATGCCTTCGTTATAGCGGACTCTTCGCTGCGTGCTCGTCCTATCTTGGCAGGACCGCCA AATCCCCGAGCTAGAACTCCAAGCCGTGCAGGCACGGCTCCGATAGCTCAGGTGGCGCCCAATACTCGTCTGTTC TCGCGAGTTTCACCTGCTGTCACTGTCCCTGCTGTGTCTTCTCTTCCTGTCGTGTCTCTTCCTGTCGCGTCTCCT CTCCCCATCCTTCCTTCAAGTCAAGGAATCTCTGATACAGCTCAGGGTTCTTTATTCCGAAATCCAGGGAATGGC GGATCTTTATTCCGAGACCCAGGGAATGGCGAGTCTTTATTCACAGGCTCATTGAATAGCGGATCTTTATTCACA GGCTCATTGAATGGCGGATCTAGACCTAACAATGGAGCCACCACCACGCTGGGTTCATTCGGTTTGTCACCCGGT ACAACATCGGCCACCGGGAATGTGTCTAGCCCAACGGTCAATGGGACGTTTGGTTCGAATAACCAAGGCTCTAAT TCTGGCTCGTCGTCCGCTCCTTTCGGAAGTTCGACCAGCCCAACTCCCTTGTGGAAACCTCTCTTTAACGCGACG ACAGCTCCAAGCACCTTGGGATACAAACCAGCGTATCAGGAGAGAGAGCGCGACTCAAATACAATGAACTATTAC CAAACCCTTGGCGTTATGCTTCCATTTTCTAGCTACTCCTTTGAGGAGCTTCGACTCGGAGACTACGCGCGAATG GACAAATATCTCTCGACTTTGCCATTGGCTCGTTGA |
Transcript | >Pro_DTO377G3_2|g5586.t1 ATGTCATCCCCACTTGATGAAAATGCCATGAACCAGCTACAGTCTGAACAGTCAGAACTGCTGGACAAGATTGAC GAGCTGCGCGCCATCGGAGTTGGAGGCCTTGTGGAGCTGCCTCAAATCATCGTCTGCGGCAATCAGTCCAGTGGA AAAAGCTCTGTATTGGAGGCCATCTCCAGAGTGCGCTTTCCATCCAAGAGCAATATCTGCACGCGGTTCGCGACC GAAATTGTTCTTCGCCGAAGCCCTCACGACAGGATTAAAGTATCCATCGAGCCTGGGGATTCTAGGGAGAATGAG CAGGAACGACAGAAGCTTCGAGCCTTCACCTCCGAGGCCTTTTCCTCTAGTGGGGACCTCCCCACACTGATCGAA AAAGCGAAGGAATGCATGGGCCTTTCCAGCGCCGATCCTTCGAGCGTTGGATTTAGCGACGATGTCCTCAAAGTC GAGATCTCGGGCCCTGAAAAGCCAGAGTTAACTCTAGTGGATCTCCCGGGGCTCTACTACTCCAGCAGCAGCGAA CAAACCGAGCAAGGAATGGTGATAGTCCAGAAACTGACGGAAAAGTACATGAAAAGCTCCCGGAGCATCATCCTG GCTGTCATCAGTGCAAGGGCCGATTATCATATCCAAAAGGTCTTGAACATCGCACAGACCTTTGACCCCAAATAT GAGAGGGTCTTGGGCATTGTGACGCAGCCCGATATCCCCGAAGCGGGCTCGGAGGAACAAGAAACTTATATACAG TTCATCAAAAACGAAAAAGTCAAGCTGCAACTTGGATGGCATGTACTGCGCAACCGCTCGTTTGAAACGTGCAGC ATTTCCGATGACGCTCGAGACGCTCAAGAAAAGGATTTCTTTGAAAAGGGACGGTGGGCTTCCCTTCCTCGAGAT CAAGTCGGGATCGAAAGTCTGAGGCATCGCCTCAGCAAGATTCTACTTGGTCATGTCCGTCGCAATCTTCCTGGT CTTATTGCGGACATACAAGAGAGGATTTCTCATAACGAGCAGACACTAGCAAAAATGGGCACGCCGCGCACTACT CTTCAGGAGCAACGCCGTTTCCTTGTTGATATCAGCAGCAAATTCGCGCGAATTACAGACCAGGCTTTGAATGGA TCGTACGTCGATGAGTTTTTCGGTGGATTCCAAGATCATACGGCGACCACAAAAGAGTCTCCTTTCCGCCGACTG CGGGCAGTAATCCGTGAGCTTAACGAGTGCTTTGCTGAAGCGATGAGCATTCGCGGGAACCGGCGAATCATCCAA TTCCCTGGACAGTCAACACCTGTTGAGAATGTCGAGCAAGAGAGATCCAAGCCTTATATGAGTGATTGGACACCG CAGTACATTTCCCAGGAGTCTCTTGTGGATGAGATCAAGGAACAGGCCCGACAGAGTAGGGGAATTGAGCTACCA GGTAGTGCGAACCAGCTACTTGTGGGGAGTTTGTTCCGAGACCAATGCGAGCCCTGGGAAGCAGTTGCTAAATCT CATCTGTTGAATACCTGGGATTCGGTCGAATACTTTATCCAGTTGGTCCTGAAGAACCTCATGGACGATCAGACC CGCCCGTTGCTTATGCGACACCTCATCGGACCGGAAATGGAGAAGATGAAGGAGTCTTTGTTGGAAAAGCTCAGC GAATTGACCTCGTACTATAAAAGGGGCCATCCGTTGCCTGTAGGGACATCATTTATCTCCAAGATCCAGGAGTCC AGAAAGAACCGCCAGATTGCTGCGTTGAAAAAGAACCTCCAGCGGTCTGAATTTGCCCCGACGGGAGTGGATACT TTCAATGTCCGAGATCTAGAGCGAGCGACATCTCAGCTACAGTCATCCAGCGATCAGTTTGCAGCAGCAGAGATT ATTGACCAAATGCAGGCCTACTACGAGACTGCGATCGTGACATTCGTCGACAATGTTGCCATCTTGGCTATCGAA AATTGCCTTCTTTGCCCTTTGGAGCATATCTTTACCGGCAAGACTGTACTTGAAATGAATGATGAGCAGATTCGA CAAATTGCAGGAGAGCCATCGAACATCCAGAAGGATCGGGAACGTCTGAATGAAGAGCTCGAAAAGCTCCGAAAG GGAAGGCAGACTCTCAATGCCTTCGTTATAGCGGACTCTTCGCTGCGTGCTCGTCCTATCTTGGCAGGACCGCCA AATCCCCGAGCTAGAACTCCAAGCCGTGCAGGCACGGCTCCGATAGCTCAGGTGGCGCCCAATACTCGTCTGTTC TCGCGAGTTTCACCTGCTGTCACTGTCCCTGCTGTGTCTTCTCTTCCTGTCGTGTCTCTTCCTGTCGCGTCTCCT CTCCCCATCCTTCCTTCAAGTCAAGGAATCTCTGATACAGCTCAGGGTTCTTTATTCCGAAATCCAGGGAATGGC GGATCTTTATTCCGAGACCCAGGGAATGGCGAGTCTTTATTCACAGGCTCATTGAATAGCGGATCTTTATTCACA GGCTCATTGAATGGCGGATCTAGACCTAACAATGGAGCCACCACCACGCTGGGTTCATTCGGTTTGTCACCCGGT ACAACATCGGCCACCGGGAATGTGTCTAGCCCAACGGTCAATGGGACGTTTGGTTCGAATAACCAAGGCTCTAAT TCTGGCTCGTCGTCCGCTCCTTTCGGAAGTTCGACCAGCCCAACTCCCTTGTGGAAACCTCTCTTTAACGCGACG ACAGCTCCAAGCACCTTGGGATACAAACCAGCGTATCAGGAGAGAGAGCGCGACTCAAATACAATGAACTATTAC CAAACCCTTGGCGTTATGCTTCCATTTTCTAGCTACTCCTTTGAGGAGCTTCGACTCGGAGACTACGCGCGAATG GACAAATATCTCTCGACTTTGCCATTGGCTCGTTGA |
Gene | >Pro_DTO377G3_2|g5586.t1 ATGTCATCCCCACTTGATGAAAATGCCATGAACCAGCTACAGTCTGAACAGTCAGAACTGCTGGACAAGATTGAC GAGCTGCGCGCCATCGGAGTTGGAGGCCTTGTGGAGCTGCCTCAAATCATCGTCTGCGGCAATCAGTCCAGTGGA AAAAGCTCTGTATTGGAGGCCATCTCCAGAGTGCGCTTTCCATCCAAGAGCAATATCTGCACGCGGTTCGCGACC GAAATTGTTCTTCGCCGAAGCCCTCACGACAGGATTAAAGTATCCATCGAGCCTGGGGATTCTAGGGAGAATGAG CAGGAACGACAGAAGCTTCGAGCCTTCACCTCCGAGGCCTTTTCCTCTAGTGGGGACCTCCCCACACTGATCGAA AAAGCGAAGGAATGCATGGGCCTTTCCAGCGCCGATCCTTCGAGCGTTGGATTTAGCGACGATGTCCTCAAAGTC GAGATCTCGGGCCCTGAAAAGCCAGAGTTAACTCTAGTGGATCTCCCGGGGCTCTACTACTCCAGCAGCAGCGAA CAAACCGAGCAAGGAATGGTGATAGTCCAGAAACTGACGGAAAAGTACATGAAAAGCTCCCGGAGCATCATCCTG GCTGTCATCAGTGCAAGGGCCGATTATCATATCCAAAAGGTCTTGAACATCGCACAGACCTTTGACCCCAAATAT GAGAGGGTCTTGGGCATTGTGACGCAGCCCGATATCCCCGAAGCGGGCTCGGAGGAACAAGAAACTTATATACAG TTCATCAAAAACGAAAAAGTCAAGCTGCAACTTGGATGGCATGTACTGCGCAACCGCTCGTTTGAAACGTGCAGC ATTTCCGATGACGCTCGAGACGCTCAAGAAAAGGATTTCTTTGAAAAGGGACGGTGGGCTTCCCTTCCTCGAGAT CAAGTCGGGATCGAAAGTCTGAGGCATCGCCTCAGCAAGATTCTACTTGGTCATGTCCGTCGCAATCTTCCTGGT CTTATTGCGGACATACAAGAGAGGATTTCTCATAACGAGCAGACACTAGCAAAAATGGGCACGCCGCGCACTACT CTTCAGGAGCAACGCCGTTTCCTTGTTGATATCAGCAGCAAATTCGCGCGAATTACAGACCAGGCTTTGAATGGA TCGTACGTCGATGAGTTTTTCGGTGGATTCCAAGATCATACGGCGACCACAAAAGAGTCTCCTTTCCGCCGACTG CGGGCAGTAATCCGTGAGCTTAACGAGTGCTTTGCTGAAGCGATGAGCATTCGCGGGAACCGGCGAATCATCCAA TTCCCTGGACAGTCAACACCTGTTGAGAATGTCGAGCAAGAGAGATCCAAGCCTTATATGAGTGATTGGACACCG CAGTACATTTCCCAGGAGTCTCTTGTGGATGAGATCAAGGAACAGGCCCGACAGAGTAGGGGAATTGAGCTACCA GGTAGTGCGAACCAGCTACTTGTGGGGAGTTTGTTCCGAGACCAATGCGAGCCCTGGGAAGCAGTTGCTAAATCT CATCTGTTGAATACCTGGGATTCGGTCGAATACTTTATCCAGTTGGTCCTGAAGAACCTCATGGACGATCAGACC CGCCCGTTGCTTATGCGACACCTCATCGGACCGGAAATGGAGAAGATGAAGGAGTCTTTGTTGGAAAAGCTCAGC GAATTGACCTCGTACTATAAAAGGGGCCATCCGTTGCCTGTAGGGACATCATTTATCTCCAAGATCCAGGAGTCC AGAAAGAACCGCCAGATTGCTGCGTTGAAAAAGAACCTCCAGCGGTCTGAATTTGCCCCGACGGGAGTGGATACT TTCAATGTCCGAGATCTAGAGCGAGCGACATCTCAGCTACAGTCATCCAGCGATCAGTTTGCAGCAGCAGAGATT ATTGACCAAATGCAGGCCTACTACGAGGTGAGCTAGACGTCGAAATGAGATATCGGGTAGTTCTAACAGGCCGTA TTTGCAGACTGCGATCGTGACATTCGTCGACAATGTTGCCATCTTGGCTATCGAAAATTGCCTTCTTTGCCCTTT GGAGCATATCTTTACCGGCAAGACTGTACTTGAAATGAATGATGAGCAGATTCGACAAATTGCAGGAGAGCCATC GAACATCCAGAAGGATCGGGAACGTCTGAATGAAGAGCTCGAAAAGCTCCGAAAGGGAAGGCAGACTCTCAATGC CTTCGTTATAGCGGACTCTTCGCTGCGTGCTCGTCCTATCTTGGGTACTTACATTCCATATACCGGTACATGGAA TCACAGGCTAACCGAAATATCATCTCAGCAGGACCGCCAAATCCCCGAGCTAGAACTCCAAGCCGTGCAGGCACG GCTCCGATAGCTCAGGTGGCGCCCAATACTCGTCTGTTCTCGCGAGTTTCACCTGCTGTCACTGGTAAGTAGCTC TTCAAATACCACGTCGATATGTAAAAGCTAATTTTCAAGCAGTCCCTGCTGTGTCTTCTCTTCCTGTCGTGTCTC TTCCTGTCGCGTCTCCTCTCCCCATCCTTCCTTCAAGTCAAGGAATCTCTGATACAGCTCAGGGTTCTTTATTCC GAAATCCAGGGAATGGCGGATCTTTATTCCGAGACCCAGGGAATGGCGAGTCTTTATTCACAGGCTCATTGAATA GCGGATCTTTATTCACAGGCTCATTGAATGGCGGATCTAGACCTAACAATGGAGCCACCACCACGCTGGGTTCAT TCGGTTTGTCACCCGGTACAACATCGGCCACCGGGAATGTGTCTAGCCCAACGGTCAATGGGACGTTTGGTTCGA ATAACCAAGGCTCTAATTCTGGCTCGTCGTCCGCTCCTTTCGGAAGTTCGACCAGCCCAACTCCCTTGTGGAAAC CTCTCTTTAACGCGACGACAGCTCCAAGCACCTTGGGATACAAACCAGCGTAAGTTATAGGATGCGCGGGACGGG TCCATTCTAATTATTGGTCACCTTGTATAGGTATCAGGAGAGAGAGCGCGACTCAAATACAATGAACTATTACCA AACCCTTGGCGTTATGCTTCCATTTTCTAGCTACTCCTTTGAGGTGTGTAGATCCTTTGAGTCCCTTGAGATATA GTCAACACTTAGTACTATATGTGAAGAAGGAAAGATATTGACATGAACTTGGTTAGGAGCTTCGACTCGGAGACT ACGCGCGAATGGACAAATATCTCTCGACTTTGCCATTGGCTCGTTGA |